RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 HSBP1O75506 76 aa2.43□□□□□ -2.02
USP28-210ENST00000542033 REM1O75628 298 aa2.43□□□□□ -2.02
USP28-210ENST00000542033 SCRG1O75711 98 aa2.43□□□□□ -2.02
USP28-210ENST00000542033 APOA2P02652 100 aa2.43□□□□□ -2.02
USP28-210ENST00000542033 CTSDP07339 412 aaPredicted RBP2.43□□□□□ -2.02
USP28-210ENST00000542033 SFTA3P0C7M3 94 aa2.43□□□□□ -2.02
USP28-210ENST00000542033 SLC35G6P0C7Q6 338 aa2.43□□□□□ -2.02
USP28-210ENST00000542033 OR12D1P0DN82 309 aa2.43□□□□□ -2.02
USP28-210ENST00000542033 TPT1P13693 172 aaKnown RBP2.43□□□□□ -2.02
USP28-210ENST00000542033 CTSEP14091 401 aa2.43□□□□□ -2.02
USP28-210ENST00000542033 HIST1H1DP16402 221 aaKnown RBP2.43□□□□□ -2.02
USP28-210ENST00000542033 ATF1P18846 271 aa2.43□□□□□ -2.02
USP28-210ENST00000542033 EVI2AP22794 236 aa2.43□□□□□ -2.02
USP28-210ENST00000542033 IGHV1-2P23083 117 aa2.43□□□□□ -2.02
USP28-210ENST00000542033 NPY1RP25929 384 aa2.43□□□□□ -2.02
USP28-210ENST00000542033 CDKN2BP42772 138 aa2.43□□□□□ -2.02
USP28-210ENST00000542033 XCR1P46094 333 aa2.43□□□□□ -2.02
USP28-210ENST00000542033 RGRP47804 291 aa2.43□□□□□ -2.02
USP28-210ENST00000542033 MARCKSL1P49006 195 aa2.43□□□□□ -2.02
USP28-210ENST00000542033 PRLHRP49683 370 aa2.43□□□□□ -2.02
USP28-210ENST00000542033 GPM6AP51674 278 aa2.43□□□□□ -2.02
USP28-210ENST00000542033 DLX6P56179 175 aa2.43□□□□□ -2.02
USP28-210ENST00000542033 TAS2R31P59538 309 aa2.43□□□□□ -2.02
USP28-210ENST00000542033 TAS2R19P59542 299 aa2.43□□□□□ -2.02
USP28-210ENST00000542033 TAS2R20P59543 309 aa2.43□□□□□ -2.02
USP28-210ENST00000542033 UBE2NP61088 152 aaKnown RBP2.43□□□□□ -2.02
USP28-210ENST00000542033 LCN6P62502 163 aa2.43□□□□□ -2.02
USP28-210ENST00000542033 PAFAH1B2P68402 229 aa2.43□□□□□ -2.02
USP28-210ENST00000542033 BTG2P78543 158 aa2.43□□□□□ -2.02
USP28-210ENST00000542033 CRADDP78560 199 aa2.43□□□□□ -2.02
USP28-210ENST00000542033 HIST1H1AQ02539 215 aaPredicted RBP2.43□□□□□ -2.02
USP28-210ENST00000542033 ST3GAL4Q11206 333 aa2.43□□□□□ -2.02
USP28-210ENST00000542033 MAD2L1BPQ15013 274 aaPredicted RBP2.43□□□□□ -2.02
USP28-210ENST00000542033 PMVKQ15126 192 aa2.43□□□□□ -2.02
USP28-210ENST00000542033 RGNQ15493 299 aa2.43□□□□□ -2.02
USP28-210ENST00000542033 OR1Q1Q15612 314 aa2.43□□□□□ -2.02
USP28-210ENST00000542033 ZNF77Q15935 545 aa2.43□□□□□ -2.02
USP28-210ENST00000542033 HIST3H3Q16695 136 aa2.43□□□□□ -2.02
USP28-210ENST00000542033 SPANXN3Q5MJ09 141 aa2.43□□□□□ -2.02
USP28-210ENST00000542033 FAM162BQ5T6X4 162 aa2.43□□□□□ -2.02
USP28-210ENST00000542033 MRPL54Q6P161 138 aaKnown RBP2.43□□□□□ -2.02
USP28-210ENST00000542033 OPN5Q6U736 354 aa2.43□□□□□ -2.02
USP28-210ENST00000542033 FOXI2Q6ZQN5 318 aa2.43□□□□□ -2.02
USP28-210ENST00000542033 ZNF621Q6ZSS3 439 aa2.43□□□□□ -2.02
USP28-210ENST00000542033 ZCCHC23Q6ZST2 131 aa2.43□□□□□ -2.02
USP28-210ENST00000542033 APRG1Q8IVJ8 170 aa2.43□□□□□ -2.02
USP28-210ENST00000542033 CMTM1Q8IZ96 169 aa2.43□□□□□ -2.02
USP28-210ENST00000542033 FAM71E2Q8N5Q1 922 aa2.43□□□□□ -2.02
USP28-210ENST00000542033 COX18Q8N8Q8 333 aa2.43□□□□□ -2.02
USP28-210ENST00000542033 C5orf17Q8NAS9 161 aa2.43□□□□□ -2.02
USP28-210ENST00000542033 OR5A1Q8NGJ0 315 aa2.43□□□□□ -2.02
USP28-210ENST00000542033 OR51T1Q8NGJ9 327 aa2.43□□□□□ -2.02
USP28-210ENST00000542033 SYNPRQ8TBG9 265 aa2.43□□□□□ -2.02
USP28-210ENST00000542033 Q8WTZ3 238 aa2.43□□□□□ -2.02
USP28-210ENST00000542033 PSMF1Q92530 271 aa2.43□□□□□ -2.02
USP28-210ENST00000542033 DCUN1D4Q92564 292 aa2.43□□□□□ -2.02
USP28-210ENST00000542033 FGGYQ96C11 551 aa2.43□□□□□ -2.02
USP28-210ENST00000542033 LRRC58Q96CX6 371 aa2.43□□□□□ -2.02
USP28-210ENST00000542033 MUCL1Q96DR8 90 aa2.43□□□□□ -2.02
USP28-210ENST00000542033 SLAMF6Q96DU3 332 aa2.43□□□□□ -2.02
USP28-210ENST00000542033 SMIM19Q96E16 107 aa2.43□□□□□ -2.02
USP28-210ENST00000542033 IMP4Q96G21 291 aaKnown RBP2.43□□□□□ -2.02
USP28-210ENST00000542033 SEC22AQ96IW7 307 aa2.43□□□□□ -2.02
USP28-210ENST00000542033 KCTD7Q96MP8 289 aa2.43□□□□□ -2.02
USP28-210ENST00000542033 CCDC115Q96NT0 180 aa2.43□□□□□ -2.02
USP28-210ENST00000542033 TBX5Q99593 518 aa2.43□□□□□ -2.02
USP28-210ENST00000542033 PITX2Q99697 317 aa2.43□□□□□ -2.02
USP28-210ENST00000542033 MCHR1Q99705 422 aa2.43□□□□□ -2.02
USP28-210ENST00000542033 GINS3Q9BRX5 216 aa2.43□□□□□ -2.02
USP28-210ENST00000542033 ADAT1Q9BUB4 502 aaKnown RBP2.43□□□□□ -2.02
USP28-210ENST00000542033 EFCAB11Q9BUY7 163 aa2.43□□□□□ -2.02
USP28-210ENST00000542033 SAMD10Q9BYL1 202 aa2.43□□□□□ -2.02
USP28-210ENST00000542033 OR11A1Q9GZK7 315 aa2.43□□□□□ -2.02
USP28-210ENST00000542033 MAP1LC3BQ9GZQ8 125 aa2.43□□□□□ -2.02
USP28-210ENST00000542033 GPR84Q9NQS5 396 aa2.43□□□□□ -2.02
USP28-210ENST00000542033 INPP5EQ9NRR6 644 aa2.43□□□□□ -2.02
USP28-210ENST00000542033 DNAJC27Q9NZQ0 273 aa2.43□□□□□ -2.02
USP28-210ENST00000542033 CCDC167Q9P0B6 97 aa2.43□□□□□ -2.02
USP28-210ENST00000542033 SPRR3Q9UBC9 169 aa2.43□□□□□ -2.02
USP28-210ENST00000542033 RPS6KB2Q9UBS0 482 aa2.43□□□□□ -2.02
USP28-210ENST00000542033 TNFSF18Q9UNG2 199 aa2.43□□□□□ -2.02
USP28-210ENST00000542033 HDGFL3Q9Y3E1 203 aa2.43□□□□□ -2.02
USP28-210ENST00000542033 ENPP4Q9Y6X5 453 aa2.43□□□□□ -2.02
USP28-210ENST00000542033 V9GYY9 64 aa2.43□□□□□ -2.02
USP28-210ENST00000542033 PLIN4Q96Q06 1357 aa2.43□□□□□ -2.02
USP28-210ENST00000542033 DIP2CQ9Y2E4 1556 aa2.43□□□□□ -2.02
USP28-210ENST00000542033 ZFC3H1O60293 1989 aaKnown RBP2.43□□□□□ -2.02
USP28-210ENST00000542033 COL22A1Q8NFW1 1626 aaPredicted RBP2.42□□□□□ -2.02
USP28-210ENST00000542033 BAZ2AQ9UIF9 1905 aaKnown RBP2.42□□□□□ -2.02
USP28-210ENST00000542033 C5P01031 1676 aa2.42□□□□□ -2.02
USP28-210ENST00000542033 PLCH1Q4KWH8 1693 aa2.42□□□□□ -2.02
USP28-210ENST00000542033 TRBV24-1A0A075B6N3 115 aa2.42□□□□□ -2.02
USP28-210ENST00000542033 hCG_1818297A0A087WSY0 165 aa2.42□□□□□ -2.02
USP28-210ENST00000542033 A0A087WUU8 490 aa2.42□□□□□ -2.02
USP28-210ENST00000542033 SMIM28A0A1B0GU29 152 aa2.42□□□□□ -2.02
USP28-210ENST00000542033 A0A1B0GUS0 222 aa2.42□□□□□ -2.02
USP28-210ENST00000542033 LOC285095A0A1B0GVY8 99 aa2.42□□□□□ -2.02
USP28-210ENST00000542033 hADV38S2A0JD32 116 aa2.42□□□□□ -2.02
USP28-210ENST00000542033 IRGMA1A4Y4 181 aa2.42□□□□□ -2.02
USP28-210ENST00000542033 FAM183AA6NL82 134 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 143.5 ms