RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 LFNGQ8NES3 379 aa17.6■□□□□ 0.41
CCDC9-204ENST00000599398 CASTOR1Q8WTX7 329 aa17.6■□□□□ 0.41
CCDC9-204ENST00000599398 TRIM64CA6NLI5 447 aa17.59■□□□□ 0.41
CCDC9-204ENST00000599398 LINC00473A8K010 186 aa17.59■□□□□ 0.41
CCDC9-204ENST00000599398 SOX15O60248 233 aa17.59■□□□□ 0.41
CCDC9-204ENST00000599398 CRYZL1O95825 349 aa17.59■□□□□ 0.41
CCDC9-204ENST00000599398 HLA-DQB1P01920 261 aa17.59■□□□□ 0.41
CCDC9-204ENST00000599398 FCER2P06734 321 aa17.59■□□□□ 0.41
CCDC9-204ENST00000599398 PTHLHP12272 177 aa17.59■□□□□ 0.41
CCDC9-204ENST00000599398 KIAA0141Q14154 515 aaPredicted RBP17.59■□□□□ 0.41
CCDC9-204ENST00000599398 UBE2NLQ5JXB2 153 aa17.59■□□□□ 0.41
CCDC9-204ENST00000599398 OR11H1Q8NG94 326 aa17.59■□□□□ 0.41
CCDC9-204ENST00000599398 OR5M8Q8NGP6 311 aa17.59■□□□□ 0.41
CCDC9-204ENST00000599398 S100A16Q96FQ6 103 aaKnown RBP17.59■□□□□ 0.41
CCDC9-204ENST00000599398 FUNDC2Q9BWH2 189 aa17.59■□□□□ 0.41
CCDC9-204ENST00000599398 IGKV1D-13A0A0B4J2D9 117 aa17.58■□□□□ 0.4
CCDC9-204ENST00000599398 TUSC2O75896 110 aa17.58■□□□□ 0.4
CCDC9-204ENST00000599398 SLC22A5O76082 557 aa17.58■□□□□ 0.4
CCDC9-204ENST00000599398 IGKV1-13P0DP09 117 aa17.58■□□□□ 0.4
CCDC9-204ENST00000599398 AKIRIN2Q53H80 203 aa17.58■□□□□ 0.4
CCDC9-204ENST00000599398 HOGA1Q86XE5 327 aa17.58■□□□□ 0.4
CCDC9-204ENST00000599398 SAMD12Q8N8I0 201 aa17.58■□□□□ 0.4
CCDC9-204ENST00000599398 DDB2Q92466 427 aa17.58■□□□□ 0.4
CCDC9-204ENST00000599398 SRRM4A7MD48 611 aaKnown RBP17.57■□□□□ 0.4
CCDC9-204ENST00000599398 ARPC1BO15143 372 aaKnown RBP17.57■□□□□ 0.4
CCDC9-204ENST00000599398 CD40LGP29965 261 aa17.57■□□□□ 0.4
CCDC9-204ENST00000599398 NCS1P62166 190 aa17.57■□□□□ 0.4
CCDC9-204ENST00000599398 PJVKQ0ZLH3 352 aa17.57■□□□□ 0.4
CCDC9-204ENST00000599398 PYHIN1Q6K0P9 492 aa17.57■□□□□ 0.4
CCDC9-204ENST00000599398 KCTD9Q7L273 389 aa17.57■□□□□ 0.4
CCDC9-204ENST00000599398 DCUN1D5Q9BTE7 237 aa17.57■□□□□ 0.4
CCDC9-204ENST00000599398 RBMX2Q9Y388 322 aaKnown RBP17.57■□□□□ 0.4
CCDC9-204ENST00000599398 PRELID3BQ9Y3B1 194 aa17.57■□□□□ 0.4
CCDC9-204ENST00000599398 MEIS3P1A6NDR6 274 aa17.56■□□□□ 0.4
CCDC9-204ENST00000599398 I3L521 148 aa17.56■□□□□ 0.4
CCDC9-204ENST00000599398 XRCC3O43542 346 aa17.56■□□□□ 0.4
CCDC9-204ENST00000599398 FCGR3BO75015 233 aa17.56■□□□□ 0.4
CCDC9-204ENST00000599398 CRYGBP07316 175 aa17.56■□□□□ 0.4
CCDC9-204ENST00000599398 CBX5P45973 191 aa17.56■□□□□ 0.4
CCDC9-204ENST00000599398 KRTAP10-11P60412 298 aa17.56■□□□□ 0.4
CCDC9-204ENST00000599398 VBP1P61758 197 aa17.56■□□□□ 0.4
CCDC9-204ENST00000599398 VMA21Q3ZAQ7 101 aa17.56■□□□□ 0.4
CCDC9-204ENST00000599398 OR2B11Q5JQS5 317 aa17.56■□□□□ 0.4
CCDC9-204ENST00000599398 OR1N2Q8NGR9 330 aa17.56■□□□□ 0.4
CCDC9-204ENST00000599398 SLC25A46Q96AG3 418 aa17.56■□□□□ 0.4
CCDC9-204ENST00000599398 MS4A10Q96PG2 267 aa17.56■□□□□ 0.4
CCDC9-204ENST00000599398 FCGR2CP31995 323 aa17.55■□□□□ 0.4
CCDC9-204ENST00000599398 RUNX1Q01196 453 aa17.55■□□□□ 0.4
CCDC9-204ENST00000599398 ZNF616Q08AN1 781 aa17.55■□□□□ 0.4
CCDC9-204ENST00000599398 FHL3Q13643 280 aa17.55■□□□□ 0.4
CCDC9-204ENST00000599398 TMEM69Q5SWH9 247 aa17.55■□□□□ 0.4
CCDC9-204ENST00000599398 OR13F1Q8NGS4 319 aa17.55■□□□□ 0.4
CCDC9-204ENST00000599398 OSR1Q8TAX0 266 aaPredicted RBP17.55■□□□□ 0.4
CCDC9-204ENST00000599398 IFT46Q9NQC8 304 aa17.55■□□□□ 0.4
CCDC9-204ENST00000599398 ZNF355PQ9NSJ1 428 aa17.55■□□□□ 0.4
CCDC9-204ENST00000599398 MRPS7Q9Y2R9 242 aaKnown RBP17.55■□□□□ 0.4
CCDC9-204ENST00000599398 TNCP24821 2201 aa17.55■□□□□ 0.4
CCDC9-204ENST00000599398 OR8U8P0C7N1 319 aa17.54■□□□□ 0.4
CCDC9-204ENST00000599398 TPPP2P59282 170 aa17.54■□□□□ 0.4
CCDC9-204ENST00000599398 UBE2KP61086 200 aa17.54■□□□□ 0.4
CCDC9-204ENST00000599398 EGFEM1PQ0D2K5 195 aa17.54■□□□□ 0.4
CCDC9-204ENST00000599398 IDO2Q6ZQW0 420 aa17.54■□□□□ 0.4
CCDC9-204ENST00000599398 SECTM1Q8WVN6 248 aa17.54■□□□□ 0.4
CCDC9-204ENST00000599398 TCTEX1D2Q8WW35 142 aa17.54■□□□□ 0.4
CCDC9-204ENST00000599398 ALX4Q9H161 411 aaPredicted RBP17.54■□□□□ 0.4
CCDC9-204ENST00000599398 IGLV2-14P01704 120 aa17.53■□□□□ 0.4
CCDC9-204ENST00000599398 IGHV3-11P01762 117 aa17.53■□□□□ 0.4
CCDC9-204ENST00000599398 SMIM18P0DKX4 95 aa17.53■□□□□ 0.4
CCDC9-204ENST00000599398 AADACP22760 399 aa17.53■□□□□ 0.4
CCDC9-204ENST00000599398 TAS2R20P59543 309 aa17.53■□□□□ 0.4
CCDC9-204ENST00000599398 RPL30P62888 115 aaKnown RBP17.53■□□□□ 0.4
CCDC9-204ENST00000599398 SSBP2P81877 361 aaPredicted RBP17.53■□□□□ 0.4
CCDC9-204ENST00000599398 TEX45Q8NA69 505 aa17.53■□□□□ 0.4
CCDC9-204ENST00000599398 OR5T1Q8NG75 326 aa17.53■□□□□ 0.4
CCDC9-204ENST00000599398 SNAPC3Q92966 411 aa17.53■□□□□ 0.4
CCDC9-204ENST00000599398 KCTD12Q96CX2 325 aaKnown RBP17.53■□□□□ 0.4
CCDC9-204ENST00000599398 HSD17B10Q99714 261 aaKnown RBP17.53■□□□□ 0.4
CCDC9-204ENST00000599398 TAS2R8Q9NYW2 309 aa17.53■□□□□ 0.4
CCDC9-204ENST00000599398 COMMD3Q9UBI1 195 aa17.53■□□□□ 0.4
CCDC9-204ENST00000599398 SEC14L6B5MCN3 397 aa17.52■□□□□ 0.4
CCDC9-204ENST00000599398 TRGV3P03979 118 aa17.52■□□□□ 0.4
CCDC9-204ENST00000599398 TNXAQ16473 311 aa17.52■□□□□ 0.4
CCDC9-204ENST00000599398 C9orf66Q5T8R8 295 aa17.52■□□□□ 0.4
CCDC9-204ENST00000599398 OR5AP2Q8NGF4 316 aa17.52■□□□□ 0.4
CCDC9-204ENST00000599398 PHB2Q99623 299 aa17.52■□□□□ 0.4
CCDC9-204ENST00000599398 SLA2Q9H6Q3 261 aa17.52■□□□□ 0.4
CCDC9-204ENST00000599398 WI2-2373I1.2A0A1W2PRP0 233 aa17.51■□□□□ 0.39
CCDC9-204ENST00000599398 K7EIL1 84 aa17.51■□□□□ 0.39
CCDC9-204ENST00000599398 PPYP01298 95 aa17.51■□□□□ 0.39
CCDC9-204ENST00000599398 LGALS1P09382 135 aaKnown RBP17.51■□□□□ 0.39
CCDC9-204ENST00000599398 FXYD4P59646 89 aa17.51■□□□□ 0.39
CCDC9-204ENST00000599398 ASPHD1Q5U4P2 390 aa17.51■□□□□ 0.39
CCDC9-204ENST00000599398 OVCH2Q7RTZ1 564 aa17.51■□□□□ 0.39
CCDC9-204ENST00000599398 POC5Q8NA72 575 aa17.51■□□□□ 0.39
CCDC9-204ENST00000599398 ACOT12Q8WYK0 555 aa17.51■□□□□ 0.39
CCDC9-204ENST00000599398 CCL28Q9NRJ3 127 aa17.51■□□□□ 0.39
CCDC9-204ENST00000599398 TNFSF12O43508 249 aa17.5■□□□□ 0.39
CCDC9-204ENST00000599398 EIF4EP06730 217 aaKnown RBP17.5■□□□□ 0.39
CCDC9-204ENST00000599398 SAA1P0DJI8 122 aaPredicted RBP17.5■□□□□ 0.39
CCDC9-204ENST00000599398 APELAP0DMC3 54 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms