RNA–Protein interactions for RNA: ENST00000556534.1

SCFD1-221, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-221ENST00000556534 PRDX4Q13162 271 aa1.81□□□□□ -2.12
SCFD1-221ENST00000556534 FAM78BQ5VT40 261 aa1.81□□□□□ -2.12
SCFD1-221ENST00000556534 NOXRED1Q6NXP6 359 aa1.81□□□□□ -2.12
SCFD1-221ENST00000556534 LRRC34Q8IZ02 419 aa1.81□□□□□ -2.12
SCFD1-221ENST00000556534 LY6G5BQ8NDX9 201 aa1.81□□□□□ -2.12
SCFD1-221ENST00000556534 OR10P1Q8NGE3 313 aa1.81□□□□□ -2.12
SCFD1-221ENST00000556534 MS4A6EQ96DS6 147 aa1.81□□□□□ -2.12
SCFD1-221ENST00000556534 CPNE2Q96FN4 548 aaPredicted RBP1.81□□□□□ -2.12
SCFD1-221ENST00000556534 SLC35G5Q96KT7 338 aa1.81□□□□□ -2.12
SCFD1-221ENST00000556534 PRAP1Q96NZ9 151 aa1.81□□□□□ -2.12
SCFD1-221ENST00000556534 OR51V1Q9H2C8 321 aa1.81□□□□□ -2.12
SCFD1-221ENST00000556534 OR51I2Q9H344 312 aa1.81□□□□□ -2.12
SCFD1-221ENST00000556534 ANAPC10Q9UM13 185 aa1.81□□□□□ -2.12
SCFD1-221ENST00000556534 HHLA2Q9UM44 414 aa1.81□□□□□ -2.12
SCFD1-221ENST00000556534 COQ4Q9Y3A0 265 aa1.81□□□□□ -2.12
SCFD1-221ENST00000556534 SIPA1L1O43166 1804 aa1.81□□□□□ -2.12
SCFD1-221ENST00000556534 PTPRJQ12913 1337 aa1.81□□□□□ -2.12
SCFD1-221ENST00000556534 DOCK6Q96HP0 2047 aa1.8□□□□□ -2.12
SCFD1-221ENST00000556534 LOC102725191A0A1B0GVB3 256 aa1.8□□□□□ -2.12
SCFD1-221ENST00000556534 A0A1W2PNM2 257 aa1.8□□□□□ -2.12
SCFD1-221ENST00000556534 OR6C6A6NF89 314 aa1.8□□□□□ -2.12
SCFD1-221ENST00000556534 TMEM114B3SHH9 223 aa1.8□□□□□ -2.12
SCFD1-221ENST00000556534 J3QRE1 110 aa1.8□□□□□ -2.12
SCFD1-221ENST00000556534 KPNA3O00505 521 aaPredicted RBP1.8□□□□□ -2.12
SCFD1-221ENST00000556534 TRAPPC3O43617 180 aa1.8□□□□□ -2.12
SCFD1-221ENST00000556534 LY6HO94772 140 aa1.8□□□□□ -2.12
SCFD1-221ENST00000556534 APOMO95445 188 aa1.8□□□□□ -2.12
SCFD1-221ENST00000556534 TNNC2P02585 160 aa1.8□□□□□ -2.12
SCFD1-221ENST00000556534 CCL3P10147 92 aa1.8□□□□□ -2.12
SCFD1-221ENST00000556534 MARCKSL1P49006 195 aa1.8□□□□□ -2.12
SCFD1-221ENST00000556534 AKR1C2P52895 323 aa1.8□□□□□ -2.12
SCFD1-221ENST00000556534 ERVS71-1P61550 626 aa1.8□□□□□ -2.12
SCFD1-221ENST00000556534 IFITM2Q01629 132 aa1.8□□□□□ -2.12
SCFD1-221ENST00000556534 TRAPPC5Q8IUR0 188 aa1.8□□□□□ -2.12
SCFD1-221ENST00000556534 DEFB125Q8N687 156 aa1.8□□□□□ -2.12
SCFD1-221ENST00000556534 OR11H1Q8NG94 326 aa1.8□□□□□ -2.12
SCFD1-221ENST00000556534 OR10D4PQ8NGN7 298 aa1.8□□□□□ -2.12
SCFD1-221ENST00000556534 OR2T4Q8NH00 348 aa1.8□□□□□ -2.12
SCFD1-221ENST00000556534 OR2T27Q8NH04 317 aa1.8□□□□□ -2.12
SCFD1-221ENST00000556534 DIRAS2Q96HU8 199 aa1.8□□□□□ -2.12
SCFD1-221ENST00000556534 OR8B2Q96RD0 313 aa1.8□□□□□ -2.12
SCFD1-221ENST00000556534 VPREB3Q9UKI3 123 aa1.8□□□□□ -2.12
SCFD1-221ENST00000556534 CLASP1Q7Z460 1538 aa1.8□□□□□ -2.12
SCFD1-221ENST00000556534 GOLGA6L19H0YKK7 550 aa1.79□□□□□ -2.12
SCFD1-221ENST00000556534 SYNGR2O43760 224 aa1.79□□□□□ -2.12
SCFD1-221ENST00000556534 RPP14O95059 124 aaKnown RBP1.79□□□□□ -2.12
SCFD1-221ENST00000556534 SOD1P00441 154 aa1.79□□□□□ -2.12
SCFD1-221ENST00000556534 HLA-DQB2P05538 268 aa1.79□□□□□ -2.12
SCFD1-221ENST00000556534 NPPCP23582 126 aa1.79□□□□□ -2.12
SCFD1-221ENST00000556534 ATP6V0CP27449 155 aa1.79□□□□□ -2.12
SCFD1-221ENST00000556534 TAS2R45P59539 299 aa1.79□□□□□ -2.12
SCFD1-221ENST00000556534 AP3S2P59780 193 aa1.79□□□□□ -2.12
SCFD1-221ENST00000556534 HTR4Q13639 388 aa1.79□□□□□ -2.12
SCFD1-221ENST00000556534 UAP1Q16222 522 aaPredicted RBP1.79□□□□□ -2.12
SCFD1-221ENST00000556534 HIST3H3Q16695 136 aa1.79□□□□□ -2.12
SCFD1-221ENST00000556534 PLPPR5Q32ZL2 321 aa1.79□□□□□ -2.12
SCFD1-221ENST00000556534 LGALS9BQ3B8N2 356 aa1.79□□□□□ -2.12
SCFD1-221ENST00000556534 PYDC2Q56P42 97 aa1.79□□□□□ -2.12
SCFD1-221ENST00000556534 TMEM31Q5JXX7 168 aa1.79□□□□□ -2.12
SCFD1-221ENST00000556534 LGALS9CQ6DKI2 356 aa1.79□□□□□ -2.12
SCFD1-221ENST00000556534 RASL11AQ6T310 242 aa1.79□□□□□ -2.12
SCFD1-221ENST00000556534 GPHB5Q86YW7 130 aa1.79□□□□□ -2.12
SCFD1-221ENST00000556534 MSRB3Q8IXL7 192 aa1.79□□□□□ -2.12
SCFD1-221ENST00000556534 C1orf158Q8N1D5 194 aa1.79□□□□□ -2.12
SCFD1-221ENST00000556534 UMODL1-AS1Q8N2C9 162 aa1.79□□□□□ -2.12
SCFD1-221ENST00000556534 PACRGLQ8N7B6 248 aa1.79□□□□□ -2.12
SCFD1-221ENST00000556534 OR2D3Q8NGH3 330 aa1.79□□□□□ -2.12
SCFD1-221ENST00000556534 OR4K13Q8NH42 304 aa1.79□□□□□ -2.12
SCFD1-221ENST00000556534 SLC35B4Q969S0 331 aa1.79□□□□□ -2.12
SCFD1-221ENST00000556534 CHMP6Q96FZ7 201 aa1.79□□□□□ -2.12
SCFD1-221ENST00000556534 CCL13Q99616 98 aa1.79□□□□□ -2.12
SCFD1-221ENST00000556534 NKX6-2Q9C056 277 aaPredicted RBP1.79□□□□□ -2.12
SCFD1-221ENST00000556534 SMDT1Q9H4I9 107 aa1.79□□□□□ -2.12
SCFD1-221ENST00000556534 SLC2A9Q9NRM0 540 aa1.79□□□□□ -2.12
SCFD1-221ENST00000556534 SNX12Q9UMY4 172 aa1.79□□□□□ -2.12
SCFD1-221ENST00000556534 SLC22A13Q9Y226 551 aa1.79□□□□□ -2.12
SCFD1-221ENST00000556534 PXMP4Q9Y6I8 212 aa1.79□□□□□ -2.12
SCFD1-221ENST00000556534 REREQ9P2R6 1566 aa1.79□□□□□ -2.12
SCFD1-221ENST00000556534 WDR90Q96KV7 1748 aa1.79□□□□□ -2.12
SCFD1-221ENST00000556534 RALGAPA2Q2PPJ7 1873 aa1.79□□□□□ -2.12
SCFD1-221ENST00000556534 ARHGAP32A7KAX9 2087 aa1.78□□□□□ -2.12
SCFD1-221ENST00000556534 DOCK5Q9H7D0 1870 aa1.78□□□□□ -2.12
SCFD1-221ENST00000556534 SLX4Q8IY92 1834 aa1.78□□□□□ -2.12
SCFD1-221ENST00000556534 GRIN2BQ13224 1484 aa1.78□□□□□ -2.12
SCFD1-221ENST00000556534 INMT-MINDY4F8WBC2 141 aa1.78□□□□□ -2.12
SCFD1-221ENST00000556534 SLC17A3O00476 420 aa1.78□□□□□ -2.12
SCFD1-221ENST00000556534 CHP2O43745 196 aa1.78□□□□□ -2.12
SCFD1-221ENST00000556534 ATP5HO75947 161 aa1.78□□□□□ -2.12
SCFD1-221ENST00000556534 UCHL3P15374 230 aa1.78□□□□□ -2.12
SCFD1-221ENST00000556534 SLC25A16P16260 332 aa1.78□□□□□ -2.12
SCFD1-221ENST00000556534 ALOX5APP20292 161 aa1.78□□□□□ -2.12
SCFD1-221ENST00000556534 CRHBPP24387 322 aa1.78□□□□□ -2.12
SCFD1-221ENST00000556534 SERPINB10P48595 397 aa1.78□□□□□ -2.12
SCFD1-221ENST00000556534 SULT1A1P50225 295 aa1.78□□□□□ -2.12
SCFD1-221ENST00000556534 GZMMP51124 257 aa1.78□□□□□ -2.12
SCFD1-221ENST00000556534 RAP1GDS1P52306 607 aa1.78□□□□□ -2.12
SCFD1-221ENST00000556534 CCL7P80098 99 aa1.78□□□□□ -2.12
SCFD1-221ENST00000556534 TNFAIP6P98066 277 aaPredicted RBP1.78□□□□□ -2.12
SCFD1-221ENST00000556534 STX5Q13190 355 aa1.78□□□□□ -2.12
SCFD1-221ENST00000556534 CST6Q15828 149 aa1.78□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 165.3 ms