RNA–Protein interactions for RNA: ENST00000589050.1

RPRD1A-208, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best)

Gene RPRD1A, Length 1,022 nt, Biotype non stop decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-208ENST00000589050 POC5Q8NA72 575 aa12.35□□□□□ -0.43
RPRD1A-208ENST00000589050 OR4C13Q8NGP0 309 aa12.35□□□□□ -0.43
RPRD1A-208ENST00000589050 OR4S2Q8NH73 311 aa12.35□□□□□ -0.43
RPRD1A-208ENST00000589050 RTBDNQ9BSG5 229 aaPredicted RBP12.35□□□□□ -0.43
RPRD1A-208ENST00000589050 COPZ2Q9P299 210 aa12.35□□□□□ -0.43
RPRD1A-208ENST00000589050 TBC1D24Q9ULP9 559 aa12.35□□□□□ -0.43
RPRD1A-208ENST00000589050 VSIG4Q9Y279 399 aa12.35□□□□□ -0.43
RPRD1A-208ENST00000589050 MOB4Q9Y3A3 225 aa12.35□□□□□ -0.43
RPRD1A-208ENST00000589050 NF1P21359 2839 aa12.34□□□□□ -0.43
RPRD1A-208ENST00000589050 MPPED1O15442 326 aa12.34□□□□□ -0.43
RPRD1A-208ENST00000589050 CRYZL1O95825 349 aa12.34□□□□□ -0.43
RPRD1A-208ENST00000589050 CRYBA1P05813 215 aa12.34□□□□□ -0.43
RPRD1A-208ENST00000589050 CNTFRP26992 372 aa12.34□□□□□ -0.43
RPRD1A-208ENST00000589050 F2RL1P55085 397 aa12.34□□□□□ -0.43
RPRD1A-208ENST00000589050 RPL15P61313 204 aaKnown RBP12.34□□□□□ -0.43
RPRD1A-208ENST00000589050 ASAH1Q13510 395 aa12.34□□□□□ -0.43
RPRD1A-208ENST00000589050 RBMS2Q15434 407 aaKnown RBP12.34□□□□□ -0.43
RPRD1A-208ENST00000589050 MMDQ15546 238 aa12.34□□□□□ -0.43
RPRD1A-208ENST00000589050 SPAG16Q8N0X2 631 aa12.34□□□□□ -0.43
RPRD1A-208ENST00000589050 ZFAND2BQ8WV99 257 aa12.34□□□□□ -0.43
RPRD1A-208ENST00000589050 RNF5Q99942 180 aa12.34□□□□□ -0.43
RPRD1A-208ENST00000589050 SLC25A21Q9BQT8 299 aaPredicted RBP12.34□□□□□ -0.43
RPRD1A-208ENST00000589050 C5orf66Q9H5L9 145 aa12.34□□□□□ -0.43
RPRD1A-208ENST00000589050 LIN7CQ9NUP9 197 aaKnown RBP12.34□□□□□ -0.43
RPRD1A-208ENST00000589050 C1RLQ9NZP8 487 aa12.34□□□□□ -0.43
RPRD1A-208ENST00000589050 CUBNO60494 3623 aa12.34□□□□□ -0.43
RPRD1A-208ENST00000589050 SHOXO15266 292 aa12.33□□□□□ -0.44
RPRD1A-208ENST00000589050 NBR2O15453 112 aa12.33□□□□□ -0.44
RPRD1A-208ENST00000589050 RAMP3O60896 148 aa12.33□□□□□ -0.44
RPRD1A-208ENST00000589050 NDUFB6O95139 128 aa12.33□□□□□ -0.44
RPRD1A-208ENST00000589050 F2RP25116 425 aa12.33□□□□□ -0.44
RPRD1A-208ENST00000589050 BRWD1-AS2P59051 145 aa12.33□□□□□ -0.44
RPRD1A-208ENST00000589050 TMEM177Q53S58 311 aa12.33□□□□□ -0.44
RPRD1A-208ENST00000589050 MZT2BQ6NZ67 158 aa12.33□□□□□ -0.44
RPRD1A-208ENST00000589050 ADAD2Q8NCV1 583 aaKnown RBP12.33□□□□□ -0.44
RPRD1A-208ENST00000589050 OR8H1Q8NGG4 311 aa12.33□□□□□ -0.44
RPRD1A-208ENST00000589050 CD300LFQ8TDQ1 290 aa12.33□□□□□ -0.44
RPRD1A-208ENST00000589050 HARBI1Q96MB7 349 aa12.33□□□□□ -0.44
RPRD1A-208ENST00000589050 TSNAXQ99598 290 aaKnown RBP12.33□□□□□ -0.44
RPRD1A-208ENST00000589050 NPFFR1Q9GZQ6 430 aa12.33□□□□□ -0.44
RPRD1A-208ENST00000589050 PLSCR3Q9NRY6 295 aa12.33□□□□□ -0.44
RPRD1A-208ENST00000589050 TEX13DA0A0J9YY54 714 aaPredicted RBP12.32□□□□□ -0.44
RPRD1A-208ENST00000589050 M0QZK8 103 aa12.32□□□□□ -0.44
RPRD1A-208ENST00000589050 RBFOX2O43251 390 aaKnown RBP eCLIP12.32□□□□□ -0.44
RPRD1A-208ENST00000589050 FGF16O43320 207 aa12.32□□□□□ -0.44
RPRD1A-208ENST00000589050 RIPPLY3P57055 190 aa12.32□□□□□ -0.44
RPRD1A-208ENST00000589050 TMED4Q7Z7H5 227 aa12.32□□□□□ -0.44
RPRD1A-208ENST00000589050 TCTEX1D1Q8N7M0 179 aa12.32□□□□□ -0.44
RPRD1A-208ENST00000589050 C5orf56Q8N8D9 126 aa12.32□□□□□ -0.44
RPRD1A-208ENST00000589050 Q8N9W7 124 aa12.32□□□□□ -0.44
RPRD1A-208ENST00000589050 NPBQ8NG41 125 aa12.32□□□□□ -0.44
RPRD1A-208ENST00000589050 OSR1Q8TAX0 266 aaPredicted RBP12.32□□□□□ -0.44
RPRD1A-208ENST00000589050 TAF15Q92804 592 aaKnown RBP eCLIP12.32□□□□□ -0.44
RPRD1A-208ENST00000589050 KIAA1456Q9P272 454 aa12.32□□□□□ -0.44
RPRD1A-208ENST00000589050 ZFHX3Q15911 3703 aa12.31□□□□□ -0.44
RPRD1A-208ENST00000589050 SH2D7A6NKC9 451 aaPredicted RBP12.31□□□□□ -0.44
RPRD1A-208ENST00000589050 AMY1AP04745 511 aa12.31□□□□□ -0.44
RPRD1A-208ENST00000589050 AKR1C4P17516 323 aa12.31□□□□□ -0.44
RPRD1A-208ENST00000589050 LGALS7P47929 136 aa12.31□□□□□ -0.44
RPRD1A-208ENST00000589050 DEFA1P59665 94 aa12.31□□□□□ -0.44
RPRD1A-208ENST00000589050 DEFA3P59666 94 aa12.31□□□□□ -0.44
RPRD1A-208ENST00000589050 BLCAPP62952 87 aa12.31□□□□□ -0.44
RPRD1A-208ENST00000589050 PLGLAQ15195 96 aa12.31□□□□□ -0.44
RPRD1A-208ENST00000589050 PSG5Q15238 335 aa12.31□□□□□ -0.44
RPRD1A-208ENST00000589050 C11orf88Q6PI97 169 aa12.31□□□□□ -0.44
RPRD1A-208ENST00000589050 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.31□□□□□ -0.44
RPRD1A-208ENST00000589050 RASL11BQ9BPW5 248 aa12.31□□□□□ -0.44
RPRD1A-208ENST00000589050 NAA60Q9H7X0 242 aa12.31□□□□□ -0.44
RPRD1A-208ENST00000589050 C3orf85A0A1B0GTC6 90 aa12.3□□□□□ -0.44
RPRD1A-208ENST00000589050 FAM240BA0A1B0GVZ2 78 aa12.3□□□□□ -0.44
RPRD1A-208ENST00000589050 CRYM-AS1A6NIL9 109 aa12.3□□□□□ -0.44
RPRD1A-208ENST00000589050 SRRM4A7MD48 611 aaKnown RBP12.3□□□□□ -0.44
RPRD1A-208ENST00000589050 H0Y980 276 aa12.3□□□□□ -0.44
RPRD1A-208ENST00000589050 RRHO14718 337 aa12.3□□□□□ -0.44
RPRD1A-208ENST00000589050 SLC25A17O43808 307 aa12.3□□□□□ -0.44
RPRD1A-208ENST00000589050 S1PR2O95136 353 aa12.3□□□□□ -0.44
RPRD1A-208ENST00000589050 NDUFA3O95167 84 aa12.3□□□□□ -0.44
RPRD1A-208ENST00000589050 SPDEFO95238 335 aa12.3□□□□□ -0.44
RPRD1A-208ENST00000589050 HPRT1P00492 218 aa12.3□□□□□ -0.44
RPRD1A-208ENST00000589050 IGLV2-23P01705 113 aa12.3□□□□□ -0.44
RPRD1A-208ENST00000589050 VSIG10L2P0DP72 767 aa12.3□□□□□ -0.44
RPRD1A-208ENST00000589050 SLC6A1P30531 599 aa12.3□□□□□ -0.44
RPRD1A-208ENST00000589050 LPAR6P43657 344 aa12.3□□□□□ -0.44
RPRD1A-208ENST00000589050 C9orf152Q5JTZ5 239 aa12.3□□□□□ -0.44
RPRD1A-208ENST00000589050 SGPP2Q8IWX5 399 aa12.3□□□□□ -0.44
RPRD1A-208ENST00000589050 CENPSQ8N2Z9 138 aa12.3□□□□□ -0.44
RPRD1A-208ENST00000589050 FAM71E2Q8N5Q1 922 aa12.3□□□□□ -0.44
RPRD1A-208ENST00000589050 TMEM230Q96A57 120 aa12.3□□□□□ -0.44
RPRD1A-208ENST00000589050 TP53RKQ96S44 253 aa12.3□□□□□ -0.44
RPRD1A-208ENST00000589050 FBXL15Q9H469 300 aa12.3□□□□□ -0.44
RPRD1A-208ENST00000589050 RANBP3Q9H6Z4 567 aaPredicted RBP12.3□□□□□ -0.44
RPRD1A-208ENST00000589050 FAM212BQ9NTI7 297 aaPredicted RBP12.3□□□□□ -0.44
RPRD1A-208ENST00000589050 METTL1Q9UBP6 276 aaKnown RBP12.3□□□□□ -0.44
RPRD1A-208ENST00000589050 FLVCR2Q9UPI3 526 aa12.3□□□□□ -0.44
RPRD1A-208ENST00000589050 ARPC1BO15143 372 aaKnown RBP12.29□□□□□ -0.44
RPRD1A-208ENST00000589050 HRASP01112 189 aa12.29□□□□□ -0.44
RPRD1A-208ENST00000589050 SERPINE2P07093 398 aa12.29□□□□□ -0.44
RPRD1A-208ENST00000589050 RELBQ01201 579 aa12.29□□□□□ -0.44
RPRD1A-208ENST00000589050 C5orf64Q2M2E5 130 aa12.29□□□□□ -0.44
RPRD1A-208ENST00000589050 KRTAP24-1Q3LI83 254 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms