RNA–Protein interactions for RNA: ENST00000546000.1

CADM1-220, Transcript of cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CADM1, Length 734 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CADM1-220ENST00000546000 IL5P05113 134 aa13.67□□□□□ -0.22
CADM1-220ENST00000546000 SNRNP70P08621 437 aaKnown RBP13.67□□□□□ -0.22
CADM1-220ENST00000546000 LPAR6P43657 344 aa13.67□□□□□ -0.22
CADM1-220ENST00000546000 RAG2P55895 527 aa13.67□□□□□ -0.22
CADM1-220ENST00000546000 Q6ZNX1 250 aa13.67□□□□□ -0.22
CADM1-220ENST00000546000 GLYATL2Q8WU03 294 aa13.67□□□□□ -0.22
CADM1-220ENST00000546000 ADTRPQ96IZ2 230 aa13.67□□□□□ -0.22
CADM1-220ENST00000546000 WASHC3Q9Y3C0 194 aa13.67□□□□□ -0.22
CADM1-220ENST00000546000 FAM96BQ9Y3D0 163 aa13.67□□□□□ -0.22
CADM1-220ENST00000546000 OOSP1A8MZH6 123 aa13.66□□□□□ -0.22
CADM1-220ENST00000546000 DHFRP00374 187 aa13.66□□□□□ -0.22
CADM1-220ENST00000546000 IGKV1D-33P01593 117 aa13.66□□□□□ -0.22
CADM1-220ENST00000546000 IGKV1-33P01594 117 aa13.66□□□□□ -0.22
CADM1-220ENST00000546000 FBP1P09467 338 aa13.66□□□□□ -0.22
CADM1-220ENST00000546000 UCP1P25874 307 aa13.66□□□□□ -0.22
CADM1-220ENST00000546000 CNTFRP26992 372 aa13.66□□□□□ -0.22
CADM1-220ENST00000546000 HNF4GQ14541 408 aa13.66□□□□□ -0.22
CADM1-220ENST00000546000 CCDC144NLQ6NUI1 221 aa13.66□□□□□ -0.22
CADM1-220ENST00000546000 C9orf139Q6ZV77 190 aa13.66□□□□□ -0.22
CADM1-220ENST00000546000 VKORC1L1Q8N0U8 176 aa13.66□□□□□ -0.22
CADM1-220ENST00000546000 ZNF431Q8TF32 576 aaPredicted RBP13.66□□□□□ -0.22
CADM1-220ENST00000546000 GALNT14Q96FL9 552 aa13.66□□□□□ -0.22
CADM1-220ENST00000546000 TMEM222Q9H0R3 208 aa13.66□□□□□ -0.22
CADM1-220ENST00000546000 ALX4Q9H161 411 aaPredicted RBP13.66□□□□□ -0.22
CADM1-220ENST00000546000 PRELID3BQ9Y3B1 194 aa13.66□□□□□ -0.22
CADM1-220ENST00000546000 A0A0G2JRQ6 117 aa13.65□□□□□ -0.22
CADM1-220ENST00000546000 C7orf66A4D0T2 115 aa13.65□□□□□ -0.22
CADM1-220ENST00000546000 HNF1AP20823 631 aa13.65□□□□□ -0.22
CADM1-220ENST00000546000 HABP2Q14520 560 aaPredicted RBP13.65□□□□□ -0.22
CADM1-220ENST00000546000 RTL8BQ17RB0 113 aa13.65□□□□□ -0.22
CADM1-220ENST00000546000 IZUMO4Q1ZYL8 232 aa13.65□□□□□ -0.22
CADM1-220ENST00000546000 C2orf68Q2NKX9 166 aa13.65□□□□□ -0.22
CADM1-220ENST00000546000 LIAT1Q6ZQX7 453 aa13.65□□□□□ -0.22
CADM1-220ENST00000546000 UXS1Q8NBZ7 420 aa13.65□□□□□ -0.22
CADM1-220ENST00000546000 OR4S2Q8NH73 311 aa13.65□□□□□ -0.22
CADM1-220ENST00000546000 PIFOQ8TCI5 191 aa13.65□□□□□ -0.22
CADM1-220ENST00000546000 TNFRSF19Q9NS68 423 aa13.65□□□□□ -0.22
CADM1-220ENST00000546000 H3BUX3 64 aa13.64□□□□□ -0.23
CADM1-220ENST00000546000 CCSO14618 274 aa13.64□□□□□ -0.23
CADM1-220ENST00000546000 PRAF2O60831 178 aa13.64□□□□□ -0.23
CADM1-220ENST00000546000 IGHV4-59P01825 116 aa13.64□□□□□ -0.23
CADM1-220ENST00000546000 SERPINE2P07093 398 aa13.64□□□□□ -0.23
CADM1-220ENST00000546000 KIR2DS2P43631 304 aa13.64□□□□□ -0.23
CADM1-220ENST00000546000 HES1Q14469 280 aa13.64□□□□□ -0.23
CADM1-220ENST00000546000 LY6EQ16553 131 aa13.64□□□□□ -0.23
CADM1-220ENST00000546000 LRRC75BQ2VPJ9 315 aa13.64□□□□□ -0.23
CADM1-220ENST00000546000 TMEM268Q5VZI3 342 aa13.64□□□□□ -0.23
CADM1-220ENST00000546000 SSX9Q7RTT3 188 aa13.64□□□□□ -0.23
CADM1-220ENST00000546000 TMEM219Q86XT9 240 aa13.64□□□□□ -0.23
CADM1-220ENST00000546000 PDPNQ86YL7 162 aa13.64□□□□□ -0.23
CADM1-220ENST00000546000 SELENOHQ8IZQ5 122 aaKnown RBP13.64□□□□□ -0.23
CADM1-220ENST00000546000 SIGLECL1Q8N7X8 197 aa13.64□□□□□ -0.23
CADM1-220ENST00000546000 HARBI1Q96MB7 349 aa13.64□□□□□ -0.23
CADM1-220ENST00000546000 SSX3Q99909 188 aa13.64□□□□□ -0.23
CADM1-220ENST00000546000 MEGF9Q9H1U4 602 aa13.64□□□□□ -0.23
CADM1-220ENST00000546000 OR51J1Q9H342 316 aa13.64□□□□□ -0.23
CADM1-220ENST00000546000 TMEM160Q9NX00 188 aa13.64□□□□□ -0.23
CADM1-220ENST00000546000 SRRM4A7MD48 611 aaKnown RBP13.63□□□□□ -0.23
CADM1-220ENST00000546000 CREBL2O60519 120 aaPredicted RBP13.63□□□□□ -0.23
CADM1-220ENST00000546000 ADAP1O75689 374 aa13.63□□□□□ -0.23
CADM1-220ENST00000546000 DUS4LO95620 317 aaKnown RBP13.63□□□□□ -0.23
CADM1-220ENST00000546000 IGKV1-5P01602 117 aa13.63□□□□□ -0.23
CADM1-220ENST00000546000 CD1BP29016 333 aa13.63□□□□□ -0.23
CADM1-220ENST00000546000 G6PCP35575 357 aa13.63□□□□□ -0.23
CADM1-220ENST00000546000 BPIFB3P59826 476 aa13.63□□□□□ -0.23
CADM1-220ENST00000546000 LYZL2Q7Z4W2 148 aa13.63□□□□□ -0.23
CADM1-220ENST00000546000 SLC35G3Q8N808 338 aa13.63□□□□□ -0.23
CADM1-220ENST00000546000 MITD1Q8WV92 249 aa13.63□□□□□ -0.23
CADM1-220ENST00000546000 EAF1Q96JC9 268 aaPredicted RBP13.63□□□□□ -0.23
CADM1-220ENST00000546000 GPN1Q9HCN4 374 aaPredicted RBP13.63□□□□□ -0.23
CADM1-220ENST00000546000 TPSG1Q9NRR2 321 aa13.63□□□□□ -0.23
CADM1-220ENST00000546000 KCNIP3Q9Y2W7 256 aa13.63□□□□□ -0.23
CADM1-220ENST00000546000 FAM90A9PA6NNJ1 464 aa13.62□□□□□ -0.23
CADM1-220ENST00000546000 SHOXO15266 292 aa13.62□□□□□ -0.23
CADM1-220ENST00000546000 RBFOX2O43251 390 aaKnown RBP eCLIP13.62□□□□□ -0.23
CADM1-220ENST00000546000 HOXB5P09067 269 aa13.62□□□□□ -0.23
CADM1-220ENST00000546000 ANXA3P12429 323 aa13.62□□□□□ -0.23
CADM1-220ENST00000546000 TMEM11P17152 192 aa13.62□□□□□ -0.23
CADM1-220ENST00000546000 RPS16P62249 146 aaKnown RBP13.62□□□□□ -0.23
CADM1-220ENST00000546000 TAGLNQ01995 201 aaKnown RBP13.62□□□□□ -0.23
CADM1-220ENST00000546000 TMEM177Q53S58 311 aa13.62□□□□□ -0.23
CADM1-220ENST00000546000 ZNF695Q8IW36 515 aa13.62□□□□□ -0.23
CADM1-220ENST00000546000 C12orf45Q8N5I9 185 aaPredicted RBP13.62□□□□□ -0.23
CADM1-220ENST00000546000 TEX29Q8N6K0 151 aa13.62□□□□□ -0.23
CADM1-220ENST00000546000 ZDHHC16Q969W1 377 aa13.62□□□□□ -0.23
CADM1-220ENST00000546000 R3HDM4Q96D70 268 aa13.62□□□□□ -0.23
CADM1-220ENST00000546000 TMEM56Q96MV1 263 aa13.62□□□□□ -0.23
CADM1-220ENST00000546000 DUX5Q96PT3 197 aa13.62□□□□□ -0.23
CADM1-220ENST00000546000 TMEM56-RWDD3S4R434 201 aa13.62□□□□□ -0.23
CADM1-220ENST00000546000 HIVEP2P31629 2446 aa13.62□□□□□ -0.23
CADM1-220ENST00000546000 MPTX1A8MV57 137 aa13.61□□□□□ -0.23
CADM1-220ENST00000546000 VGLL3A8MV65 326 aa13.61□□□□□ -0.23
CADM1-220ENST00000546000 SNRPGP15A8MWD9 76 aa13.61□□□□□ -0.23
CADM1-220ENST00000546000 SSNA1O43805 119 aa13.61□□□□□ -0.23
CADM1-220ENST00000546000 CDS2O95674 445 aa13.61□□□□□ -0.23
CADM1-220ENST00000546000 KRASP01116 189 aa13.61□□□□□ -0.23
CADM1-220ENST00000546000 IGLV2-23P01705 113 aa13.61□□□□□ -0.23
CADM1-220ENST00000546000 SAA1P0DJI8 122 aaPredicted RBP13.61□□□□□ -0.23
CADM1-220ENST00000546000 SRD5A1P18405 259 aa13.61□□□□□ -0.23
CADM1-220ENST00000546000 MC5RP33032 325 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms