RNA–Protein interactions for RNA: ENST00000573600.5

CTDNEP1-208, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTDNEP1, Length 1,724 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-208ENST00000573600 PCNPQ8WW12 178 aaKnown RBP23.81■■□□□ 1.4
CTDNEP1-208ENST00000573600 TMEM186Q96B77 213 aa23.81■■□□□ 1.4
CTDNEP1-208ENST00000573600 TMEM133Q9H2Q1 129 aa23.81■■□□□ 1.4
CTDNEP1-208ENST00000573600 UBE2KP61086 200 aa23.8■■□□□ 1.4
CTDNEP1-208ENST00000573600 GNB2P62879 340 aa23.8■■□□□ 1.4
CTDNEP1-208ENST00000573600 CLEC9AQ6UXN8 241 aa23.8■■□□□ 1.4
CTDNEP1-208ENST00000573600 PDZD9Q8IXQ8 264 aa23.8■■□□□ 1.4
CTDNEP1-208ENST00000573600 OR10X1Q8NGY0 326 aa23.8■■□□□ 1.4
CTDNEP1-208ENST00000573600 SMIM8Q96KF7 97 aa23.8■■□□□ 1.4
CTDNEP1-208ENST00000573600 hCG_1809904A0A1W2PP81 198 aa23.79■■□□□ 1.4
CTDNEP1-208ENST00000573600 A0A1W2PPE2 198 aa23.79■■□□□ 1.4
CTDNEP1-208ENST00000573600 A0A1W2PR64 198 aa23.79■■□□□ 1.4
CTDNEP1-208ENST00000573600 A0A1W2PRV1 198 aa23.79■■□□□ 1.4
CTDNEP1-208ENST00000573600 OVOL3O00110 214 aa23.79■■□□□ 1.4
CTDNEP1-208ENST00000573600 CT45A6P0DMU7 189 aa23.79■■□□□ 1.4
CTDNEP1-208ENST00000573600 CT45A5P0DMU8 189 aa23.79■■□□□ 1.4
CTDNEP1-208ENST00000573600 CT45A7P0DMV0 189 aa23.79■■□□□ 1.4
CTDNEP1-208ENST00000573600 TAGLNQ01995 201 aaKnown RBP23.79■■□□□ 1.4
CTDNEP1-208ENST00000573600 LY6G5BQ8NDX9 201 aa23.79■■□□□ 1.4
CTDNEP1-208ENST00000573600 LRRC20Q8TCA0 184 aa23.79■■□□□ 1.4
CTDNEP1-208ENST00000573600 TNFRSF14Q92956 283 aa23.79■■□□□ 1.4
CTDNEP1-208ENST00000573600 BSCL2Q96G97 398 aaPredicted RBP23.79■■□□□ 1.4
CTDNEP1-208ENST00000573600 AUP1Q9Y679 476 aa23.79■■□□□ 1.4
CTDNEP1-208ENST00000573600 RTL8BQ17RB0 113 aa23.79■■□□□ 1.4
CTDNEP1-208ENST00000573600 DHRS7BQ6IAN0 325 aaPredicted RBP23.79■■□□□ 1.4
CTDNEP1-208ENST00000573600 ABHD12Q8N2K0 398 aa23.79■■□□□ 1.4
CTDNEP1-208ENST00000573600 LIPFP07098 398 aa23.78■■□□□ 1.4
CTDNEP1-208ENST00000573600 RNF224P0DH78 156 aa23.78■■□□□ 1.4
CTDNEP1-208ENST00000573600 PSENENQ9NZ42 101 aa23.78■■□□□ 1.4
CTDNEP1-208ENST00000573600 ZNRD1Q9P1U0 126 aa23.78■■□□□ 1.4
CTDNEP1-208ENST00000573600 CACFD1Q9UGQ2 172 aa23.78■■□□□ 1.4
CTDNEP1-208ENST00000573600 HRNRQ86YZ3 2850 aaPredicted RBP23.77■■□□□ 1.4
CTDNEP1-208ENST00000573600 TXNL1O43396 289 aa23.77■■□□□ 1.4
CTDNEP1-208ENST00000573600 CRYZL1O95825 349 aa23.77■■□□□ 1.4
CTDNEP1-208ENST00000573600 IL3RAP26951 378 aa23.77■■□□□ 1.4
CTDNEP1-208ENST00000573600 ZNF137PP52743 207 aa23.77■■□□□ 1.4
CTDNEP1-208ENST00000573600 STX12Q86Y82 276 aa23.77■■□□□ 1.4
CTDNEP1-208ENST00000573600 ZNF295-AS1Q8N0V1 137 aa23.77■■□□□ 1.4
CTDNEP1-208ENST00000573600 SSBP3Q9BWW4 388 aaPredicted RBP23.77■■□□□ 1.4
CTDNEP1-208ENST00000573600 RBKSQ9H477 322 aa23.77■■□□□ 1.4
CTDNEP1-208ENST00000573600 NDUFS7O75251 213 aa23.76■■□□□ 1.39
CTDNEP1-208ENST00000573600 RBMXL2O75526 392 aaKnown RBP23.76■■□□□ 1.39
CTDNEP1-208ENST00000573600 HRASP01112 189 aa23.76■■□□□ 1.39
CTDNEP1-208ENST00000573600 RRASP10301 218 aa23.76■■□□□ 1.39
CTDNEP1-208ENST00000573600 AARDQ4LEZ3 155 aa23.76■■□□□ 1.39
CTDNEP1-208ENST00000573600 FAM74A1Q5RGS3 127 aa23.76■■□□□ 1.39
CTDNEP1-208ENST00000573600 WFDC1Q9HC57 220 aa23.76■■□□□ 1.39
CTDNEP1-208ENST00000573600 SLC35D1Q9NTN3 355 aa23.76■■□□□ 1.39
CTDNEP1-208ENST00000573600 IAPPP10997 89 aa23.76■■□□□ 1.39
CTDNEP1-208ENST00000573600 ZNF266Q14584 549 aa23.76■■□□□ 1.39
CTDNEP1-208ENST00000573600 OR4A16Q8NH70 328 aa23.76■■□□□ 1.39
CTDNEP1-208ENST00000573600 ARV1Q9H2C2 271 aa23.76■■□□□ 1.39
CTDNEP1-208ENST00000573600 MED9Q9NWA0 146 aa23.76■■□□□ 1.39
CTDNEP1-208ENST00000573600 APOA2P02652 100 aa23.75■■□□□ 1.39
CTDNEP1-208ENST00000573600 OR9G9P0C7N8 305 aa23.75■■□□□ 1.39
CTDNEP1-208ENST00000573600 SULT1A1P50225 295 aa23.75■■□□□ 1.39
CTDNEP1-208ENST00000573600 PRRX1P54821 245 aa23.75■■□□□ 1.39
CTDNEP1-208ENST00000573600 POU2AF1Q16633 256 aa23.75■■□□□ 1.39
CTDNEP1-208ENST00000573600 SSX9Q7RTT3 188 aa23.75■■□□□ 1.39
CTDNEP1-208ENST00000573600 TMED6Q8WW62 240 aa23.75■■□□□ 1.39
CTDNEP1-208ENST00000573600 AIFM2Q9BRQ8 373 aa23.75■■□□□ 1.39
CTDNEP1-208ENST00000573600 KMT2BQ9UMN6 2715 aaPredicted RBP23.75■■□□□ 1.39
CTDNEP1-208ENST00000573600 RNF141Q8WVD5 230 aa23.74■■□□□ 1.39
CTDNEP1-208ENST00000573600 ST6GALNAC6Q969X2 333 aa23.74■■□□□ 1.39
CTDNEP1-208ENST00000573600 CIB3Q96Q77 187 aaPredicted RBP23.74■■□□□ 1.39
CTDNEP1-208ENST00000573600 TMEM140Q9NV12 185 aa23.74■■□□□ 1.39
CTDNEP1-208ENST00000573600 MALRD1Q5VYJ5 2156 aa23.74■■□□□ 1.39
CTDNEP1-208ENST00000573600 OR5C1Q8NGR4 320 aa23.73■■□□□ 1.39
CTDNEP1-208ENST00000573600 IGFBPL1Q8WX77 278 aa23.73■■□□□ 1.39
CTDNEP1-208ENST00000573600 MRPL20Q9BYC9 149 aaKnown RBP23.73■■□□□ 1.39
CTDNEP1-208ENST00000573600 IGHV2-26A0A0B4J1V2 119 aa23.73■■□□□ 1.39
CTDNEP1-208ENST00000573600 LEUTXA8MZ59 168 aa23.73■■□□□ 1.39
CTDNEP1-208ENST00000573600 C22orf46C9J442 243 aa23.73■■□□□ 1.39
CTDNEP1-208ENST00000573600 CST7O76096 145 aa23.73■■□□□ 1.39
CTDNEP1-208ENST00000573600 LY86O95711 162 aa23.73■■□□□ 1.39
CTDNEP1-208ENST00000573600 COMMD7Q86VX2 200 aa23.73■■□□□ 1.39
CTDNEP1-208ENST00000573600 RHOVQ96L33 236 aa23.73■■□□□ 1.39
CTDNEP1-208ENST00000573600 GINS3Q9BRX5 216 aa23.73■■□□□ 1.39
CTDNEP1-208ENST00000573600 CLEC7AQ9BXN2 247 aa23.73■■□□□ 1.39
CTDNEP1-208ENST00000573600 LOC105371242A0A075B767 164 aa23.72■■□□□ 1.39
CTDNEP1-208ENST00000573600 H3BP45 60 aa23.72■■□□□ 1.39
CTDNEP1-208ENST00000573600 DYNLT3P51808 116 aa23.72■■□□□ 1.39
CTDNEP1-208ENST00000573600 OR5AN1Q8NGI8 311 aa23.72■■□□□ 1.39
CTDNEP1-208ENST00000573600 OR1S2Q8NGQ3 325 aa23.72■■□□□ 1.39
CTDNEP1-208ENST00000573600 OR52E5Q8NH55 327 aa23.72■■□□□ 1.39
CTDNEP1-208ENST00000573600 PCGF1Q9BSM1 259 aa23.72■■□□□ 1.39
CTDNEP1-208ENST00000573600 NARFLQ9H6Q4 476 aa23.72■■□□□ 1.39
CTDNEP1-208ENST00000573600 FGF16O43320 207 aa23.71■■□□□ 1.39
CTDNEP1-208ENST00000573600 RELBQ01201 579 aa23.71■■□□□ 1.39
CTDNEP1-208ENST00000573600 VKORC1L1Q8N0U8 176 aa23.71■■□□□ 1.39
CTDNEP1-208ENST00000573600 BEND2Q8NDZ0 799 aa23.71■■□□□ 1.39
CTDNEP1-208ENST00000573600 OR13D1Q8NGV5 346 aa23.71■■□□□ 1.39
CTDNEP1-208ENST00000573600 DTD1Q8TEA8 209 aa23.71■■□□□ 1.39
CTDNEP1-208ENST00000573600 CITED4Q96RK1 184 aa23.71■■□□□ 1.39
CTDNEP1-208ENST00000573600 QTRT1Q9BXR0 403 aaKnown RBP23.71■■□□□ 1.39
CTDNEP1-208ENST00000573600 ONECUT1Q9UBC0 465 aa23.71■■□□□ 1.39
CTDNEP1-208ENST00000573600 PFDN2Q9UHV9 154 aa23.71■■□□□ 1.39
CTDNEP1-208ENST00000573600 CLINT1Q14677 625 aa23.7■■□□□ 1.39
CTDNEP1-208ENST00000573600 OSR1Q8TAX0 266 aaPredicted RBP23.7■■□□□ 1.39
CTDNEP1-208ENST00000573600 CXorf58Q96LI9 332 aa23.7■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms