RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 HAPLN4Q86UW8 402 aa12.9□□□□□ -0.34
CPSF1-207ENST00000531727 CNBD2Q96M20 576 aa12.9□□□□□ -0.34
CPSF1-207ENST00000531727 GINS4Q9BRT9 223 aa12.9□□□□□ -0.34
CPSF1-207ENST00000531727 BLOC1S6Q9UL45 172 aa12.9□□□□□ -0.34
CPSF1-207ENST00000531727 RBM7Q9Y580 266 aaKnown RBP12.9□□□□□ -0.34
CPSF1-207ENST00000531727 TRDV1A0A1B0GX56 115 aa12.89□□□□□ -0.35
CPSF1-207ENST00000531727 ANKRD34BA5PLL1 514 aa12.89□□□□□ -0.35
CPSF1-207ENST00000531727 METTL21EPA6NDL7 271 aa12.89□□□□□ -0.35
CPSF1-207ENST00000531727 SRRM4A7MD48 611 aaKnown RBP12.89□□□□□ -0.35
CPSF1-207ENST00000531727 ARFRP1Q13795 201 aa12.89□□□□□ -0.35
CPSF1-207ENST00000531727 IZUMO2Q6UXV1 221 aa12.89□□□□□ -0.35
CPSF1-207ENST00000531727 Q6ZS49 121 aa12.89□□□□□ -0.35
CPSF1-207ENST00000531727 ANKRD13BQ86YJ7 626 aa12.89□□□□□ -0.35
CPSF1-207ENST00000531727 ADTRPQ96IZ2 230 aa12.89□□□□□ -0.35
CPSF1-207ENST00000531727 CENPOQ9BU64 300 aa12.89□□□□□ -0.35
CPSF1-207ENST00000531727 RSRP1Q9BUV0 290 aa12.89□□□□□ -0.35
CPSF1-207ENST00000531727 A0A0B4J203 849 aa12.88□□□□□ -0.35
CPSF1-207ENST00000531727 GALP22466 123 aa12.88□□□□□ -0.35
CPSF1-207ENST00000531727 AADACP22760 399 aa12.88□□□□□ -0.35
CPSF1-207ENST00000531727 DUTP33316 252 aaKnown RBP12.88□□□□□ -0.35
CPSF1-207ENST00000531727 TALDO1P37837 337 aa12.88□□□□□ -0.35
CPSF1-207ENST00000531727 KLF5Q13887 457 aaPredicted RBP12.88□□□□□ -0.35
CPSF1-207ENST00000531727 MRGPRG-AS1Q2M3A8 158 aa12.88□□□□□ -0.35
CPSF1-207ENST00000531727 H1FOOQ8IZA3 346 aaPredicted RBP12.88□□□□□ -0.35
CPSF1-207ENST00000531727 DDB2Q92466 427 aa12.88□□□□□ -0.35
CPSF1-207ENST00000531727 TINAGL1Q9GZM7 467 aaPredicted RBP12.88□□□□□ -0.35
CPSF1-207ENST00000531727 ZMAT4Q9H898 229 aa12.88□□□□□ -0.35
CPSF1-207ENST00000531727 IGKV1D-8A0A087WSZ0 117 aa12.87□□□□□ -0.35
CPSF1-207ENST00000531727 DTYMKP23919 212 aa12.87□□□□□ -0.35
CPSF1-207ENST00000531727 UBE2KP61086 200 aa12.87□□□□□ -0.35
CPSF1-207ENST00000531727 DEFA5Q01523 94 aa12.87□□□□□ -0.35
CPSF1-207ENST00000531727 ARL6IP1Q15041 203 aa12.87□□□□□ -0.35
CPSF1-207ENST00000531727 VMA21Q3ZAQ7 101 aa12.87□□□□□ -0.35
CPSF1-207ENST00000531727 C22orf42Q6IC83 251 aa12.87□□□□□ -0.35
CPSF1-207ENST00000531727 ZNF343Q6P1L6 599 aa12.87□□□□□ -0.35
CPSF1-207ENST00000531727 NR2C2APQ86WQ0 139 aa12.87□□□□□ -0.35
CPSF1-207ENST00000531727 Q8N1Y9 231 aa12.87□□□□□ -0.35
CPSF1-207ENST00000531727 TEX45Q8NA69 505 aa12.87□□□□□ -0.35
CPSF1-207ENST00000531727 MUC7Q8TAX7 377 aa12.87□□□□□ -0.35
CPSF1-207ENST00000531727 ATG5Q9H1Y0 275 aa12.87□□□□□ -0.35
CPSF1-207ENST00000531727 COA4Q9NYJ1 87 aa12.87□□□□□ -0.35
CPSF1-207ENST00000531727 MSGN1A6NI15 193 aa12.86□□□□□ -0.35
CPSF1-207ENST00000531727 LINC00473A8K010 186 aa12.86□□□□□ -0.35
CPSF1-207ENST00000531727 CRYZL1O95825 349 aa12.86□□□□□ -0.35
CPSF1-207ENST00000531727 DYRK1AQ13627 763 aa12.86□□□□□ -0.35
CPSF1-207ENST00000531727 TNXAQ16473 311 aa12.86□□□□□ -0.35
CPSF1-207ENST00000531727 PRSS8Q16651 343 aa12.86□□□□□ -0.35
CPSF1-207ENST00000531727 OR9G4Q8NGQ1 327 aa12.86□□□□□ -0.35
CPSF1-207ENST00000531727 USMG5Q96IX5 58 aa12.86□□□□□ -0.35
CPSF1-207ENST00000531727 PHB2Q99623 299 aa12.86□□□□□ -0.35
CPSF1-207ENST00000531727 PEF1Q9UBV8 284 aaKnown RBP12.86□□□□□ -0.35
CPSF1-207ENST00000531727 ELF5Q9UKW6 265 aaPredicted RBP12.86□□□□□ -0.35
CPSF1-207ENST00000531727 STAB2Q8WWQ8 2551 aa12.86□□□□□ -0.35
CPSF1-207ENST00000531727 APELAP0DMC3 54 aa12.85□□□□□ -0.35
CPSF1-207ENST00000531727 IGHV4-30-4P0DP06 118 aa12.85□□□□□ -0.35
CPSF1-207ENST00000531727 SYNJ2BPP57105 145 aa12.85□□□□□ -0.35
CPSF1-207ENST00000531727 GABARAPL2P60520 117 aa12.85□□□□□ -0.35
CPSF1-207ENST00000531727 CDNFQ49AH0 187 aa12.85□□□□□ -0.35
CPSF1-207ENST00000531727 IL34Q6ZMJ4 242 aa12.85□□□□□ -0.35
CPSF1-207ENST00000531727 IDO2Q6ZQW0 420 aa12.85□□□□□ -0.35
CPSF1-207ENST00000531727 ADAD2Q8NCV1 583 aaKnown RBP12.85□□□□□ -0.35
CPSF1-207ENST00000531727 OSR1Q8TAX0 266 aaPredicted RBP12.85□□□□□ -0.35
CPSF1-207ENST00000531727 TM2D3Q9BRN9 247 aa12.85□□□□□ -0.35
CPSF1-207ENST00000531727 RAB26Q9ULW5 256 aa12.85□□□□□ -0.35
CPSF1-207ENST00000531727 SMIM30A4D0T7 59 aa12.84□□□□□ -0.35
CPSF1-207ENST00000531727 A8MZ25 164 aa12.84□□□□□ -0.35
CPSF1-207ENST00000531727 MRPS14O60783 128 aaKnown RBP12.84□□□□□ -0.35
CPSF1-207ENST00000531727 TRBV12-3P01733 135 aa12.84□□□□□ -0.35
CPSF1-207ENST00000531727 OR9G9P0C7N8 305 aa12.84□□□□□ -0.35
CPSF1-207ENST00000531727 CASC10Q5T4H9 136 aa12.84□□□□□ -0.35
CPSF1-207ENST00000531727 SGPP2Q8IWX5 399 aa12.84□□□□□ -0.35
CPSF1-207ENST00000531727 ZNF645Q8N7E2 425 aa12.84□□□□□ -0.35
CPSF1-207ENST00000531727 SRSF12Q8WXF0 261 aaKnown RBP12.84□□□□□ -0.35
CPSF1-207ENST00000531727 ACOT12Q8WYK0 555 aa12.84□□□□□ -0.35
CPSF1-207ENST00000531727 C19orf73Q9NVV2 129 aa12.84□□□□□ -0.35
CPSF1-207ENST00000531727 ADAM30Q9UKF2 790 aa12.84□□□□□ -0.35
CPSF1-207ENST00000531727 H0Y980 276 aa12.83□□□□□ -0.36
CPSF1-207ENST00000531727 MPPED1O15442 326 aa12.83□□□□□ -0.36
CPSF1-207ENST00000531727 RBMXL2O75526 392 aaKnown RBP12.83□□□□□ -0.36
CPSF1-207ENST00000531727 CTXN2P0C2S0 81 aa12.83□□□□□ -0.36
CPSF1-207ENST00000531727 FGF9P31371 208 aaPredicted RBP12.83□□□□□ -0.36
CPSF1-207ENST00000531727 CDK10Q15131 360 aa12.83□□□□□ -0.36
CPSF1-207ENST00000531727 TATDN3Q17R31 274 aa12.83□□□□□ -0.36
CPSF1-207ENST00000531727 UBE2UQ5VVX9 321 aa12.83□□□□□ -0.36
CPSF1-207ENST00000531727 HACD4Q5VWC8 232 aa12.83□□□□□ -0.36
CPSF1-207ENST00000531727 ST6GALNAC5Q9BVH7 336 aa12.83□□□□□ -0.36
CPSF1-207ENST00000531727 SIGLEC8Q9NYZ4 499 aa12.83□□□□□ -0.36
CPSF1-207ENST00000531727 OR2W1Q9Y3N9 320 aa12.83□□□□□ -0.36
CPSF1-207ENST00000531727 NOTOA8MTQ0 251 aa12.82□□□□□ -0.36
CPSF1-207ENST00000531727 J3QRK9 145 aa12.82□□□□□ -0.36
CPSF1-207ENST00000531727 CREBL2O60519 120 aaPredicted RBP12.82□□□□□ -0.36
CPSF1-207ENST00000531727 HLA-DQB1P01920 261 aa12.82□□□□□ -0.36
CPSF1-207ENST00000531727 SAA1P0DJI8 122 aaPredicted RBP12.82□□□□□ -0.36
CPSF1-207ENST00000531727 RPEL1Q2QD12 228 aa12.82□□□□□ -0.36
CPSF1-207ENST00000531727 KCTD9Q7L273 389 aa12.82□□□□□ -0.36
CPSF1-207ENST00000531727 SNAPC3Q92966 411 aa12.82□□□□□ -0.36
CPSF1-207ENST00000531727 DCSTAMPQ9H295 470 aa12.82□□□□□ -0.36
CPSF1-207ENST00000531727 ZNF430Q9H8G1 570 aaPredicted RBP12.82□□□□□ -0.36
CPSF1-207ENST00000531727 TXNL4BQ9NX01 149 aaKnown RBP12.82□□□□□ -0.36
CPSF1-207ENST00000531727 FAM223BA6NKX1 122 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms