RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 ARPC1AQ92747 370 aa11.6□□□□□ -0.55
ATG4D-207ENST00000587256 CMTM3Q96MX0 182 aa11.6□□□□□ -0.55
ATG4D-207ENST00000587256 FAM103A1Q9BTL3 118 aaKnown RBP11.6□□□□□ -0.55
ATG4D-207ENST00000587256 EHFQ9NZC4 300 aa11.6□□□□□ -0.55
ATG4D-207ENST00000587256 PRELID3BQ9Y3B1 194 aa11.6□□□□□ -0.55
ATG4D-207ENST00000587256 NOTCH3Q9UM47 2321 aa11.59□□□□□ -0.55
ATG4D-207ENST00000587256 PLXNB1O43157 2135 aa11.59□□□□□ -0.55
ATG4D-207ENST00000587256 HPGDSO60760 199 aa11.59□□□□□ -0.55
ATG4D-207ENST00000587256 FCGR3BO75015 233 aa11.59□□□□□ -0.55
ATG4D-207ENST00000587256 IGLV2-23P01705 113 aa11.59□□□□□ -0.55
ATG4D-207ENST00000587256 ZNF182P17025 639 aaPredicted RBP11.59□□□□□ -0.55
ATG4D-207ENST00000587256 ELK1P19419 428 aa11.59□□□□□ -0.55
ATG4D-207ENST00000587256 PSMB8P28062 276 aa11.59□□□□□ -0.55
ATG4D-207ENST00000587256 PPIFP30405 207 aaKnown RBP11.59□□□□□ -0.55
ATG4D-207ENST00000587256 FXYD4P59646 89 aa11.59□□□□□ -0.55
ATG4D-207ENST00000587256 HERV-K104P61576 105 aa11.59□□□□□ -0.55
ATG4D-207ENST00000587256 TMEM267Q0VDI3 215 aaPredicted RBP11.59□□□□□ -0.55
ATG4D-207ENST00000587256 VMA21Q3ZAQ7 101 aa11.59□□□□□ -0.55
ATG4D-207ENST00000587256 OXLD1Q5BKU9 147 aa11.59□□□□□ -0.55
ATG4D-207ENST00000587256 UNQ5815/PRO19632Q6UWF5 114 aa11.59□□□□□ -0.55
ATG4D-207ENST00000587256 ZNF562Q6V9R5 426 aa11.59□□□□□ -0.55
ATG4D-207ENST00000587256 TMEM17Q86X19 198 aa11.59□□□□□ -0.55
ATG4D-207ENST00000587256 SNX29P2Q8IUI4 249 aa11.59□□□□□ -0.55
ATG4D-207ENST00000587256 TCTEX1D1Q8N7M0 179 aa11.59□□□□□ -0.55
ATG4D-207ENST00000587256 HSD17B10Q99714 261 aaKnown RBP11.59□□□□□ -0.55
ATG4D-207ENST00000587256 DCUN1D5Q9BTE7 237 aa11.59□□□□□ -0.55
ATG4D-207ENST00000587256 TAS2R8Q9NYW2 309 aa11.59□□□□□ -0.55
ATG4D-207ENST00000587256 FOXA2Q9Y261 457 aaPredicted RBP11.59□□□□□ -0.55
ATG4D-207ENST00000587256 WIPF1O43516 503 aa11.58□□□□□ -0.56
ATG4D-207ENST00000587256 NOL3O60936 208 aaKnown RBP11.58□□□□□ -0.56
ATG4D-207ENST00000587256 CNIH1O95406 144 aa11.58□□□□□ -0.56
ATG4D-207ENST00000587256 IGLL1P15814 213 aa11.58□□□□□ -0.56
ATG4D-207ENST00000587256 MYCNOSP40205 109 aa11.58□□□□□ -0.56
ATG4D-207ENST00000587256 CDX1P47902 265 aaPredicted RBP11.58□□□□□ -0.56
ATG4D-207ENST00000587256 CRIP2P52943 208 aaPredicted RBP11.58□□□□□ -0.56
ATG4D-207ENST00000587256 RAB25P57735 213 aa11.58□□□□□ -0.56
ATG4D-207ENST00000587256 TAS2R46P59540 309 aa11.58□□□□□ -0.56
ATG4D-207ENST00000587256 FXYD3Q14802 87 aa11.58□□□□□ -0.56
ATG4D-207ENST00000587256 DEFB136Q30KP8 78 aa11.58□□□□□ -0.56
ATG4D-207ENST00000587256 BEAN1Q3B7T3 259 aa11.58□□□□□ -0.56
ATG4D-207ENST00000587256 OVCH2Q7RTZ1 564 aa11.58□□□□□ -0.56
ATG4D-207ENST00000587256 MRPL41Q8IXM3 137 aaKnown RBP11.58□□□□□ -0.56
ATG4D-207ENST00000587256 LINC00482Q8N8I6 264 aa11.58□□□□□ -0.56
ATG4D-207ENST00000587256 MINDY2Q8NBR6 621 aa11.58□□□□□ -0.56
ATG4D-207ENST00000587256 OR5H2Q8NGV7 314 aa11.58□□□□□ -0.56
ATG4D-207ENST00000587256 OR4S2Q8NH73 311 aa11.58□□□□□ -0.56
ATG4D-207ENST00000587256 OSR1Q8TAX0 266 aaPredicted RBP11.58□□□□□ -0.56
ATG4D-207ENST00000587256 C4orf3Q8WVX3 66 aa11.58□□□□□ -0.56
ATG4D-207ENST00000587256 DUX3Q96PT4 197 aa11.58□□□□□ -0.56
ATG4D-207ENST00000587256 SLC5A7Q9GZV3 580 aa11.58□□□□□ -0.56
ATG4D-207ENST00000587256 CCL28Q9NRJ3 127 aa11.58□□□□□ -0.56
ATG4D-207ENST00000587256 TNFSF12O43508 249 aa11.57□□□□□ -0.56
ATG4D-207ENST00000587256 IGLV1-40P01703 118 aa11.57□□□□□ -0.56
ATG4D-207ENST00000587256 IGLV2-14P01704 120 aa11.57□□□□□ -0.56
ATG4D-207ENST00000587256 UBE2KP61086 200 aa11.57□□□□□ -0.56
ATG4D-207ENST00000587256 RPL30P62888 115 aaKnown RBP11.57□□□□□ -0.56
ATG4D-207ENST00000587256 PJVKQ0ZLH3 352 aa11.57□□□□□ -0.56
ATG4D-207ENST00000587256 ACTBL2Q562R1 376 aa11.57□□□□□ -0.56
ATG4D-207ENST00000587256 C19orf54Q5BKX5 351 aa11.57□□□□□ -0.56
ATG4D-207ENST00000587256 ZNF66Q6ZN08 573 aa11.57□□□□□ -0.56
ATG4D-207ENST00000587256 LFNGQ8NES3 379 aa11.57□□□□□ -0.56
ATG4D-207ENST00000587256 WFDC9Q8NEX5 89 aa11.57□□□□□ -0.56
ATG4D-207ENST00000587256 RAB2BQ8WUD1 216 aa11.57□□□□□ -0.56
ATG4D-207ENST00000587256 RCC1LQ96I51 464 aaKnown RBP11.57□□□□□ -0.56
ATG4D-207ENST00000587256 RAX2Q96IS3 184 aa11.57□□□□□ -0.56
ATG4D-207ENST00000587256 KLK15Q9H2R5 256 aa11.57□□□□□ -0.56
ATG4D-207ENST00000587256 SCPEP1Q9HB40 452 aa11.57□□□□□ -0.56
ATG4D-207ENST00000587256 ANAPC10Q9UM13 185 aa11.57□□□□□ -0.56
ATG4D-207ENST00000587256 SRRM4A7MD48 611 aaKnown RBP11.56□□□□□ -0.56
ATG4D-207ENST00000587256 CCL24O00175 119 aa11.56□□□□□ -0.56
ATG4D-207ENST00000587256 ARPC1BO15143 372 aaKnown RBP11.56□□□□□ -0.56
ATG4D-207ENST00000587256 CREBL2O60519 120 aaPredicted RBP11.56□□□□□ -0.56
ATG4D-207ENST00000587256 PMP2P02689 132 aa11.56□□□□□ -0.56
ATG4D-207ENST00000587256 SAA1P0DJI8 122 aaPredicted RBP11.56□□□□□ -0.56
ATG4D-207ENST00000587256 CD40LGP29965 261 aa11.56□□□□□ -0.56
ATG4D-207ENST00000587256 RPL5P46777 297 aaKnown RBP11.56□□□□□ -0.56
ATG4D-207ENST00000587256 SPCS2Q15005 226 aa11.56□□□□□ -0.56
ATG4D-207ENST00000587256 MSMO1Q15800 293 aa11.56□□□□□ -0.56
ATG4D-207ENST00000587256 KPRPQ5T749 579 aaPredicted RBP11.56□□□□□ -0.56
ATG4D-207ENST00000587256 PYHIN1Q6K0P9 492 aa11.56□□□□□ -0.56
ATG4D-207ENST00000587256 IDO2Q6ZQW0 420 aa11.56□□□□□ -0.56
ATG4D-207ENST00000587256 OR5M8Q8NGP6 311 aa11.56□□□□□ -0.56
ATG4D-207ENST00000587256 MYOZ3Q8TDC0 251 aa11.56□□□□□ -0.56
ATG4D-207ENST00000587256 GPX8Q8TED1 209 aa11.56□□□□□ -0.56
ATG4D-207ENST00000587256 CASTOR1Q8WTX7 329 aa11.56□□□□□ -0.56
ATG4D-207ENST00000587256 GIMAP1Q8WWP7 306 aa11.56□□□□□ -0.56
ATG4D-207ENST00000587256 UBE2E2Q96LR5 201 aa11.56□□□□□ -0.56
ATG4D-207ENST00000587256 OR5B12Q96R08 314 aa11.56□□□□□ -0.56
ATG4D-207ENST00000587256 P2RX4Q99571 388 aa11.56□□□□□ -0.56
ATG4D-207ENST00000587256 VSIG4Q9Y279 399 aa11.56□□□□□ -0.56
ATG4D-207ENST00000587256 NUBP2Q9Y5Y2 271 aa11.56□□□□□ -0.56
ATG4D-207ENST00000587256 RGS5O15539 181 aa11.55□□□□□ -0.56
ATG4D-207ENST00000587256 SOX15O60248 233 aa11.55□□□□□ -0.56
ATG4D-207ENST00000587256 DUS4LO95620 317 aaKnown RBP11.55□□□□□ -0.56
ATG4D-207ENST00000587256 CRYGBP07316 175 aa11.55□□□□□ -0.56
ATG4D-207ENST00000587256 EGR2P11161 476 aaPredicted RBP11.55□□□□□ -0.56
ATG4D-207ENST00000587256 NAT1P18440 290 aa11.55□□□□□ -0.56
ATG4D-207ENST00000587256 HLA-DMAP28067 261 aa11.55□□□□□ -0.56
ATG4D-207ENST00000587256 RCVRNP35243 200 aa11.55□□□□□ -0.56
ATG4D-207ENST00000587256 HRH1P35367 487 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 151.1 ms