RNA–Protein interactions for RNA: ENST00000554607.1

FOXA1-204, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 789 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-204ENST00000554607 PLGRKTQ9HBL7 147 aa18.3■□□□□ 0.52
FOXA1-204ENST00000554607 RBMY1BA6NDE4 496 aaKnown RBP18.29■□□□□ 0.52
FOXA1-204ENST00000554607 RBMY1EA6NEQ0 496 aaKnown RBP18.29■□□□□ 0.52
FOXA1-204ENST00000554607 SRRM4A7MD48 611 aaKnown RBP18.29■□□□□ 0.52
FOXA1-204ENST00000554607 TUSC2O75896 110 aa18.29■□□□□ 0.52
FOXA1-204ENST00000554607 UCHL1P09936 223 aa18.29■□□□□ 0.52
FOXA1-204ENST00000554607 RBMY1DP0C7P1 496 aaKnown RBP18.29■□□□□ 0.52
FOXA1-204ENST00000554607 RHOGP84095 191 aa18.29■□□□□ 0.52
FOXA1-204ENST00000554607 TPBGQ13641 420 aa18.29■□□□□ 0.52
FOXA1-204ENST00000554607 P2RY14Q15391 338 aa18.29■□□□□ 0.52
FOXA1-204ENST00000554607 FAM209BQ5JX69 171 aa18.29■□□□□ 0.52
FOXA1-204ENST00000554607 LAIR2Q6ISS4 152 aa18.29■□□□□ 0.52
FOXA1-204ENST00000554607 DEFB125Q8N687 156 aa18.29■□□□□ 0.52
FOXA1-204ENST00000554607 BPIFB6Q8NFQ5 453 aa18.29■□□□□ 0.52
FOXA1-204ENST00000554607 SRD5A3Q9H8P0 318 aa18.29■□□□□ 0.52
FOXA1-204ENST00000554607 OR11H12B2RN74 326 aa18.28■□□□□ 0.52
FOXA1-204ENST00000554607 BMPR1BO00238 502 aa18.28■□□□□ 0.52
FOXA1-204ENST00000554607 SLC17A2O00624 439 aa18.28■□□□□ 0.52
FOXA1-204ENST00000554607 RBMXL2O75526 392 aaKnown RBP18.28■□□□□ 0.52
FOXA1-204ENST00000554607 CD7P09564 240 aa18.28■□□□□ 0.52
FOXA1-204ENST00000554607 RANBP1P43487 201 aa18.28■□□□□ 0.52
FOXA1-204ENST00000554607 MRPS15P82914 257 aaKnown RBP18.28■□□□□ 0.52
FOXA1-204ENST00000554607 EXOSC2Q13868 293 aaKnown RBP18.28■□□□□ 0.52
FOXA1-204ENST00000554607 TNXAQ16473 311 aa18.28■□□□□ 0.52
FOXA1-204ENST00000554607 PRSS8Q16651 343 aa18.28■□□□□ 0.52
FOXA1-204ENST00000554607 OR56B1Q8NGI3 324 aa18.28■□□□□ 0.52
FOXA1-204ENST00000554607 OR10J5Q8NHC4 309 aa18.28■□□□□ 0.52
FOXA1-204ENST00000554607 KCTD12Q96CX2 325 aaKnown RBP18.28■□□□□ 0.52
FOXA1-204ENST00000554607 AKIP1Q9NQ31 210 aa18.28■□□□□ 0.52
FOXA1-204ENST00000554607 ZNF230Q9UIE0 474 aaPredicted RBP18.28■□□□□ 0.52
FOXA1-204ENST00000554607 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP18.27■□□□□ 0.52
FOXA1-204ENST00000554607 FABP7O15540 132 aa18.27■□□□□ 0.52
FOXA1-204ENST00000554607 UBE2KP61086 200 aa18.27■□□□□ 0.52
FOXA1-204ENST00000554607 MRGPRG-AS1Q2M3A8 158 aa18.27■□□□□ 0.52
FOXA1-204ENST00000554607 DEFB114Q30KQ6 69 aa18.27■□□□□ 0.52
FOXA1-204ENST00000554607 SRSF12Q8WXF0 261 aaKnown RBP18.27■□□□□ 0.52
FOXA1-204ENST00000554607 ADTRPQ96IZ2 230 aa18.27■□□□□ 0.52
FOXA1-204ENST00000554607 FKBP14Q9NWM8 211 aa18.27■□□□□ 0.52
FOXA1-204ENST00000554607 TECRQ9NZ01 308 aaKnown RBP18.27■□□□□ 0.52
FOXA1-204ENST00000554607 BET1O15155 118 aa18.26■□□□□ 0.51
FOXA1-204ENST00000554607 DIRAS3O95661 229 aa18.26■□□□□ 0.51
FOXA1-204ENST00000554607 RAB11BQ15907 218 aa18.26■□□□□ 0.51
FOXA1-204ENST00000554607 GUCA2BQ16661 112 aa18.26■□□□□ 0.51
FOXA1-204ENST00000554607 FBLIM1Q8WUP2 373 aa18.26■□□□□ 0.51
FOXA1-204ENST00000554607 RBM7Q9Y580 266 aaKnown RBP18.26■□□□□ 0.51
FOXA1-204ENST00000554607 TRBV9A0A0B4J1U6 114 aa18.25■□□□□ 0.51
FOXA1-204ENST00000554607 CREBL2O60519 120 aaPredicted RBP18.25■□□□□ 0.51
FOXA1-204ENST00000554607 GNAO1P09471 354 aa18.25■□□□□ 0.51
FOXA1-204ENST00000554607 CD3GP09693 182 aa18.25■□□□□ 0.51
FOXA1-204ENST00000554607 KIR2DS2P43631 304 aa18.25■□□□□ 0.51
FOXA1-204ENST00000554607 SPHARQ15513 63 aa18.25■□□□□ 0.51
FOXA1-204ENST00000554607 NECAP1Q8NC96 275 aa18.25■□□□□ 0.51
FOXA1-204ENST00000554607 ACOT12Q8WYK0 555 aa18.25■□□□□ 0.51
FOXA1-204ENST00000554607 SPIN2AQ99865 258 aa18.25■□□□□ 0.51
FOXA1-204ENST00000554607 SPIN2BQ9BPZ2 258 aa18.25■□□□□ 0.51
FOXA1-204ENST00000554607 CABLES2Q9BTV7 478 aa18.25■□□□□ 0.51
FOXA1-204ENST00000554607 TRBV6-7A0A0A0MS04 114 aa18.24■□□□□ 0.51
FOXA1-204ENST00000554607 ERICH4A6NGS2 130 aa18.24■□□□□ 0.51
FOXA1-204ENST00000554607 ACTL6BO94805 426 aa18.24■□□□□ 0.51
FOXA1-204ENST00000554607 CDK1P06493 297 aa18.24■□□□□ 0.51
FOXA1-204ENST00000554607 IGSF11Q5DX21 431 aa18.24■□□□□ 0.51
FOXA1-204ENST00000554607 PLAC9Q5JTB6 97 aa18.24■□□□□ 0.51
FOXA1-204ENST00000554607 OSR1Q8TAX0 266 aaPredicted RBP18.24■□□□□ 0.51
FOXA1-204ENST00000554607 ZC4H2Q9NQZ6 224 aa18.24■□□□□ 0.51
FOXA1-204ENST00000554607 CRYZL1O95825 349 aa18.23■□□□□ 0.51
FOXA1-204ENST00000554607 PRH1P02810 166 aa18.23■□□□□ 0.51
FOXA1-204ENST00000554607 FOLR2P14207 255 aa18.23■□□□□ 0.51
FOXA1-204ENST00000554607 ZNF45Q02386 682 aa18.23■□□□□ 0.51
FOXA1-204ENST00000554607 SLC16A13Q7RTY0 426 aa18.23■□□□□ 0.51
FOXA1-204ENST00000554607 SLC25A42Q86VD7 318 aa18.23■□□□□ 0.51
FOXA1-204ENST00000554607 TTC9CQ8N5M4 171 aa18.23■□□□□ 0.51
FOXA1-204ENST00000554607 GFI1Q99684 422 aa18.23■□□□□ 0.51
FOXA1-204ENST00000554607 CENPOQ9BU64 300 aa18.23■□□□□ 0.51
FOXA1-204ENST00000554607 AK6Q9Y3D8 172 aaKnown RBP18.23■□□□□ 0.51
FOXA1-204ENST00000554607 C2orf70A6NJV1 201 aa18.22■□□□□ 0.51
FOXA1-204ENST00000554607 DENRO43583 198 aaKnown RBP18.22■□□□□ 0.51
FOXA1-204ENST00000554607 GSTT2P0CG29 244 aa18.22■□□□□ 0.51
FOXA1-204ENST00000554607 GSTT2BP0CG30 244 aa18.22■□□□□ 0.51
FOXA1-204ENST00000554607 MED22Q15528 200 aa18.22■□□□□ 0.51
FOXA1-204ENST00000554607 IDO2Q6ZQW0 420 aa18.22■□□□□ 0.51
FOXA1-204ENST00000554607 LINC00476Q8WZB0 136 aa18.22■□□□□ 0.51
FOXA1-204ENST00000554607 DDB2Q92466 427 aa18.22■□□□□ 0.51
FOXA1-204ENST00000554607 UFD1Q92890 307 aa18.22■□□□□ 0.51
FOXA1-204ENST00000554607 FAM3DQ96BQ1 224 aa18.22■□□□□ 0.51
FOXA1-204ENST00000554607 C5orf30Q96GV9 206 aa18.22■□□□□ 0.51
FOXA1-204ENST00000554607 WFDC10AQ9H1F0 79 aa18.22■□□□□ 0.51
FOXA1-204ENST00000554607 LGALS9O00182 355 aa18.21■□□□□ 0.51
FOXA1-204ENST00000554607 GGCTO75223 188 aaKnown RBP18.21■□□□□ 0.51
FOXA1-204ENST00000554607 ARL6IP5O75915 188 aa18.21■□□□□ 0.51
FOXA1-204ENST00000554607 FCGR3AP08637 254 aa18.21■□□□□ 0.51
FOXA1-204ENST00000554607 DUTP33316 252 aaKnown RBP18.21■□□□□ 0.51
FOXA1-204ENST00000554607 C15orf32Q32M92 178 aa18.21■□□□□ 0.51
FOXA1-204ENST00000554607 C2orf76Q3KRA6 126 aa18.21■□□□□ 0.51
FOXA1-204ENST00000554607 MMD2Q8IY49 270 aa18.21■□□□□ 0.51
FOXA1-204ENST00000554607 TMEM203Q969S6 136 aa18.21■□□□□ 0.51
FOXA1-204ENST00000554607 GINS4Q9BRT9 223 aa18.21■□□□□ 0.51
FOXA1-204ENST00000554607 LSM2Q9Y333 95 aaKnown RBP18.21■□□□□ 0.51
FOXA1-204ENST00000554607 MAP2K4P45985 399 aa18.2■□□□□ 0.5
FOXA1-204ENST00000554607 CDK10Q15131 360 aa18.2■□□□□ 0.5
FOXA1-204ENST00000554607 TRAM1Q15629 374 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms