RNA–Protein interactions for RNA: ENST00000564236.1

CCNF-203, Transcript of cyclin F, humanhuman

TSL 3

Gene CCNF, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-203ENST00000564236 Q8N1Y9 231 aa12.81□□□□□ -0.36
CCNF-203ENST00000564236 TEX45Q8NA69 505 aa12.81□□□□□ -0.36
CCNF-203ENST00000564236 ADTRPQ96IZ2 230 aa12.81□□□□□ -0.36
CCNF-203ENST00000564236 RCHY1Q96PM5 261 aa12.81□□□□□ -0.36
CCNF-203ENST00000564236 SIGLEC8Q9NYZ4 499 aa12.81□□□□□ -0.36
CCNF-203ENST00000564236 C13orf42A0A1B0GVH6 325 aa12.8□□□□□ -0.36
CCNF-203ENST00000564236 METTL21EPA6NDL7 271 aa12.8□□□□□ -0.36
CCNF-203ENST00000564236 TRIM64CA6NLI5 447 aa12.8□□□□□ -0.36
CCNF-203ENST00000564236 CNIH1O95406 144 aa12.8□□□□□ -0.36
CCNF-203ENST00000564236 RAB3BP20337 219 aa12.8□□□□□ -0.36
CCNF-203ENST00000564236 AADACP22760 399 aa12.8□□□□□ -0.36
CCNF-203ENST00000564236 DTYMKP23919 212 aa12.8□□□□□ -0.36
CCNF-203ENST00000564236 DUTP33316 252 aaKnown RBP12.8□□□□□ -0.36
CCNF-203ENST00000564236 UBE2KP61086 200 aa12.8□□□□□ -0.36
CCNF-203ENST00000564236 CBX3Q13185 183 aa12.8□□□□□ -0.36
CCNF-203ENST00000564236 RTL8BQ17RB0 113 aa12.8□□□□□ -0.36
CCNF-203ENST00000564236 ZNF343Q6P1L6 599 aa12.8□□□□□ -0.36
CCNF-203ENST00000564236 IL34Q6ZMJ4 242 aa12.8□□□□□ -0.36
CCNF-203ENST00000564236 NR2C2APQ86WQ0 139 aa12.8□□□□□ -0.36
CCNF-203ENST00000564236 MUC7Q8TAX7 377 aa12.8□□□□□ -0.36
CCNF-203ENST00000564236 USMG5Q96IX5 58 aa12.8□□□□□ -0.36
CCNF-203ENST00000564236 TM2D3Q9BRN9 247 aa12.8□□□□□ -0.36
CCNF-203ENST00000564236 DYNC2H1Q8NCM8 4307 aaKnown RBP12.79□□□□□ -0.36
CCNF-203ENST00000564236 SHOXO15266 292 aa12.79□□□□□ -0.36
CCNF-203ENST00000564236 MYL9P24844 172 aa12.79□□□□□ -0.36
CCNF-203ENST00000564236 DYRK1AQ13627 763 aa12.79□□□□□ -0.36
CCNF-203ENST00000564236 BVESQ8NE79 360 aa12.79□□□□□ -0.36
CCNF-203ENST00000564236 OR5T1Q8NG75 326 aa12.79□□□□□ -0.36
CCNF-203ENST00000564236 OR9G4Q8NGQ1 327 aa12.79□□□□□ -0.36
CCNF-203ENST00000564236 OSR1Q8TAX0 266 aaPredicted RBP12.79□□□□□ -0.36
CCNF-203ENST00000564236 C19orf73Q9NVV2 129 aa12.79□□□□□ -0.36
CCNF-203ENST00000564236 ZNF230Q9UIE0 474 aaPredicted RBP12.79□□□□□ -0.36
CCNF-203ENST00000564236 FGF9P31371 208 aaPredicted RBP12.78□□□□□ -0.36
CCNF-203ENST00000564236 GABARAPL2P60520 117 aa12.78□□□□□ -0.36
CCNF-203ENST00000564236 PRSS8Q16651 343 aa12.78□□□□□ -0.36
CCNF-203ENST00000564236 IZUMO2Q6UXV1 221 aa12.78□□□□□ -0.36
CCNF-203ENST00000564236 ADAD2Q8NCV1 583 aaKnown RBP12.78□□□□□ -0.36
CCNF-203ENST00000564236 GINS4Q9BRT9 223 aa12.78□□□□□ -0.36
CCNF-203ENST00000564236 THAP7Q9BT49 309 aaPredicted RBP12.78□□□□□ -0.36
CCNF-203ENST00000564236 ZNF355PQ9NSJ1 428 aa12.78□□□□□ -0.36
CCNF-203ENST00000564236 IGKV1D-8A0A087WSZ0 117 aa12.77□□□□□ -0.37
CCNF-203ENST00000564236 LINC00473A8K010 186 aa12.77□□□□□ -0.37
CCNF-203ENST00000564236 IGHV4-30-4P0DP06 118 aa12.77□□□□□ -0.37
CCNF-203ENST00000564236 VMA21Q3ZAQ7 101 aa12.77□□□□□ -0.37
CCNF-203ENST00000564236 CASC10Q5T4H9 136 aa12.77□□□□□ -0.37
CCNF-203ENST00000564236 UBE2UQ5VVX9 321 aa12.77□□□□□ -0.37
CCNF-203ENST00000564236 OVCH2Q7RTZ1 564 aa12.77□□□□□ -0.37
CCNF-203ENST00000564236 ANKRD13BQ86YJ7 626 aa12.77□□□□□ -0.37
CCNF-203ENST00000564236 MAFIPQ8WZ33 124 aa12.77□□□□□ -0.37
CCNF-203ENST00000564236 CNBD2Q96M20 576 aa12.77□□□□□ -0.37
CCNF-203ENST00000564236 DCSTAMPQ9H295 470 aa12.77□□□□□ -0.37
CCNF-203ENST00000564236 ZMAT4Q9H898 229 aa12.77□□□□□ -0.37
CCNF-203ENST00000564236 PEF1Q9UBV8 284 aaKnown RBP12.77□□□□□ -0.37
CCNF-203ENST00000564236 RAB26Q9ULW5 256 aa12.77□□□□□ -0.37
CCNF-203ENST00000564236 TRBV9A0A0B4J1U6 114 aa12.76□□□□□ -0.37
CCNF-203ENST00000564236 A0A0B4J203 849 aa12.76□□□□□ -0.37
CCNF-203ENST00000564236 RBMXL2O75526 392 aaKnown RBP12.76□□□□□ -0.37
CCNF-203ENST00000564236 CTXN2P0C2S0 81 aa12.76□□□□□ -0.37
CCNF-203ENST00000564236 OR9G9P0C7N8 305 aa12.76□□□□□ -0.37
CCNF-203ENST00000564236 TALDO1P37837 337 aa12.76□□□□□ -0.37
CCNF-203ENST00000564236 HACD4Q5VWC8 232 aa12.76□□□□□ -0.37
CCNF-203ENST00000564236 ZNF645Q8N7E2 425 aa12.76□□□□□ -0.37
CCNF-203ENST00000564236 SRSF12Q8WXF0 261 aaKnown RBP12.76□□□□□ -0.37
CCNF-203ENST00000564236 CITED4Q96RK1 184 aa12.76□□□□□ -0.37
CCNF-203ENST00000564236 MSGN1A6NI15 193 aa12.75□□□□□ -0.37
CCNF-203ENST00000564236 NOTOA8MTQ0 251 aa12.75□□□□□ -0.37
CCNF-203ENST00000564236 H0Y980 276 aa12.75□□□□□ -0.37
CCNF-203ENST00000564236 CREBL2O60519 120 aaPredicted RBP12.75□□□□□ -0.37
CCNF-203ENST00000564236 SCGNO76038 276 aa12.75□□□□□ -0.37
CCNF-203ENST00000564236 SLC22A5O76082 557 aa12.75□□□□□ -0.37
CCNF-203ENST00000564236 OR2A4O95047 310 aa12.75□□□□□ -0.37
CCNF-203ENST00000564236 CRYZL1O95825 349 aa12.75□□□□□ -0.37
CCNF-203ENST00000564236 IGLV2-14P01704 120 aa12.75□□□□□ -0.37
CCNF-203ENST00000564236 HLA-DQB1P01920 261 aa12.75□□□□□ -0.37
CCNF-203ENST00000564236 MECP2P51608 486 aaKnown RBP12.75□□□□□ -0.37
CCNF-203ENST00000564236 ARFRP1Q13795 201 aa12.75□□□□□ -0.37
CCNF-203ENST00000564236 C22orf42Q6IC83 251 aa12.75□□□□□ -0.37
CCNF-203ENST00000564236 HAPLN4Q86UW8 402 aa12.75□□□□□ -0.37
CCNF-203ENST00000564236 ELF5Q9UKW6 265 aaPredicted RBP12.75□□□□□ -0.37
CCNF-203ENST00000564236 OR2W1Q9Y3N9 320 aa12.75□□□□□ -0.37
CCNF-203ENST00000564236 RBM7Q9Y580 266 aaKnown RBP12.75□□□□□ -0.37
CCNF-203ENST00000564236 A0A075B6Q4 140 aa12.74□□□□□ -0.37
CCNF-203ENST00000564236 ANKRD34BA5PLL1 514 aa12.74□□□□□ -0.37
CCNF-203ENST00000564236 FAM223BA6NKX1 122 aa12.74□□□□□ -0.37
CCNF-203ENST00000564236 TRBV12-3P01733 135 aa12.74□□□□□ -0.37
CCNF-203ENST00000564236 CSN3P07498 182 aa12.74□□□□□ -0.37
CCNF-203ENST00000564236 SYNJ2BPP57105 145 aa12.74□□□□□ -0.37
CCNF-203ENST00000564236 EIF4EBP1Q13541 118 aaPredicted RBP12.74□□□□□ -0.37
CCNF-203ENST00000564236 CDK10Q15131 360 aa12.74□□□□□ -0.37
CCNF-203ENST00000564236 CDNFQ49AH0 187 aa12.74□□□□□ -0.37
CCNF-203ENST00000564236 TPRA1Q86W33 373 aa12.74□□□□□ -0.37
CCNF-203ENST00000564236 FAM223AQ8IWN6 122 aa12.74□□□□□ -0.37
CCNF-203ENST00000564236 ATG5Q9H1Y0 275 aa12.74□□□□□ -0.37
CCNF-203ENST00000564236 ZNF430Q9H8G1 570 aaPredicted RBP12.74□□□□□ -0.37
CCNF-203ENST00000564236 COA4Q9NYJ1 87 aa12.74□□□□□ -0.37
CCNF-203ENST00000564236 SAA1P0DJI8 122 aaPredicted RBP12.73□□□□□ -0.37
CCNF-203ENST00000564236 TNXAQ16473 311 aa12.73□□□□□ -0.37
CCNF-203ENST00000564236 TATDN3Q17R31 274 aa12.73□□□□□ -0.37
CCNF-203ENST00000564236 FAM209BQ5JX69 171 aa12.73□□□□□ -0.37
CCNF-203ENST00000564236 IDO2Q6ZQW0 420 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms