RNA–Protein interactions for RNA: ENST00000567060.5

CLN6-208, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 945 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-208ENST00000567060 FLYWCH2Q96CP2 140 aaKnown RBP13.34□□□□□ -0.27
CLN6-208ENST00000567060 C5orf30Q96GV9 206 aa13.34□□□□□ -0.27
CLN6-208ENST00000567060 SDHCQ99643 169 aaPredicted RBP13.34□□□□□ -0.27
CLN6-208ENST00000567060 TNFRSF19Q9NS68 423 aa13.34□□□□□ -0.27
CLN6-208ENST00000567060 IGHV3-72A0A0B4J1Y9 119 aa13.33□□□□□ -0.28
CLN6-208ENST00000567060 CENPXA8MT69 81 aa13.33□□□□□ -0.28
CLN6-208ENST00000567060 H7C2Y5 167 aa13.33□□□□□ -0.28
CLN6-208ENST00000567060 J3QRK9 145 aa13.33□□□□□ -0.28
CLN6-208ENST00000567060 IL7P13232 177 aa13.33□□□□□ -0.28
CLN6-208ENST00000567060 RND3P61587 244 aa13.33□□□□□ -0.28
CLN6-208ENST00000567060 BAK1Q16611 211 aa13.33□□□□□ -0.28
CLN6-208ENST00000567060 ZNF57Q68EA5 555 aaPredicted RBP13.33□□□□□ -0.28
CLN6-208ENST00000567060 ZNF818PQ6ZRF7 136 aa13.33□□□□□ -0.28
CLN6-208ENST00000567060 POC5Q8NA72 575 aa13.33□□□□□ -0.28
CLN6-208ENST00000567060 NPBQ8NG41 125 aa13.33□□□□□ -0.28
CLN6-208ENST00000567060 OSR1Q8TAX0 266 aaPredicted RBP13.33□□□□□ -0.28
CLN6-208ENST00000567060 TSNAXQ99598 290 aaKnown RBP13.33□□□□□ -0.28
CLN6-208ENST00000567060 AIFM2Q9BRQ8 373 aa13.33□□□□□ -0.28
CLN6-208ENST00000567060 HRASLSQ9HDD0 168 aa13.33□□□□□ -0.28
CLN6-208ENST00000567060 NOTCH1P46531 2555 aa13.32□□□□□ -0.28
CLN6-208ENST00000567060 CHST1O43916 411 aa13.32□□□□□ -0.28
CLN6-208ENST00000567060 B3GALNT1O75752 331 aa13.32□□□□□ -0.28
CLN6-208ENST00000567060 CD24P25063 80 aa13.32□□□□□ -0.28
CLN6-208ENST00000567060 FOXL1Q12952 345 aa13.32□□□□□ -0.28
CLN6-208ENST00000567060 SCGB2B2Q4G0G5 96 aa13.32□□□□□ -0.28
CLN6-208ENST00000567060 TMEM177Q53S58 311 aa13.32□□□□□ -0.28
CLN6-208ENST00000567060 TREML4Q6UXN2 200 aa13.32□□□□□ -0.28
CLN6-208ENST00000567060 Q8N2B8 174 aa13.32□□□□□ -0.28
CLN6-208ENST00000567060 CCDC71LQ8N9Z2 235 aa13.32□□□□□ -0.28
CLN6-208ENST00000567060 DRAXINQ8NBI3 349 aaPredicted RBP13.32□□□□□ -0.28
CLN6-208ENST00000567060 OR51S1Q8NGJ8 323 aa13.32□□□□□ -0.28
CLN6-208ENST00000567060 OR4F5Q8NH21 305 aa13.32□□□□□ -0.28
CLN6-208ENST00000567060 OR4S2Q8NH73 311 aa13.32□□□□□ -0.28
CLN6-208ENST00000567060 SLC25A21Q9BQT8 299 aaPredicted RBP13.32□□□□□ -0.28
CLN6-208ENST00000567060 PRSS22Q9GZN4 317 aa13.32□□□□□ -0.28
CLN6-208ENST00000567060 C16orf95Q9H693 158 aa13.32□□□□□ -0.28
CLN6-208ENST00000567060 LIN7CQ9NUP9 197 aaKnown RBP13.32□□□□□ -0.28
CLN6-208ENST00000567060 MCUBQ9NWR8 336 aa13.32□□□□□ -0.28
CLN6-208ENST00000567060 KIAA1456Q9P272 454 aa13.32□□□□□ -0.28
CLN6-208ENST00000567060 MMP24Q9Y5R2 645 aa13.32□□□□□ -0.28
CLN6-208ENST00000567060 LINC00473A8K010 186 aa13.31□□□□□ -0.28
CLN6-208ENST00000567060 NBR2O15453 112 aa13.31□□□□□ -0.28
CLN6-208ENST00000567060 NDUFA3O95167 84 aa13.31□□□□□ -0.28
CLN6-208ENST00000567060 CTSDP07339 412 aaPredicted RBP13.31□□□□□ -0.28
CLN6-208ENST00000567060 PGAM2P15259 253 aa13.31□□□□□ -0.28
CLN6-208ENST00000567060 MMDQ15546 238 aa13.31□□□□□ -0.28
CLN6-208ENST00000567060 ABCA11PQ4W5N1 156 aa13.31□□□□□ -0.28
CLN6-208ENST00000567060 GLDNQ6ZMI3 551 aaPredicted RBP13.31□□□□□ -0.28
CLN6-208ENST00000567060 IDO2Q6ZQW0 420 aa13.31□□□□□ -0.28
CLN6-208ENST00000567060 TMEM219Q86XT9 240 aa13.31□□□□□ -0.28
CLN6-208ENST00000567060 TCTEX1D2Q8WW35 142 aa13.31□□□□□ -0.28
CLN6-208ENST00000567060 PGLYRP1O75594 196 aaPredicted RBP13.3□□□□□ -0.28
CLN6-208ENST00000567060 C5orf56Q8N8D9 126 aa13.3□□□□□ -0.28
CLN6-208ENST00000567060 SLC2A9Q9NRM0 540 aa13.3□□□□□ -0.28
CLN6-208ENST00000567060 PLSCR3Q9NRY6 295 aa13.3□□□□□ -0.28
CLN6-208ENST00000567060 C14orf166Q9Y224 244 aaKnown RBP13.3□□□□□ -0.28
CLN6-208ENST00000567060 NCBP2LA6PVI3 153 aaKnown RBP13.29□□□□□ -0.28
CLN6-208ENST00000567060 IGKV1-16P04430 117 aa13.29□□□□□ -0.28
CLN6-208ENST00000567060 F2RP25116 425 aa13.29□□□□□ -0.28
CLN6-208ENST00000567060 RAG2P55895 527 aa13.29□□□□□ -0.28
CLN6-208ENST00000567060 RPS16P62249 146 aaKnown RBP13.29□□□□□ -0.28
CLN6-208ENST00000567060 HNF4GQ14541 408 aa13.29□□□□□ -0.28
CLN6-208ENST00000567060 FAAP20Q6NZ36 180 aa13.29□□□□□ -0.28
CLN6-208ENST00000567060 CADM3Q8N126 398 aa13.29□□□□□ -0.28
CLN6-208ENST00000567060 FAM71E2Q8N5Q1 922 aa13.29□□□□□ -0.28
CLN6-208ENST00000567060 Q8N9W7 124 aa13.29□□□□□ -0.28
CLN6-208ENST00000567060 OR13C8Q8NGS7 320 aa13.29□□□□□ -0.28
CLN6-208ENST00000567060 OR2T6Q8NHC8 308 aa13.29□□□□□ -0.28
CLN6-208ENST00000567060 HARBI1Q96MB7 349 aa13.29□□□□□ -0.28
CLN6-208ENST00000567060 RASL11BQ9BPW5 248 aa13.29□□□□□ -0.28
CLN6-208ENST00000567060 BEX1Q9HBH7 125 aa13.29□□□□□ -0.28
CLN6-208ENST00000567060 COPZ2Q9P299 210 aa13.29□□□□□ -0.28
CLN6-208ENST00000567060 GPR132Q9UNW8 380 aa13.29□□□□□ -0.28
CLN6-208ENST00000567060 PIGBOS1A0A0B4J2F0 54 aa13.28□□□□□ -0.28
CLN6-208ENST00000567060 RRHO14718 337 aa13.28□□□□□ -0.28
CLN6-208ENST00000567060 SHOXO15266 292 aa13.28□□□□□ -0.28
CLN6-208ENST00000567060 CREBL2O60519 120 aaPredicted RBP13.28□□□□□ -0.28
CLN6-208ENST00000567060 FCGR3BO75015 233 aa13.28□□□□□ -0.28
CLN6-208ENST00000567060 HPRT1P00492 218 aa13.28□□□□□ -0.28
CLN6-208ENST00000567060 HRASP01112 189 aa13.28□□□□□ -0.28
CLN6-208ENST00000567060 RPA2P15927 270 aa13.28□□□□□ -0.28
CLN6-208ENST00000567060 PIGPP57054 158 aa13.28□□□□□ -0.28
CLN6-208ENST00000567060 RPL30P62888 115 aaKnown RBP13.28□□□□□ -0.28
CLN6-208ENST00000567060 RBMS2Q15434 407 aaKnown RBP13.28□□□□□ -0.28
CLN6-208ENST00000567060 C5orf64Q2M2E5 130 aa13.28□□□□□ -0.28
CLN6-208ENST00000567060 VMA21Q3ZAQ7 101 aa13.28□□□□□ -0.28
CLN6-208ENST00000567060 Q6ZSV7 163 aa13.28□□□□□ -0.28
CLN6-208ENST00000567060 SPAG16Q8N0X2 631 aa13.28□□□□□ -0.28
CLN6-208ENST00000567060 VSTM2AQ8TAG5 236 aa13.28□□□□□ -0.28
CLN6-208ENST00000567060 MARCH1Q8TCQ1 289 aa13.28□□□□□ -0.28
CLN6-208ENST00000567060 PLEKHA2Q9HB19 425 aa13.28□□□□□ -0.28
CLN6-208ENST00000567060 COMMD9Q9P000 198 aa13.28□□□□□ -0.28
CLN6-208ENST00000567060 ZNF580Q9UK33 172 aa13.28□□□□□ -0.28
CLN6-208ENST00000567060 MPPED1O15442 326 aa13.27□□□□□ -0.29
CLN6-208ENST00000567060 TNFSF12O43508 249 aa13.27□□□□□ -0.29
CLN6-208ENST00000567060 UPK1BO75841 260 aa13.27□□□□□ -0.29
CLN6-208ENST00000567060 CRYZL1O95825 349 aa13.27□□□□□ -0.29
CLN6-208ENST00000567060 HLA-DRB1P01911 266 aa13.27□□□□□ -0.29
CLN6-208ENST00000567060 AMY1AP04745 511 aa13.27□□□□□ -0.29
CLN6-208ENST00000567060 RLN1P04808 185 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms