RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 AKR1C2P52895 323 aa15.19■□□□□ 0.02
COMMD4-213ENST00000565834 LGALS4P56470 323 aa15.19■□□□□ 0.02
COMMD4-213ENST00000565834 RTL8BQ17RB0 113 aa15.19■□□□□ 0.02
COMMD4-213ENST00000565834 RNASE11Q8TAA1 199 aaKnown RBP15.19■□□□□ 0.02
COMMD4-213ENST00000565834 OR10C1Q96KK4 312 aa15.19■□□□□ 0.02
COMMD4-213ENST00000565834 SLC35D1Q9NTN3 355 aa15.19■□□□□ 0.02
COMMD4-213ENST00000565834 ATG12O94817 140 aa15.19■□□□□ 0.02
COMMD4-213ENST00000565834 HPRT1P00492 218 aa15.19■□□□□ 0.02
COMMD4-213ENST00000565834 IGHV4-31P0DP07 118 aa15.19■□□□□ 0.02
COMMD4-213ENST00000565834 GZMKP49863 264 aa15.19■□□□□ 0.02
COMMD4-213ENST00000565834 TAGLNQ01995 201 aaKnown RBP15.19■□□□□ 0.02
COMMD4-213ENST00000565834 SRSF4Q08170 494 aaKnown RBP15.19■□□□□ 0.02
COMMD4-213ENST00000565834 TPTE2P1Q5T6R2 138 aa15.19■□□□□ 0.02
COMMD4-213ENST00000565834 WDR89Q96FK6 387 aaPredicted RBP15.19■□□□□ 0.02
COMMD4-213ENST00000565834 C7orf69Q9H7B7 122 aa15.19■□□□□ 0.02
COMMD4-213ENST00000565834 PLEKHA2Q9HB19 425 aa15.19■□□□□ 0.02
COMMD4-213ENST00000565834 H0YJW9 148 aa15.18■□□□□ 0.02
COMMD4-213ENST00000565834 CRYZL1O95825 349 aa15.18■□□□□ 0.02
COMMD4-213ENST00000565834 TGFAP01135 160 aa15.18■□□□□ 0.02
COMMD4-213ENST00000565834 RRASP10301 218 aa15.18■□□□□ 0.02
COMMD4-213ENST00000565834 CYCSP99999 105 aaKnown RBP15.18■□□□□ 0.02
COMMD4-213ENST00000565834 IAH1Q2TAA2 248 aaPredicted RBP15.18■□□□□ 0.02
COMMD4-213ENST00000565834 NMSQ5H8A3 153 aa15.18■□□□□ 0.02
COMMD4-213ENST00000565834 MINOS1Q5TGZ0 78 aa15.18■□□□□ 0.02
COMMD4-213ENST00000565834 OR5AN1Q8NGI8 311 aa15.18■□□□□ 0.02
COMMD4-213ENST00000565834 OR2T35Q8NGX2 323 aa15.18■□□□□ 0.02
COMMD4-213ENST00000565834 RRNAD1Q96FB5 475 aaKnown RBP15.18■□□□□ 0.02
COMMD4-213ENST00000565834 C2orf50Q96LR7 162 aa15.18■□□□□ 0.02
COMMD4-213ENST00000565834 MINOS1-NBL1R4GNA1 71 aa15.18■□□□□ 0.02
COMMD4-213ENST00000565834 EPHA1P21709 976 aa15.17■□□□□ 0.02
COMMD4-213ENST00000565834 LDLRAD2Q5SZI1 272 aa15.17■□□□□ 0.02
COMMD4-213ENST00000565834 DHRS7BQ6IAN0 325 aaPredicted RBP15.17■□□□□ 0.02
COMMD4-213ENST00000565834 LHFPL4Q7Z7J7 247 aa15.17■□□□□ 0.02
COMMD4-213ENST00000565834 LSM10Q969L4 123 aaKnown RBP15.17■□□□□ 0.02
COMMD4-213ENST00000565834 SPIN2AQ99865 258 aa15.17■□□□□ 0.02
COMMD4-213ENST00000565834 SPIN2BQ9BPZ2 258 aa15.17■□□□□ 0.02
COMMD4-213ENST00000565834 NMES1Q9C002 83 aa15.17■□□□□ 0.02
COMMD4-213ENST00000565834 COMMD9Q9P000 198 aa15.17■□□□□ 0.02
COMMD4-213ENST00000565834 TBL2Q9Y4P3 447 aaKnown RBP15.17■□□□□ 0.02
COMMD4-213ENST00000565834 IGHV1-3A0A0C4DH29 117 aa15.16■□□□□ 0.02
COMMD4-213ENST00000565834 CENPVL3A0A0U1RRI6 287 aa15.16■□□□□ 0.02
COMMD4-213ENST00000565834 SMLR1H3BR10 107 aa15.16■□□□□ 0.02
COMMD4-213ENST00000565834 H7C2Y5 167 aa15.16■□□□□ 0.02
COMMD4-213ENST00000565834 KRASP01116 189 aa15.16■□□□□ 0.02
COMMD4-213ENST00000565834 IGKV1-5P01602 117 aa15.16■□□□□ 0.02
COMMD4-213ENST00000565834 G6PCP35575 357 aa15.16■□□□□ 0.02
COMMD4-213ENST00000565834 EIF2B2P49770 351 aaKnown RBP15.16■□□□□ 0.02
COMMD4-213ENST00000565834 R3HDM4Q96D70 268 aa15.16■□□□□ 0.02
COMMD4-213ENST00000565834 RANBP3Q9H6Z4 567 aaPredicted RBP15.16■□□□□ 0.02
COMMD4-213ENST00000565834 GSKIPQ9P0R6 139 aa15.16■□□□□ 0.02
COMMD4-213ENST00000565834 J3QLI3 93 aa15.16■□□□□ 0.02
COMMD4-213ENST00000565834 MC5RP33032 325 aa15.16■□□□□ 0.02
COMMD4-213ENST00000565834 RAB13P51153 203 aa15.16■□□□□ 0.02
COMMD4-213ENST00000565834 ZFP69Q49AA0 526 aa15.16■□□□□ 0.02
COMMD4-213ENST00000565834 THOC7Q6I9Y2 204 aaKnown RBP15.16■□□□□ 0.02
COMMD4-213ENST00000565834 MOB3BQ86TA1 216 aa15.16■□□□□ 0.02
COMMD4-213ENST00000565834 PDPNQ86YL7 162 aa15.16■□□□□ 0.02
COMMD4-213ENST00000565834 WASHC3Q9Y3C0 194 aa15.16■□□□□ 0.02
COMMD4-213ENST00000565834 HILPDAQ9Y5L2 63 aa15.16■□□□□ 0.02
COMMD4-213ENST00000565834 ZANQ9Y493 2812 aa15.15■□□□□ 0.02
COMMD4-213ENST00000565834 ABCA1O95477 2261 aa15.15■□□□□ 0.02
COMMD4-213ENST00000565834 TRAV40A0A0B4J280 105 aa15.15■□□□□ 0.02
COMMD4-213ENST00000565834 A0A0G2JRQ6 117 aa15.15■□□□□ 0.02
COMMD4-213ENST00000565834 A0A1W2PPI3 338 aa15.15■□□□□ 0.02
COMMD4-213ENST00000565834 MARCH11A6NNE9 402 aa15.15■□□□□ 0.02
COMMD4-213ENST00000565834 NPFFO15130 113 aa15.15■□□□□ 0.02
COMMD4-213ENST00000565834 IGKV1-16P04430 117 aa15.15■□□□□ 0.02
COMMD4-213ENST00000565834 NQO2P16083 231 aa15.15■□□□□ 0.02
COMMD4-213ENST00000565834 ERVK-16P61578 105 aa15.15■□□□□ 0.02
COMMD4-213ENST00000565834 MIDNQ504T8 468 aa15.15■□□□□ 0.02
COMMD4-213ENST00000565834 FAM219AQ8IW50 185 aa15.15■□□□□ 0.02
COMMD4-213ENST00000565834 OR8H3Q8N146 312 aa15.15■□□□□ 0.02
COMMD4-213ENST00000565834 GPR146Q96CH1 333 aa15.15■□□□□ 0.02
COMMD4-213ENST00000565834 MMP24Q9Y5R2 645 aa15.15■□□□□ 0.02
COMMD4-213ENST00000565834 IGHV1-69DA0A0B4J2H0 117 aa15.14■□□□□ 0.01
COMMD4-213ENST00000565834 OOSP1A8MZH6 123 aa15.14■□□□□ 0.01
COMMD4-213ENST00000565834 IGHV1-69P01742 117 aa15.14■□□□□ 0.01
COMMD4-213ENST00000565834 C1QBP02746 253 aa15.14■□□□□ 0.01
COMMD4-213ENST00000565834 GPR157Q5UAW9 335 aa15.14■□□□□ 0.01
COMMD4-213ENST00000565834 CYB5R2Q6BCY4 276 aa15.14■□□□□ 0.01
COMMD4-213ENST00000565834 DMBX1Q8NFW5 382 aa15.14■□□□□ 0.01
COMMD4-213ENST00000565834 PPP1R1CQ8WVI7 109 aa15.14■□□□□ 0.01
COMMD4-213ENST00000565834 FLNAP21333 2647 aaKnown RBP15.13■□□□□ 0.01
COMMD4-213ENST00000565834 IGHV3-72A0A0B4J1Y9 119 aa15.13■□□□□ 0.01
COMMD4-213ENST00000565834 A0A1B0GU03 582 aa15.13■□□□□ 0.01
COMMD4-213ENST00000565834 HRASP01112 189 aa15.13■□□□□ 0.01
COMMD4-213ENST00000565834 SLC25A6P12236 298 aa15.13■□□□□ 0.01
COMMD4-213ENST00000565834 SAA4P35542 130 aa15.13■□□□□ 0.01
COMMD4-213ENST00000565834 SSX2Q16385 188 aa15.13■□□□□ 0.01
COMMD4-213ENST00000565834 IZUMO4Q1ZYL8 232 aa15.13■□□□□ 0.01
COMMD4-213ENST00000565834 LRRC37A5PQ49AS3 106 aa15.13■□□□□ 0.01
COMMD4-213ENST00000565834 CCDC144NLQ6NUI1 221 aa15.13■□□□□ 0.01
COMMD4-213ENST00000565834 H2BFWTQ7Z2G1 175 aa15.13■□□□□ 0.01
COMMD4-213ENST00000565834 OSR1Q8TAX0 266 aaPredicted RBP15.13■□□□□ 0.01
COMMD4-213ENST00000565834 FLYWCH2Q96CP2 140 aaKnown RBP15.13■□□□□ 0.01
COMMD4-213ENST00000565834 NOTCH2Q04721 2471 aa15.13■□□□□ 0.01
COMMD4-213ENST00000565834 IGHV3OR16-10A0A075B7F0 116 aa15.12■□□□□ 0.01
COMMD4-213ENST00000565834 SHOXO15266 292 aa15.12■□□□□ 0.01
COMMD4-213ENST00000565834 P0C879 139 aa15.12■□□□□ 0.01
COMMD4-213ENST00000565834 SMCO1Q147U7 214 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms