RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 VPS25Q9BRG1 176 aa2.82□□□□□ -1.96
SKP1-209ENST00000522552 COMMD5Q9GZQ3 224 aa2.82□□□□□ -1.96
SKP1-209ENST00000522552 PDFQ9HBH1 243 aa2.82□□□□□ -1.96
SKP1-209ENST00000522552 KCNIP2Q9NS61 270 aa2.82□□□□□ -1.96
SKP1-209ENST00000522552 MED11Q9P086 117 aa2.82□□□□□ -1.96
SKP1-209ENST00000522552 LRP4O75096 1905 aa2.82□□□□□ -1.96
SKP1-209ENST00000522552 A8MUN3 132 aa2.82□□□□□ -1.96
SKP1-209ENST00000522552 H0YJW9 148 aa2.82□□□□□ -1.96
SKP1-209ENST00000522552 LST1O00453 97 aa2.82□□□□□ -1.96
SKP1-209ENST00000522552 RGS5O15539 181 aa2.82□□□□□ -1.96
SKP1-209ENST00000522552 GSTZ1O43708 216 aaPredicted RBP2.82□□□□□ -1.96
SKP1-209ENST00000522552 GADD45GO95257 159 aa2.82□□□□□ -1.96
SKP1-209ENST00000522552 CXorf1O96002 111 aa2.82□□□□□ -1.96
SKP1-209ENST00000522552 C1QCP02747 245 aa2.82□□□□□ -1.96
SKP1-209ENST00000522552 MAS1P04201 325 aa2.82□□□□□ -1.96
SKP1-209ENST00000522552 GYPCP04921 128 aa2.82□□□□□ -1.96
SKP1-209ENST00000522552 RPL7P18124 248 aaKnown RBP2.82□□□□□ -1.96
SKP1-209ENST00000522552 BLVRBP30043 206 aaPredicted RBP2.82□□□□□ -1.96
SKP1-209ENST00000522552 SDC4P31431 198 aa2.82□□□□□ -1.96
SKP1-209ENST00000522552 G6PCP35575 357 aa2.82□□□□□ -1.96
SKP1-209ENST00000522552 ATP5G3P48201 142 aa2.82□□□□□ -1.96
SKP1-209ENST00000522552 ZNF140P52738 457 aaPredicted RBP2.82□□□□□ -1.96
SKP1-209ENST00000522552 RPS28P62857 69 aaKnown RBP2.82□□□□□ -1.96
SKP1-209ENST00000522552 GNA12Q03113 381 aa2.82□□□□□ -1.96
SKP1-209ENST00000522552 RNASE13Q5GAN3 156 aaKnown RBP2.82□□□□□ -1.96
SKP1-209ENST00000522552 KRTAP5-11Q6L8G4 156 aa2.82□□□□□ -1.96
SKP1-209ENST00000522552 POM121L12Q8N7R1 296 aa2.82□□□□□ -1.96
SKP1-209ENST00000522552 OR13C8Q8NGS7 320 aa2.82□□□□□ -1.96
SKP1-209ENST00000522552 SGMS2Q8NHU3 365 aa2.82□□□□□ -1.96
SKP1-209ENST00000522552 SLC25A40Q8TBP6 338 aa2.82□□□□□ -1.96
SKP1-209ENST00000522552 ZNF721Q8TF20 911 aa2.82□□□□□ -1.96
SKP1-209ENST00000522552 C2orf15Q8WU43 125 aaKnown RBP2.82□□□□□ -1.96
SKP1-209ENST00000522552 OR5P3Q8WZ94 311 aa2.82□□□□□ -1.96
SKP1-209ENST00000522552 MALSU1Q96EH3 234 aa2.82□□□□□ -1.96
SKP1-209ENST00000522552 C1orf147Q96MC9 270 aaPredicted RBP2.82□□□□□ -1.96
SKP1-209ENST00000522552 C2orf88Q9BSF0 95 aa2.82□□□□□ -1.96
SKP1-209ENST00000522552 PBOV1Q9GZY1 135 aa2.82□□□□□ -1.96
SKP1-209ENST00000522552 TAAR3PQ9P1P4 343 aa2.82□□□□□ -1.96
SKP1-209ENST00000522552 COPZ2Q9P299 210 aa2.82□□□□□ -1.96
SKP1-209ENST00000522552 ZNF230Q9UIE0 474 aaPredicted RBP2.82□□□□□ -1.96
SKP1-209ENST00000522552 ZNF580Q9UK33 172 aa2.82□□□□□ -1.96
SKP1-209ENST00000522552 GTF3C1Q12789 2109 aa2.81□□□□□ -1.96
SKP1-209ENST00000522552 TICRRQ7Z2Z1 1910 aa2.81□□□□□ -1.96
SKP1-209ENST00000522552 PLXNB3Q9ULL4 1909 aa2.81□□□□□ -1.96
SKP1-209ENST00000522552 DSCAML1Q8TD84 2053 aa2.81□□□□□ -1.96
SKP1-209ENST00000522552 ABCC12Q96J65 1359 aa2.81□□□□□ -1.96
SKP1-209ENST00000522552 IGLV11-55A0A075B6I3 123 aa2.81□□□□□ -1.96
SKP1-209ENST00000522552 TRAV4A0A0B4J268 109 aa2.81□□□□□ -1.96
SKP1-209ENST00000522552 IGHV7-4-1A0A0J9YVY3 117 aa2.81□□□□□ -1.96
SKP1-209ENST00000522552 A0A1B0GVX0 72 aa2.81□□□□□ -1.96
SKP1-209ENST00000522552 NDUFAF8A1L188 74 aa2.81□□□□□ -1.96
SKP1-209ENST00000522552 RIIAD1A6NNX1 92 aa2.81□□□□□ -1.96
SKP1-209ENST00000522552 COX7A2LO14548 114 aa2.81□□□□□ -1.96
SKP1-209ENST00000522552 BET1O15155 118 aa2.81□□□□□ -1.96
SKP1-209ENST00000522552 HTR1AP08908 422 aa2.81□□□□□ -1.96
SKP1-209ENST00000522552 SMIM17P0DL12 118 aa2.81□□□□□ -1.96
SKP1-209ENST00000522552 INAFM2P0DMQ5 153 aa2.81□□□□□ -1.96
SKP1-209ENST00000522552 IGHV1-8P0DP01 117 aa2.81□□□□□ -1.96
SKP1-209ENST00000522552 SERPINB10P48595 397 aa2.81□□□□□ -1.96
SKP1-209ENST00000522552 ZNF616Q08AN1 781 aa2.81□□□□□ -1.96
SKP1-209ENST00000522552 OR8B8Q15620 311 aa2.81□□□□□ -1.96
SKP1-209ENST00000522552 GRK1Q15835 563 aa2.81□□□□□ -1.96
SKP1-209ENST00000522552 TNFAIP8L3Q5GJ75 292 aa2.81□□□□□ -1.96
SKP1-209ENST00000522552 MORN3Q6PF18 240 aaPredicted RBP2.81□□□□□ -1.96
SKP1-209ENST00000522552 TMEM86AQ8N2M4 240 aa2.81□□□□□ -1.96
SKP1-209ENST00000522552 SLC22A24Q8N4F4 322 aa2.81□□□□□ -1.96
SKP1-209ENST00000522552 ZNF283Q8N7M2 679 aa2.81□□□□□ -1.96
SKP1-209ENST00000522552 OR4A5Q8NH83 315 aa2.81□□□□□ -1.96
SKP1-209ENST00000522552 MAL2Q969L2 176 aa2.81□□□□□ -1.96
SKP1-209ENST00000522552 PDXPQ96GD0 296 aa2.81□□□□□ -1.96
SKP1-209ENST00000522552 OR2A5Q96R48 311 aa2.81□□□□□ -1.96
SKP1-209ENST00000522552 TSSK6Q9BXA6 273 aa2.81□□□□□ -1.96
SKP1-209ENST00000522552 C11orf68Q9H3H3 251 aaKnown RBP2.81□□□□□ -1.96
SKP1-209ENST00000522552 TMEM38BQ9NVV0 291 aa2.81□□□□□ -1.96
SKP1-209ENST00000522552 FBXL12Q9NXK8 326 aa2.81□□□□□ -1.96
SKP1-209ENST00000522552 MRPS16Q9Y3D3 137 aaKnown RBP2.81□□□□□ -1.96
SKP1-209ENST00000522552 ZNF106Q9H2Y7 1883 aaKnown RBP2.81□□□□□ -1.96
SKP1-209ENST00000522552 XIRP1Q702N8 1843 aaKnown RBP2.8□□□□□ -1.96
SKP1-209ENST00000522552 IGKV1-12A0A0C4DH73 117 aa2.8□□□□□ -1.96
SKP1-209ENST00000522552 A0A0J9YY10 115 aa2.8□□□□□ -1.96
SKP1-209ENST00000522552 KLF18A0A0U1RQI7 1052 aa2.8□□□□□ -1.96
SKP1-209ENST00000522552 A0A1B0GX78 115 aa2.8□□□□□ -1.96
SKP1-209ENST00000522552 C5orf58C9J3I9 102 aa2.8□□□□□ -1.96
SKP1-209ENST00000522552 ZNF432O94892 652 aa2.8□□□□□ -1.96
SKP1-209ENST00000522552 IGKV1D-12P01611 117 aa2.8□□□□□ -1.96
SKP1-209ENST00000522552 IGLV3-25P01717 112 aa2.8□□□□□ -1.96
SKP1-209ENST00000522552 APCSP02743 223 aa2.8□□□□□ -1.96
SKP1-209ENST00000522552 IGHV4-34P06331 123 aa2.8□□□□□ -1.96
SKP1-209ENST00000522552 RBP1P09455 135 aa2.8□□□□□ -1.96
SKP1-209ENST00000522552 TLX1NBP0CAT3 122 aa2.8□□□□□ -1.96
SKP1-209ENST00000522552 PPIBP23284 216 aaKnown RBP2.8□□□□□ -1.96
SKP1-209ENST00000522552 RPS3P23396 243 aaKnown RBP eCLIP2.8□□□□□ -1.962e-11■■□□□ 12.7
SKP1-209ENST00000522552 PPP1CCP36873 323 aaKnown RBP2.8□□□□□ -1.96
SKP1-209ENST00000522552 DNAJB13P59910 316 aa2.8□□□□□ -1.96
SKP1-209ENST00000522552 MMDQ15546 238 aa2.8□□□□□ -1.96
SKP1-209ENST00000522552 FAM78AQ5JUQ0 283 aa2.8□□□□□ -1.96
SKP1-209ENST00000522552 AGTRAPQ6RW13 159 aa2.8□□□□□ -1.96
SKP1-209ENST00000522552 Q6ZS49 121 aa2.8□□□□□ -1.96
SKP1-209ENST00000522552 TMEM256Q8N2U0 113 aa2.8□□□□□ -1.96
SKP1-209ENST00000522552 C15orf56Q8N910 161 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms