RNA–Protein interactions for RNA: ENST00000589351.5

DNMT1-220, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 672 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-220ENST00000589351 EME1Q96AY2 570 aa4.31□□□□□ -1.72
DNMT1-220ENST00000589351 FLYWCH2Q96CP2 140 aaKnown RBP4.31□□□□□ -1.72
DNMT1-220ENST00000589351 HARBI1Q96MB7 349 aa4.31□□□□□ -1.72
DNMT1-220ENST00000589351 KRTAP2-2Q9BYT5 123 aa4.31□□□□□ -1.72
DNMT1-220ENST00000589351 ZNF446Q9NWS9 450 aa4.31□□□□□ -1.72
DNMT1-220ENST00000589351 IMPAD1Q9NX62 359 aa4.31□□□□□ -1.72
DNMT1-220ENST00000589351 ZNF107Q9UII5 783 aaPredicted RBP4.31□□□□□ -1.72
DNMT1-220ENST00000589351 MRPS28Q9Y2Q9 187 aaKnown RBP4.31□□□□□ -1.72
DNMT1-220ENST00000589351 TRAV24A0A0B4J272 114 aa4.3□□□□□ -1.72
DNMT1-220ENST00000589351 DPPA5A6NC42 116 aa4.3□□□□□ -1.72
DNMT1-220ENST00000589351 LINC01619G3V211 115 aa4.3□□□□□ -1.72
DNMT1-220ENST00000589351 J3QLW9 94 aa4.3□□□□□ -1.72
DNMT1-220ENST00000589351 ZNF780AO75290 641 aaPredicted RBP4.3□□□□□ -1.72
DNMT1-220ENST00000589351 OR7C1O76099 320 aaPredicted RBP4.3□□□□□ -1.72
DNMT1-220ENST00000589351 BRI3O95415 125 aa4.3□□□□□ -1.72
DNMT1-220ENST00000589351 CD2P06729 351 aa4.3□□□□□ -1.72
DNMT1-220ENST00000589351 OR8U9P0C7N5 309 aa4.3□□□□□ -1.72
DNMT1-220ENST00000589351 GP9P14770 177 aa4.3□□□□□ -1.72
DNMT1-220ENST00000589351 SPNP16150 400 aa4.3□□□□□ -1.72
DNMT1-220ENST00000589351 ZNF19P17023 458 aa4.3□□□□□ -1.72
DNMT1-220ENST00000589351 FASP25445 335 aa4.3□□□□□ -1.72
DNMT1-220ENST00000589351 SSTR5P35346 364 aa4.3□□□□□ -1.72
DNMT1-220ENST00000589351 TSPAN5P62079 268 aa4.3□□□□□ -1.72
DNMT1-220ENST00000589351 HERV-K104P63124 156 aa4.3□□□□□ -1.72
DNMT1-220ENST00000589351 MMDQ15546 238 aa4.3□□□□□ -1.72
DNMT1-220ENST00000589351 ATAD3CQ5T2N8 411 aa4.3□□□□□ -1.72
DNMT1-220ENST00000589351 C6orf183Q5T699 404 aa4.3□□□□□ -1.72
DNMT1-220ENST00000589351 RSBN1Q5VWQ0 802 aaPredicted RBP4.3□□□□□ -1.72
DNMT1-220ENST00000589351 LIPKQ5VXJ0 399 aa4.3□□□□□ -1.72
DNMT1-220ENST00000589351 MEDAGQ5VYS4 303 aa4.3□□□□□ -1.72
DNMT1-220ENST00000589351 KDM4DQ6B0I6 523 aa4.3□□□□□ -1.72
DNMT1-220ENST00000589351 ZFAND6Q6FIF0 208 aa4.3□□□□□ -1.72
DNMT1-220ENST00000589351 CD164L2Q6UWJ8 174 aa4.3□□□□□ -1.72
DNMT1-220ENST00000589351 FAM71E2Q8N5Q1 922 aa4.3□□□□□ -1.72
DNMT1-220ENST00000589351 PARP16Q8N5Y8 322 aa4.3□□□□□ -1.72
DNMT1-220ENST00000589351 Q8N6K4 173 aa4.3□□□□□ -1.72
DNMT1-220ENST00000589351 ACBD7Q8N6N7 88 aa4.3□□□□□ -1.72
DNMT1-220ENST00000589351 SUMF2Q8NBJ7 301 aa4.3□□□□□ -1.72
DNMT1-220ENST00000589351 CCDC197Q8NCU1 140 aa4.3□□□□□ -1.72
DNMT1-220ENST00000589351 OR5AK2Q8NH90 309 aa4.3□□□□□ -1.72
DNMT1-220ENST00000589351 PLPPR1Q8TBJ4 325 aa4.3□□□□□ -1.72
DNMT1-220ENST00000589351 LRRC20Q8TCA0 184 aa4.3□□□□□ -1.72
DNMT1-220ENST00000589351 TNFAIP8L1Q8WVP5 186 aa4.3□□□□□ -1.72
DNMT1-220ENST00000589351 DCUN1D4Q92564 292 aa4.3□□□□□ -1.72
DNMT1-220ENST00000589351 SLC29A1Q99808 456 aa4.3□□□□□ -1.72
DNMT1-220ENST00000589351 ZNF251Q9BRH9 671 aa4.3□□□□□ -1.72
DNMT1-220ENST00000589351 ABHD14AQ9BUJ0 271 aa4.3□□□□□ -1.72
DNMT1-220ENST00000589351 PARD6GQ9BYG4 376 aaPredicted RBP4.3□□□□□ -1.72
DNMT1-220ENST00000589351 CST11Q9H112 138 aa4.3□□□□□ -1.72
DNMT1-220ENST00000589351 METTL9Q9H1A3 318 aa4.3□□□□□ -1.72
DNMT1-220ENST00000589351 ISYNA1Q9NPH2 558 aa4.3□□□□□ -1.72
DNMT1-220ENST00000589351 PLSCR3Q9NRY6 295 aa4.3□□□□□ -1.72
DNMT1-220ENST00000589351 GNG12Q9UBI6 72 aa4.3□□□□□ -1.72
DNMT1-220ENST00000589351 ING4Q9UNL4 249 aa4.3□□□□□ -1.72
DNMT1-220ENST00000589351 ST3GAL6Q9Y274 331 aa4.3□□□□□ -1.72
DNMT1-220ENST00000589351 RBMX2Q9Y388 322 aaKnown RBP4.3□□□□□ -1.72
DNMT1-220ENST00000589351 ORC6Q9Y5N6 252 aa4.3□□□□□ -1.72
DNMT1-220ENST00000589351 TRAV41A0A0B4J266 112 aa4.29□□□□□ -1.72
DNMT1-220ENST00000589351 TCRBV3S1A0A5B6 114 aa4.29□□□□□ -1.72
DNMT1-220ENST00000589351 TMEM212A6NML5 194 aa4.29□□□□□ -1.72
DNMT1-220ENST00000589351 OR4C45A6NMZ5 311 aa4.29□□□□□ -1.72
DNMT1-220ENST00000589351 MCRIP1C9JLW8 97 aa4.29□□□□□ -1.72
DNMT1-220ENST00000589351 M0R129 80 aa4.29□□□□□ -1.72
DNMT1-220ENST00000589351 AIPO00170 330 aa4.29□□□□□ -1.72
DNMT1-220ENST00000589351 NBR2O15453 112 aa4.29□□□□□ -1.72
DNMT1-220ENST00000589351 ATP5HO75947 161 aa4.29□□□□□ -1.72
DNMT1-220ENST00000589351 RGS11O94810 467 aa4.29□□□□□ -1.72
DNMT1-220ENST00000589351 HLA-DRB1P01911 266 aa4.29□□□□□ -1.72
DNMT1-220ENST00000589351 EGR2P11161 476 aaPredicted RBP4.29□□□□□ -1.72
DNMT1-220ENST00000589351 FCGR1AP12314 374 aa4.29□□□□□ -1.72
DNMT1-220ENST00000589351 NQO2P16083 231 aa4.29□□□□□ -1.72
DNMT1-220ENST00000589351 EPHA2P29317 976 aa4.29□□□□□ -1.72
DNMT1-220ENST00000589351 VEGFCP49767 419 aa4.29□□□□□ -1.72
DNMT1-220ENST00000589351 PPP3R1P63098 170 aa4.29□□□□□ -1.72
DNMT1-220ENST00000589351 CFHR3Q02985 330 aa4.29□□□□□ -1.72
DNMT1-220ENST00000589351 ZNF85Q03923 595 aa4.29□□□□□ -1.72
DNMT1-220ENST00000589351 FGL1Q08830 312 aa4.29□□□□□ -1.72
DNMT1-220ENST00000589351 PLGLAQ15195 96 aa4.29□□□□□ -1.72
DNMT1-220ENST00000589351 ATP6AP1Q15904 470 aa4.29□□□□□ -1.72
DNMT1-220ENST00000589351 SRSF7Q16629 238 aaKnown RBP eCLIP4.29□□□□□ -1.72
DNMT1-220ENST00000589351 TATDN3Q17R31 274 aa4.29□□□□□ -1.72
DNMT1-220ENST00000589351 MPV17LQ2QL34 196 aa4.29□□□□□ -1.72
DNMT1-220ENST00000589351 MOGAT2Q3SYC2 334 aa4.29□□□□□ -1.72
DNMT1-220ENST00000589351 UTF1Q5T230 341 aa4.29□□□□□ -1.72
DNMT1-220ENST00000589351 TMEM268Q5VZI3 342 aa4.29□□□□□ -1.72
DNMT1-220ENST00000589351 RNASEKQ6P5S7 137 aaKnown RBP4.29□□□□□ -1.72
DNMT1-220ENST00000589351 SLC25A48Q6ZT89 311 aaKnown RBP4.29□□□□□ -1.72
DNMT1-220ENST00000589351 CCDC190Q86UF4 302 aa4.29□□□□□ -1.72
DNMT1-220ENST00000589351 LYPD6Q86Y78 171 aa4.29□□□□□ -1.72
DNMT1-220ENST00000589351 TCTEX1D1Q8N7M0 179 aa4.29□□□□□ -1.72
DNMT1-220ENST00000589351 TMEM104Q8NE00 496 aa4.29□□□□□ -1.72
DNMT1-220ENST00000589351 OR51A2Q8NGJ7 313 aa4.29□□□□□ -1.72
DNMT1-220ENST00000589351 OR52N1Q8NH53 320 aa4.29□□□□□ -1.72
DNMT1-220ENST00000589351 MYOZ3Q8TDC0 251 aa4.29□□□□□ -1.72
DNMT1-220ENST00000589351 CCDC107Q8WV48 283 aa4.29□□□□□ -1.72
DNMT1-220ENST00000589351 DLX4Q92988 240 aaPredicted RBP4.29□□□□□ -1.72
DNMT1-220ENST00000589351 MRPL53Q96EL3 112 aaKnown RBP4.29□□□□□ -1.72
DNMT1-220ENST00000589351 OR5B12Q96R08 314 aa4.29□□□□□ -1.72
DNMT1-220ENST00000589351 HSPB9Q9BQS6 159 aa4.29□□□□□ -1.72
DNMT1-220ENST00000589351 TM2D3Q9BRN9 247 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 302.5 ms