RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 MFSD4AQ8N468 514 aa17.87■□□□□ 0.45
SFSWAP-204ENST00000535399 ZBTB34Q8NCN2 500 aa17.87■□□□□ 0.45
SFSWAP-204ENST00000535399 HARBI1Q96MB7 349 aa17.87■□□□□ 0.45
SFSWAP-204ENST00000535399 TPSG1Q9NRR2 321 aa17.87■□□□□ 0.45
SFSWAP-204ENST00000535399 TAS2R8Q9NYW2 309 aa17.87■□□□□ 0.45
SFSWAP-204ENST00000535399 VWFP04275 2813 aa17.87■□□□□ 0.45
SFSWAP-204ENST00000535399 GABARAPH6UMI1 98 aa17.86■□□□□ 0.45
SFSWAP-204ENST00000535399 SHOXO15266 292 aa17.86■□□□□ 0.45
SFSWAP-204ENST00000535399 FCGR3BO75015 233 aa17.86■□□□□ 0.45
SFSWAP-204ENST00000535399 CRYGBP07316 175 aa17.86■□□□□ 0.45
SFSWAP-204ENST00000535399 CSF1P09603 554 aa17.86■□□□□ 0.45
SFSWAP-204ENST00000535399 TNFSF8P32971 234 aa17.86■□□□□ 0.45
SFSWAP-204ENST00000535399 BRWD1-AS2P59051 145 aa17.86■□□□□ 0.45
SFSWAP-204ENST00000535399 CX3CL1P78423 397 aa17.86■□□□□ 0.45
SFSWAP-204ENST00000535399 CFHR3Q02985 330 aa17.86■□□□□ 0.45
SFSWAP-204ENST00000535399 NSUN5P1Q3KNT7 163 aa17.86■□□□□ 0.45
SFSWAP-204ENST00000535399 VAX1Q5SQQ9 334 aa17.86■□□□□ 0.45
SFSWAP-204ENST00000535399 ZNF66Q6ZN08 573 aa17.86■□□□□ 0.45
SFSWAP-204ENST00000535399 TMEM17Q86X19 198 aa17.86■□□□□ 0.45
SFSWAP-204ENST00000535399 OR6F1Q8NGZ6 308 aa17.86■□□□□ 0.45
SFSWAP-204ENST00000535399 FCAMRQ8WWV6 532 aa17.86■□□□□ 0.45
SFSWAP-204ENST00000535399 SOSTQ9BQB4 213 aa17.86■□□□□ 0.45
SFSWAP-204ENST00000535399 PRELID3BQ9Y3B1 194 aa17.86■□□□□ 0.45
SFSWAP-204ENST00000535399 PKD1L1Q8TDX9 2849 aa17.86■□□□□ 0.45
SFSWAP-204ENST00000535399 TCRBV4S1A1TA0A5B7 111 aa17.85■□□□□ 0.45
SFSWAP-204ENST00000535399 ATP6V0E1O15342 81 aa17.85■□□□□ 0.45
SFSWAP-204ENST00000535399 TNFSF12O43508 249 aa17.85■□□□□ 0.45
SFSWAP-204ENST00000535399 GNRHRP30968 328 aa17.85■□□□□ 0.45
SFSWAP-204ENST00000535399 SLC35B1P78383 322 aa17.85■□□□□ 0.45
SFSWAP-204ENST00000535399 MRPS10P82664 201 aaKnown RBP17.85■□□□□ 0.45
SFSWAP-204ENST00000535399 ACTBL2Q562R1 376 aa17.85■□□□□ 0.45
SFSWAP-204ENST00000535399 OR2B11Q5JQS5 317 aa17.85■□□□□ 0.45
SFSWAP-204ENST00000535399 TREML4Q6UXN2 200 aa17.85■□□□□ 0.45
SFSWAP-204ENST00000535399 ZNF818PQ6ZRF7 136 aa17.85■□□□□ 0.45
SFSWAP-204ENST00000535399 CMYA5Q8N3K9 4069 aa17.85■□□□□ 0.45
SFSWAP-204ENST00000535399 TCTEX1D2Q8WW35 142 aa17.85■□□□□ 0.45
SFSWAP-204ENST00000535399 CLCC1Q96S66 551 aa17.85■□□□□ 0.45
SFSWAP-204ENST00000535399 FXYD6Q9H0Q3 95 aa17.85■□□□□ 0.45
SFSWAP-204ENST00000535399 PARP11Q9NR21 331 aa17.85■□□□□ 0.45
SFSWAP-204ENST00000535399 RABL2AQ9UBK7 228 aaPredicted RBP17.85■□□□□ 0.45
SFSWAP-204ENST00000535399 RABL2BQ9UNT1 228 aa17.85■□□□□ 0.45
SFSWAP-204ENST00000535399 M0QYG6 137 aa17.84■□□□□ 0.45
SFSWAP-204ENST00000535399 CTDSPLO15194 276 aa17.84■□□□□ 0.45
SFSWAP-204ENST00000535399 OPN1MWP04001 364 aa17.84■□□□□ 0.45
SFSWAP-204ENST00000535399 OPN1MW2P0DN77 364 aa17.84■□□□□ 0.45
SFSWAP-204ENST00000535399 OPN1MW3P0DN78 364 aa17.84■□□□□ 0.45
SFSWAP-204ENST00000535399 IL18Q14116 193 aa17.84■□□□□ 0.45
SFSWAP-204ENST00000535399 COMMD1Q8N668 190 aa17.84■□□□□ 0.45
SFSWAP-204ENST00000535399 OSR1Q8TAX0 266 aaPredicted RBP17.84■□□□□ 0.45
SFSWAP-204ENST00000535399 SMIM4Q8WVI0 70 aa17.84■□□□□ 0.45
SFSWAP-204ENST00000535399 GON7Q9BXV9 100 aa17.84■□□□□ 0.45
SFSWAP-204ENST00000535399 FBXO7Q9Y3I1 522 aa17.84■□□□□ 0.45
SFSWAP-204ENST00000535399 TSSC4Q9Y5U2 329 aaPredicted RBP17.84■□□□□ 0.45
SFSWAP-204ENST00000535399 A3GALT2U3KPV4 340 aa17.84■□□□□ 0.45
SFSWAP-204ENST00000535399 TET2Q6N021 2002 aaPredicted RBP17.84■□□□□ 0.45
SFSWAP-204ENST00000535399 CA2P00918 260 aa17.83■□□□□ 0.44
SFSWAP-204ENST00000535399 CD3DP04234 171 aa17.83■□□□□ 0.44
SFSWAP-204ENST00000535399 EGR2P11161 476 aaPredicted RBP17.83■□□□□ 0.44
SFSWAP-204ENST00000535399 VDAC1P21796 283 aa17.83■□□□□ 0.44
SFSWAP-204ENST00000535399 CRIP2P52943 208 aaPredicted RBP17.83■□□□□ 0.44
SFSWAP-204ENST00000535399 TSPAN5P62079 268 aa17.83■□□□□ 0.44
SFSWAP-204ENST00000535399 ZNF562Q6V9R5 426 aa17.83■□□□□ 0.44
SFSWAP-204ENST00000535399 TINAGL1Q9GZM7 467 aaPredicted RBP17.83■□□□□ 0.44
SFSWAP-204ENST00000535399 MMP27Q9H306 513 aa17.83■□□□□ 0.44
SFSWAP-204ENST00000535399 WSB1Q9Y6I7 421 aa17.83■□□□□ 0.44
SFSWAP-204ENST00000535399 A0A1W2PRX2 142 aa17.82■□□□□ 0.44
SFSWAP-204ENST00000535399 G3V318 75 aa17.82■□□□□ 0.44
SFSWAP-204ENST00000535399 TBPP20226 339 aa17.82■□□□□ 0.44
SFSWAP-204ENST00000535399 UBE2KP61086 200 aa17.82■□□□□ 0.44
SFSWAP-204ENST00000535399 SSBP2P81877 361 aaPredicted RBP17.82■□□□□ 0.44
SFSWAP-204ENST00000535399 MRGPRG-AS1Q2M3A8 158 aa17.82■□□□□ 0.44
SFSWAP-204ENST00000535399 TEX38Q6PEX7 206 aa17.82■□□□□ 0.44
SFSWAP-204ENST00000535399 PPP1R27Q86WC6 154 aa17.82■□□□□ 0.44
SFSWAP-204ENST00000535399 TEX45Q8NA69 505 aa17.82■□□□□ 0.44
SFSWAP-204ENST00000535399 TMEM229BQ8NBD8 167 aa17.82■□□□□ 0.44
SFSWAP-204ENST00000535399 OR4S2Q8NH73 311 aa17.82■□□□□ 0.44
SFSWAP-204ENST00000535399 DPPA5A6NC42 116 aa17.81■□□□□ 0.44
SFSWAP-204ENST00000535399 IGHG4P01861 327 aa17.81■□□□□ 0.44
SFSWAP-204ENST00000535399 CD74P04233 296 aa17.81■□□□□ 0.44
SFSWAP-204ENST00000535399 PPIFP30405 207 aaKnown RBP17.81■□□□□ 0.44
SFSWAP-204ENST00000535399 SSBP1Q04837 148 aaKnown RBP17.81■□□□□ 0.44
SFSWAP-204ENST00000535399 PJVKQ0ZLH3 352 aa17.81■□□□□ 0.44
SFSWAP-204ENST00000535399 FOXE3Q13461 319 aa17.81■□□□□ 0.44
SFSWAP-204ENST00000535399 VMA21Q3ZAQ7 101 aa17.81■□□□□ 0.44
SFSWAP-204ENST00000535399 C19orf54Q5BKX5 351 aa17.81■□□□□ 0.44
SFSWAP-204ENST00000535399 RNASE10Q5GAN6 216 aaKnown RBP17.81■□□□□ 0.44
SFSWAP-204ENST00000535399 RNF152Q8N8N0 203 aa17.81■□□□□ 0.44
SFSWAP-204ENST00000535399 FAM110DQ8TAY7 271 aaPredicted RBP17.81■□□□□ 0.44
SFSWAP-204ENST00000535399 BORCS5Q969J3 196 aa17.81■□□□□ 0.44
SFSWAP-204ENST00000535399 DGCR14Q96DF8 476 aaKnown RBP17.81■□□□□ 0.44
SFSWAP-204ENST00000535399 NDUFA13Q9P0J0 144 aa17.81■□□□□ 0.44
SFSWAP-204ENST00000535399 PLXNB1O43157 2135 aa17.81■□□□□ 0.44
SFSWAP-204ENST00000535399 TRAV41A0A0B4J266 112 aa17.8■□□□□ 0.44
SFSWAP-204ENST00000535399 FABP12A6NFH5 140 aa17.8■□□□□ 0.44
SFSWAP-204ENST00000535399 ARPC1BO15143 372 aaKnown RBP17.8■□□□□ 0.44
SFSWAP-204ENST00000535399 GSTZ1O43708 216 aaPredicted RBP17.8■□□□□ 0.44
SFSWAP-204ENST00000535399 KIR2DS2P43631 304 aa17.8■□□□□ 0.44
SFSWAP-204ENST00000535399 AADACL3Q5VUY0 350 aa17.8■□□□□ 0.44
SFSWAP-204ENST00000535399 FOXB2Q5VYV0 432 aa17.8■□□□□ 0.44
SFSWAP-204ENST00000535399 OR4D10Q8NGI6 311 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms