RNA–Protein interactions for RNA: ENST00000556413.1

SCFD1-219, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 512 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-219ENST00000556413 SIRPB1O00241 398 aa1.76□□□□□ -2.13
SCFD1-219ENST00000556413 NME4O00746 187 aa1.76□□□□□ -2.13
SCFD1-219ENST00000556413 ENTPD5O75356 428 aa1.76□□□□□ -2.13
SCFD1-219ENST00000556413 LHBP01229 141 aa1.76□□□□□ -2.13
SCFD1-219ENST00000556413 IFNW1P05000 195 aa1.76□□□□□ -2.13
SCFD1-219ENST00000556413 IGF1P05019 195 aa1.76□□□□□ -2.13
SCFD1-219ENST00000556413 COX5BP10606 129 aa1.76□□□□□ -2.13
SCFD1-219ENST00000556413 HSD11B1P28845 292 aa1.76□□□□□ -2.13
SCFD1-219ENST00000556413 RRM2P31350 389 aa1.76□□□□□ -2.13
SCFD1-219ENST00000556413 KDELR2P33947 212 aa1.76□□□□□ -2.13
SCFD1-219ENST00000556413 TGFBR2P37173 567 aa1.76□□□□□ -2.13
SCFD1-219ENST00000556413 REG1BP48304 166 aa1.76□□□□□ -2.13
SCFD1-219ENST00000556413 RGS6P49758 472 aa1.76□□□□□ -2.13
SCFD1-219ENST00000556413 GNG10P50151 68 aa1.76□□□□□ -2.13
SCFD1-219ENST00000556413 CCR6P51684 374 aa1.76□□□□□ -2.13
SCFD1-219ENST00000556413 UBE2E1P51965 193 aa1.76□□□□□ -2.13
SCFD1-219ENST00000556413 ESRRGP62508 458 aa1.76□□□□□ -2.13
SCFD1-219ENST00000556413 SLC35A2P78381 396 aa1.76□□□□□ -2.13
SCFD1-219ENST00000556413 FAM3AP98173 230 aa1.76□□□□□ -2.13
SCFD1-219ENST00000556413 IL5RAQ01344 420 aa1.76□□□□□ -2.13
SCFD1-219ENST00000556413 ATXN7L3Q14CW9 347 aaPredicted RBP1.76□□□□□ -2.13
SCFD1-219ENST00000556413 ZNF181Q2M3W8 571 aa1.76□□□□□ -2.13
SCFD1-219ENST00000556413 LRRC10Q5BKY1 277 aa1.76□□□□□ -2.13
SCFD1-219ENST00000556413 CASC10Q5T4H9 136 aa1.76□□□□□ -2.13
SCFD1-219ENST00000556413 ACP7Q6ZNF0 438 aa1.76□□□□□ -2.13
SCFD1-219ENST00000556413 TRAPPC6BQ86SZ2 158 aa1.76□□□□□ -2.13
SCFD1-219ENST00000556413 LINC01551Q86U37 167 aa1.76□□□□□ -2.13
SCFD1-219ENST00000556413 ZNF429Q86V71 674 aa1.76□□□□□ -2.13
SCFD1-219ENST00000556413 ANGPTL5Q86XS5 388 aa1.76□□□□□ -2.13
SCFD1-219ENST00000556413 ZDHHC21Q8IVQ6 265 aa1.76□□□□□ -2.13
SCFD1-219ENST00000556413 HS3ST5Q8IZT8 346 aa1.76□□□□□ -2.13
SCFD1-219ENST00000556413 ASCC1Q8N9N2 400 aaKnown RBP1.76□□□□□ -2.13
SCFD1-219ENST00000556413 LY6G5BQ8NDX9 201 aa1.76□□□□□ -2.13
SCFD1-219ENST00000556413 OR5L1Q8NGL2 311 aa1.76□□□□□ -2.13
SCFD1-219ENST00000556413 ANGPTL6Q8NI99 470 aa1.76□□□□□ -2.13
SCFD1-219ENST00000556413 FAM81AQ8TBF8 368 aa1.76□□□□□ -2.13
SCFD1-219ENST00000556413 CHCHD10Q8WYQ3 142 aaPredicted RBP1.76□□□□□ -2.13
SCFD1-219ENST00000556413 SPTSSAQ969W0 71 aa1.76□□□□□ -2.13
SCFD1-219ENST00000556413 RNF170Q96K19 258 aa1.76□□□□□ -2.13
SCFD1-219ENST00000556413 TBX5Q99593 518 aa1.76□□□□□ -2.13
SCFD1-219ENST00000556413 KCTD14Q9BQ13 255 aaPredicted RBP1.76□□□□□ -2.13
SCFD1-219ENST00000556413 TMEM109Q9BVC6 243 aa1.76□□□□□ -2.13
SCFD1-219ENST00000556413 ALX4Q9H161 411 aaPredicted RBP1.76□□□□□ -2.13
SCFD1-219ENST00000556413 OR51V1Q9H2C8 321 aa1.76□□□□□ -2.13
SCFD1-219ENST00000556413 NIPAL2Q9H841 368 aa1.76□□□□□ -2.13
SCFD1-219ENST00000556413 NMNAT1Q9HAN9 279 aaPredicted RBP1.76□□□□□ -2.13
SCFD1-219ENST00000556413 WFDC1Q9HC57 220 aa1.76□□□□□ -2.13
SCFD1-219ENST00000556413 PALMDQ9NP74 551 aa1.76□□□□□ -2.13
SCFD1-219ENST00000556413 FGFR1OP2Q9NVK5 253 aa1.76□□□□□ -2.13
SCFD1-219ENST00000556413 STX18Q9P2W9 335 aaKnown RBP1.76□□□□□ -2.13
SCFD1-219ENST00000556413 CYB5R1Q9UHQ9 305 aa1.76□□□□□ -2.13
SCFD1-219ENST00000556413 ZNF222Q9UK12 451 aa1.76□□□□□ -2.13
SCFD1-219ENST00000556413 SIGLEC7Q9Y286 467 aa1.76□□□□□ -2.13
SCFD1-219ENST00000556413 ENPP4Q9Y6X5 453 aa1.76□□□□□ -2.13
SCFD1-219ENST00000556413 U3KQV3 271 aa1.76□□□□□ -2.13
SCFD1-219ENST00000556413 COL7A1Q02388 2944 aa1.76□□□□□ -2.13
SCFD1-219ENST00000556413 IGLV4-69A0A075B6H9 119 aa1.75□□□□□ -2.13
SCFD1-219ENST00000556413 IGLV2-33A0A075B6J2 118 aaPredicted RBP1.75□□□□□ -2.13
SCFD1-219ENST00000556413 IGHV2-26A0A0B4J1V2 119 aa1.75□□□□□ -2.13
SCFD1-219ENST00000556413 LCE6AA0A183 80 aa1.75□□□□□ -2.13
SCFD1-219ENST00000556413 A0A1B0GWJ7 208 aa1.75□□□□□ -2.13
SCFD1-219ENST00000556413 FAM230AA0A1W2PPH8 454 aa1.75□□□□□ -2.13
SCFD1-219ENST00000556413 ODF3BA8MYP8 253 aa1.75□□□□□ -2.13
SCFD1-219ENST00000556413 ZNF593O00488 134 aaPredicted RBP1.75□□□□□ -2.13
SCFD1-219ENST00000556413 EDF1O60869 148 aaKnown RBP1.75□□□□□ -2.13
SCFD1-219ENST00000556413 BAG2O95816 211 aa1.75□□□□□ -2.13
SCFD1-219ENST00000556413 MOSP00540 346 aa1.75□□□□□ -2.13
SCFD1-219ENST00000556413 IGF2P01344 180 aa1.75□□□□□ -2.13
SCFD1-219ENST00000556413 H2BFMP0C1H6 154 aa1.75□□□□□ -2.13
SCFD1-219ENST00000556413 SPI1P17947 270 aa1.75□□□□□ -2.13
SCFD1-219ENST00000556413 ATP6V1B2P21281 511 aa1.75□□□□□ -2.13
SCFD1-219ENST00000556413 PAICSP22234 425 aaKnown RBP1.75□□□□□ -2.13
SCFD1-219ENST00000556413 PTGFRP43088 359 aa1.75□□□□□ -2.13
SCFD1-219ENST00000556413 KIR2DS4P43632 304 aa1.75□□□□□ -2.13
SCFD1-219ENST00000556413 HAAOP46952 286 aa1.75□□□□□ -2.13
SCFD1-219ENST00000556413 TGM4P49221 684 aa1.75□□□□□ -2.13
SCFD1-219ENST00000556413 MRPL19P49406 292 aaKnown RBP1.75□□□□□ -2.13
SCFD1-219ENST00000556413 DLX6P56179 175 aa1.75□□□□□ -2.13
SCFD1-219ENST00000556413 LSM6P62312 80 aaKnown RBP1.75□□□□□ -2.13
SCFD1-219ENST00000556413 ACTA2P62736 377 aa1.75□□□□□ -2.13
SCFD1-219ENST00000556413 RPL31P62899 125 aaKnown RBP1.75□□□□□ -2.13
SCFD1-219ENST00000556413 ACTG2P63267 376 aa1.75□□□□□ -2.13
SCFD1-219ENST00000556413 SELENOWP63302 87 aa1.75□□□□□ -2.13
SCFD1-219ENST00000556413 ACTC1P68032 377 aa1.75□□□□□ -2.13
SCFD1-219ENST00000556413 ACTA1P68133 377 aa1.75□□□□□ -2.13
SCFD1-219ENST00000556413 HES1Q14469 280 aa1.75□□□□□ -2.13
SCFD1-219ENST00000556413 KCNJ8Q15842 424 aa1.75□□□□□ -2.13
SCFD1-219ENST00000556413 ANKDD1AQ495B1 522 aa1.75□□□□□ -2.13
SCFD1-219ENST00000556413 TMEM236Q5W0B7 351 aa1.75□□□□□ -2.13
SCFD1-219ENST00000556413 LPCAT4Q643R3 524 aa1.75□□□□□ -2.13
SCFD1-219ENST00000556413 NCR3LG1Q68D85 454 aa1.75□□□□□ -2.13
SCFD1-219ENST00000556413 PLBD1Q6P4A8 553 aa1.75□□□□□ -2.13
SCFD1-219ENST00000556413 DNM1P34Q6PK57 102 aa1.75□□□□□ -2.13
SCFD1-219ENST00000556413 SLC36A1Q7Z2H8 476 aa1.75□□□□□ -2.13
SCFD1-219ENST00000556413 OR2W3Q7Z3T1 314 aa1.75□□□□□ -2.13
SCFD1-219ENST00000556413 CYP4Z1Q86W10 505 aa1.75□□□□□ -2.13
SCFD1-219ENST00000556413 SBSPONQ8IVN8 264 aa1.75□□□□□ -2.13
SCFD1-219ENST00000556413 ZNF676Q8N7Q3 588 aa1.75□□□□□ -2.13
SCFD1-219ENST00000556413 OR52B4Q8NGK2 314 aa1.75□□□□□ -2.13
SCFD1-219ENST00000556413 OR5D18Q8NGL1 313 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms