RNA–Protein interactions for RNA: ENST00000533421.2

SF3B2-213, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 407 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-213ENST00000533421 HLA-DRB1P01911 266 aa9.63□□□□□ -0.87
SF3B2-213ENST00000533421 APOA2P02652 100 aa9.63□□□□□ -0.87
SF3B2-213ENST00000533421 RPL30P62888 115 aaKnown RBP9.63□□□□□ -0.87
SF3B2-213ENST00000533421 FOXE3Q13461 319 aa9.63□□□□□ -0.87
SF3B2-213ENST00000533421 PLGLAQ15195 96 aa9.63□□□□□ -0.87
SF3B2-213ENST00000533421 CNPY1Q3B7I2 92 aa9.63□□□□□ -0.87
SF3B2-213ENST00000533421 BEAN1Q3B7T3 259 aa9.63□□□□□ -0.87
SF3B2-213ENST00000533421 TCTEX1D4Q5JR98 221 aa9.63□□□□□ -0.87
SF3B2-213ENST00000533421 KPRPQ5T749 579 aaPredicted RBP9.63□□□□□ -0.87
SF3B2-213ENST00000533421 BVESQ8NE79 360 aa9.63□□□□□ -0.87
SF3B2-213ENST00000533421 WFDC9Q8NEX5 89 aa9.63□□□□□ -0.87
SF3B2-213ENST00000533421 OR6Q1Q8NGQ2 317 aa9.63□□□□□ -0.87
SF3B2-213ENST00000533421 SOSTQ9BQB4 213 aa9.63□□□□□ -0.87
SF3B2-213ENST00000533421 SLC5A7Q9GZV3 580 aa9.63□□□□□ -0.87
SF3B2-213ENST00000533421 PLSCR3Q9NRY6 295 aa9.63□□□□□ -0.87
SF3B2-213ENST00000533421 TAS2R8Q9NYW2 309 aa9.63□□□□□ -0.87
SF3B2-213ENST00000533421 ZMAT5Q9UDW3 170 aaKnown RBP9.63□□□□□ -0.87
SF3B2-213ENST00000533421 MTFP1Q9UDX5 166 aa9.63□□□□□ -0.87
SF3B2-213ENST00000533421 WASHC3Q9Y3C0 194 aa9.63□□□□□ -0.87
SF3B2-213ENST00000533421 LINC01548A6NM66 108 aa9.62□□□□□ -0.87
SF3B2-213ENST00000533421 GABARAPH6UMI1 98 aa9.62□□□□□ -0.87
SF3B2-213ENST00000533421 SULT1C2O00338 296 aa9.62□□□□□ -0.87
SF3B2-213ENST00000533421 IGKV1-16P04430 117 aa9.62□□□□□ -0.87
SF3B2-213ENST00000533421 IGF1P05019 195 aa9.62□□□□□ -0.87
SF3B2-213ENST00000533421 S100A5P33763 92 aa9.62□□□□□ -0.87
SF3B2-213ENST00000533421 TAS2R46P59540 309 aa9.62□□□□□ -0.87
SF3B2-213ENST00000533421 HERV-K104P61576 105 aa9.62□□□□□ -0.87
SF3B2-213ENST00000533421 TAGLNQ01995 201 aaKnown RBP9.62□□□□□ -0.87
SF3B2-213ENST00000533421 DYRK1AQ13627 763 aa9.62□□□□□ -0.87
SF3B2-213ENST00000533421 ZNF79Q15937 498 aa9.62□□□□□ -0.87
SF3B2-213ENST00000533421 PYDC2Q56P42 97 aa9.62□□□□□ -0.87
SF3B2-213ENST00000533421 ZNF660Q6AZW8 331 aaPredicted RBP9.62□□□□□ -0.87
SF3B2-213ENST00000533421 LIN54Q6MZP7 749 aa9.62□□□□□ -0.87
SF3B2-213ENST00000533421 TMEM65Q6PI78 240 aa9.62□□□□□ -0.87
SF3B2-213ENST00000533421 OVCH2Q7RTZ1 564 aa9.62□□□□□ -0.87
SF3B2-213ENST00000533421 ZNF695Q8IW36 515 aa9.62□□□□□ -0.87
SF3B2-213ENST00000533421 ZNF645Q8N7E2 425 aa9.62□□□□□ -0.87
SF3B2-213ENST00000533421 KLHL30-AS1Q8NEE0 82 aa9.62□□□□□ -0.87
SF3B2-213ENST00000533421 NPBQ8NG41 125 aa9.62□□□□□ -0.87
SF3B2-213ENST00000533421 SMIM4Q8WVI0 70 aa9.62□□□□□ -0.87
SF3B2-213ENST00000533421 LINC00527Q9UJ94 153 aa9.62□□□□□ -0.87
SF3B2-213ENST00000533421 PRKDCP78527 4128 aaKnown RBP9.62□□□□□ -0.87
SF3B2-213ENST00000533421 NDUFA3O95167 84 aa9.61□□□□□ -0.87
SF3B2-213ENST00000533421 DUTP33316 252 aaKnown RBP9.61□□□□□ -0.87
SF3B2-213ENST00000533421 MYCNOSP40205 109 aa9.61□□□□□ -0.87
SF3B2-213ENST00000533421 TSPAN5P62079 268 aa9.61□□□□□ -0.87
SF3B2-213ENST00000533421 TMEM267Q0VDI3 215 aaPredicted RBP9.61□□□□□ -0.87
SF3B2-213ENST00000533421 C5orf64Q2M2E5 130 aa9.61□□□□□ -0.87
SF3B2-213ENST00000533421 C10orf99Q6UWK7 81 aa9.61□□□□□ -0.87
SF3B2-213ENST00000533421 ZNF818PQ6ZRF7 136 aa9.61□□□□□ -0.87
SF3B2-213ENST00000533421 CCDC190Q86UF4 302 aa9.61□□□□□ -0.87
SF3B2-213ENST00000533421 TCTEX1D1Q8N7M0 179 aa9.61□□□□□ -0.87
SF3B2-213ENST00000533421 OR5AN1Q8NGI8 311 aa9.61□□□□□ -0.87
SF3B2-213ENST00000533421 CLCC1Q96S66 551 aa9.61□□□□□ -0.87
SF3B2-213ENST00000533421 TSNAXQ99598 290 aaKnown RBP9.61□□□□□ -0.87
SF3B2-213ENST00000533421 OR51J1Q9H342 316 aa9.61□□□□□ -0.87
SF3B2-213ENST00000533421 TPSG1Q9NRR2 321 aa9.61□□□□□ -0.87
SF3B2-213ENST00000533421 SLC35D1Q9NTN3 355 aa9.61□□□□□ -0.87
SF3B2-213ENST00000533421 RBMX2Q9Y388 322 aaKnown RBP9.61□□□□□ -0.87
SF3B2-213ENST00000533421 RRHO14718 337 aa9.6□□□□□ -0.87
SF3B2-213ENST00000533421 CTDSPLO15194 276 aa9.6□□□□□ -0.87
SF3B2-213ENST00000533421 SPDEFO95238 335 aa9.6□□□□□ -0.87
SF3B2-213ENST00000533421 IGHG4P01861 327 aa9.6□□□□□ -0.87
SF3B2-213ENST00000533421 CD40LGP29965 261 aa9.6□□□□□ -0.87
SF3B2-213ENST00000533421 CDX1P47902 265 aaPredicted RBP9.6□□□□□ -0.87
SF3B2-213ENST00000533421 THBS3P49746 956 aa9.6□□□□□ -0.87
SF3B2-213ENST00000533421 PPP5CP53041 499 aa9.6□□□□□ -0.87
SF3B2-213ENST00000533421 OXLD1Q5BKU9 147 aa9.6□□□□□ -0.87
SF3B2-213ENST00000533421 RNASE10Q5GAN6 216 aaKnown RBP9.6□□□□□ -0.87
SF3B2-213ENST00000533421 STEAP1BQ6NZ63 245 aa9.6□□□□□ -0.87
SF3B2-213ENST00000533421 KCTD9Q7L273 389 aa9.6□□□□□ -0.87
SF3B2-213ENST00000533421 PDPNQ86YL7 162 aa9.6□□□□□ -0.87
SF3B2-213ENST00000533421 TMEM229BQ8NBD8 167 aa9.6□□□□□ -0.87
SF3B2-213ENST00000533421 TCTEX1D2Q8WW35 142 aa9.6□□□□□ -0.87
SF3B2-213ENST00000533421 GIMAP1Q8WWP7 306 aa9.6□□□□□ -0.87
SF3B2-213ENST00000533421 MOB3AQ96BX8 217 aa9.6□□□□□ -0.87
SF3B2-213ENST00000533421 HSPB9Q9BQS6 159 aa9.6□□□□□ -0.87
SF3B2-213ENST00000533421 FBXL15Q9H469 300 aa9.6□□□□□ -0.87
SF3B2-213ENST00000533421 PARP11Q9NR21 331 aa9.6□□□□□ -0.87
SF3B2-213ENST00000533421 CMYA5Q8N3K9 4069 aa9.6□□□□□ -0.87
SF3B2-213ENST00000533421 GSTZ1O43708 216 aaPredicted RBP9.59□□□□□ -0.87
SF3B2-213ENST00000533421 FCGR3BO75015 233 aa9.59□□□□□ -0.87
SF3B2-213ENST00000533421 RAB3DO95716 219 aa9.59□□□□□ -0.87
SF3B2-213ENST00000533421 CRYZL1O95825 349 aa9.59□□□□□ -0.87
SF3B2-213ENST00000533421 RRASP10301 218 aa9.59□□□□□ -0.87
SF3B2-213ENST00000533421 PI3P19957 117 aa9.59□□□□□ -0.87
SF3B2-213ENST00000533421 RPS16P62249 146 aaKnown RBP9.59□□□□□ -0.87
SF3B2-213ENST00000533421 EIF4EBP1Q13541 118 aaPredicted RBP9.59□□□□□ -0.87
SF3B2-213ENST00000533421 SCGB2B2Q4G0G5 96 aa9.59□□□□□ -0.87
SF3B2-213ENST00000533421 PHLDA2Q53GA4 152 aa9.59□□□□□ -0.87
SF3B2-213ENST00000533421 DHRS11Q6UWP2 260 aa9.59□□□□□ -0.87
SF3B2-213ENST00000533421 RNF152Q8N8N0 203 aa9.59□□□□□ -0.87
SF3B2-213ENST00000533421 OR4C16Q8NGL9 310 aa9.59□□□□□ -0.87
SF3B2-213ENST00000533421 OR6F1Q8NGZ6 308 aa9.59□□□□□ -0.87
SF3B2-213ENST00000533421 OR51H1Q8NH63 302 aa9.59□□□□□ -0.87
SF3B2-213ENST00000533421 DDB2Q92466 427 aa9.59□□□□□ -0.87
SF3B2-213ENST00000533421 ADTRPQ96IZ2 230 aa9.59□□□□□ -0.87
SF3B2-213ENST00000533421 THAP7Q9BT49 309 aaPredicted RBP9.59□□□□□ -0.87
SF3B2-213ENST00000533421 GAB2Q9UQC2 676 aa9.59□□□□□ -0.87
SF3B2-213ENST00000533421 A3GALT2U3KPV4 340 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms