RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 CASTOR1Q8WTX7 329 aa13.21□□□□□ -0.29
SQLE-205ENST00000521232 ARPC1AQ92747 370 aa13.21□□□□□ -0.29
SQLE-205ENST00000521232 HARBI1Q96MB7 349 aa13.21□□□□□ -0.29
SQLE-205ENST00000521232 OR2W1Q9Y3N9 320 aa13.21□□□□□ -0.29
SQLE-205ENST00000521232 SORL1Q92673 2214 aa13.21□□□□□ -0.29
SQLE-205ENST00000521232 LINC00473A8K010 186 aa13.2□□□□□ -0.3
SQLE-205ENST00000521232 SHOXO15266 292 aa13.2□□□□□ -0.3
SQLE-205ENST00000521232 LGALS1P09382 135 aaKnown RBP13.2□□□□□ -0.3
SQLE-205ENST00000521232 CD40LGP29965 261 aa13.2□□□□□ -0.3
SQLE-205ENST00000521232 GNG2P59768 71 aa13.2□□□□□ -0.3
SQLE-205ENST00000521232 PJVKQ0ZLH3 352 aa13.2□□□□□ -0.3
SQLE-205ENST00000521232 CBX3Q13185 183 aa13.2□□□□□ -0.3
SQLE-205ENST00000521232 IDNKQ5T6J7 187 aa13.2□□□□□ -0.3
SQLE-205ENST00000521232 ZNF645Q8N7E2 425 aa13.2□□□□□ -0.3
SQLE-205ENST00000521232 SLC25A38Q96DW6 304 aa13.2□□□□□ -0.3
SQLE-205ENST00000521232 SLA2Q9H6Q3 261 aa13.2□□□□□ -0.3
SQLE-205ENST00000521232 ANXA10Q9UJ72 324 aa13.2□□□□□ -0.3
SQLE-205ENST00000521232 A0A0A6YYH2 397 aa13.19□□□□□ -0.3
SQLE-205ENST00000521232 A6NJ64 397 aa13.19□□□□□ -0.3
SQLE-205ENST00000521232 SLC22A5O76082 557 aa13.19□□□□□ -0.3
SQLE-205ENST00000521232 CNIH1O95406 144 aa13.19□□□□□ -0.3
SQLE-205ENST00000521232 NFYAP23511 347 aaPredicted RBP13.19□□□□□ -0.3
SQLE-205ENST00000521232 INSL3P51460 131 aa13.19□□□□□ -0.3
SQLE-205ENST00000521232 MRGPRG-AS1Q2M3A8 158 aa13.19□□□□□ -0.3
SQLE-205ENST00000521232 RHOVQ96L33 236 aa13.19□□□□□ -0.3
SQLE-205ENST00000521232 TMEM68Q96MH6 324 aa13.19□□□□□ -0.3
SQLE-205ENST00000521232 MS4A10Q96PG2 267 aa13.19□□□□□ -0.3
SQLE-205ENST00000521232 ALX4Q9H161 411 aaPredicted RBP13.19□□□□□ -0.3
SQLE-205ENST00000521232 TRAV18A0A075B6X5 111 aa13.18□□□□□ -0.3
SQLE-205ENST00000521232 LINC01619G3V211 115 aa13.18□□□□□ -0.3
SQLE-205ENST00000521232 J3QRK9 145 aa13.18□□□□□ -0.3
SQLE-205ENST00000521232 IGLV2-14P01704 120 aa13.18□□□□□ -0.3
SQLE-205ENST00000521232 UBE2KP61086 200 aa13.18□□□□□ -0.3
SQLE-205ENST00000521232 DCTN2Q13561 401 aaKnown RBP13.18□□□□□ -0.3
SQLE-205ENST00000521232 TIMM50Q3ZCQ8 353 aa13.18□□□□□ -0.3
SQLE-205ENST00000521232 TEX45Q8NA69 505 aa13.18□□□□□ -0.3
SQLE-205ENST00000521232 GRPEL2Q8TAA5 225 aa13.18□□□□□ -0.3
SQLE-205ENST00000521232 OSR1Q8TAX0 266 aaPredicted RBP13.18□□□□□ -0.3
SQLE-205ENST00000521232 DCUN1D4Q92564 292 aa13.18□□□□□ -0.3
SQLE-205ENST00000521232 SPATA2Q9UM82 520 aa13.18□□□□□ -0.3
SQLE-205ENST00000521232 A0A087WXM4 84 aa13.17□□□□□ -0.3
SQLE-205ENST00000521232 H3BUA1 57 aa13.17□□□□□ -0.3
SQLE-205ENST00000521232 TUSC2O75896 110 aa13.17□□□□□ -0.3
SQLE-205ENST00000521232 BRI3O95415 125 aa13.17□□□□□ -0.3
SQLE-205ENST00000521232 CRYZL1O95825 349 aa13.17□□□□□ -0.3
SQLE-205ENST00000521232 HSPB1P04792 205 aaKnown RBP13.17□□□□□ -0.3
SQLE-205ENST00000521232 TPPP2P59282 170 aa13.17□□□□□ -0.3
SQLE-205ENST00000521232 VMA21Q3ZAQ7 101 aa13.17□□□□□ -0.3
SQLE-205ENST00000521232 CROCCP3Q8IVE0 287 aa13.17□□□□□ -0.3
SQLE-205ENST00000521232 TSPAN14Q8NG11 270 aa13.17□□□□□ -0.3
SQLE-205ENST00000521232 OR5T1Q8NG75 326 aa13.17□□□□□ -0.3
SQLE-205ENST00000521232 DLX4Q92988 240 aaPredicted RBP13.17□□□□□ -0.3
SQLE-205ENST00000521232 YIPF6Q96EC8 236 aa13.17□□□□□ -0.3
SQLE-205ENST00000521232 DIABLOQ9NR28 239 aa13.17□□□□□ -0.3
SQLE-205ENST00000521232 RBMX2Q9Y388 322 aaKnown RBP13.17□□□□□ -0.3
SQLE-205ENST00000521232 IGHV4OR15-8A0A075B7B6 117 aa13.16□□□□□ -0.3
SQLE-205ENST00000521232 A0A087WW49 117 aa13.16□□□□□ -0.3
SQLE-205ENST00000521232 IGKV1D-13A0A0B4J2D9 117 aa13.16□□□□□ -0.3
SQLE-205ENST00000521232 OVOL1O14753 267 aa13.16□□□□□ -0.3
SQLE-205ENST00000521232 TNFAIP8O95379 198 aa13.16□□□□□ -0.3
SQLE-205ENST00000521232 IGHV3-11P01762 117 aa13.16□□□□□ -0.3
SQLE-205ENST00000521232 TRGV3P03979 118 aa13.16□□□□□ -0.3
SQLE-205ENST00000521232 IGKV1-13P0DP09 117 aa13.16□□□□□ -0.3
SQLE-205ENST00000521232 ZNF429Q86V71 674 aa13.16□□□□□ -0.3
SQLE-205ENST00000521232 HOGA1Q86XE5 327 aa13.16□□□□□ -0.3
SQLE-205ENST00000521232 POC5Q8NA72 575 aa13.16□□□□□ -0.3
SQLE-205ENST00000521232 B9D2Q9BPU9 175 aa13.16□□□□□ -0.3
SQLE-205ENST00000521232 AUNIPQ9H7T9 357 aa13.16□□□□□ -0.3
SQLE-205ENST00000521232 LSM4Q9Y4Z0 139 aaKnown RBP13.16□□□□□ -0.3
SQLE-205ENST00000521232 AIREO43918 545 aa13.15□□□□□ -0.3
SQLE-205ENST00000521232 TGFBR1P36897 503 aa13.15□□□□□ -0.3
SQLE-205ENST00000521232 RPS19P39019 145 aaKnown RBP13.15□□□□□ -0.3
SQLE-205ENST00000521232 ECI1P42126 302 aa13.15□□□□□ -0.3
SQLE-205ENST00000521232 SLURP1P55000 103 aa13.15□□□□□ -0.3
SQLE-205ENST00000521232 RPL30P62888 115 aaKnown RBP13.15□□□□□ -0.3
SQLE-205ENST00000521232 EIF4EBP1Q13541 118 aaPredicted RBP13.15□□□□□ -0.3
SQLE-205ENST00000521232 PRSS8Q16651 343 aa13.15□□□□□ -0.3
SQLE-205ENST00000521232 OVCH2Q7RTZ1 564 aa13.15□□□□□ -0.3
SQLE-205ENST00000521232 GVQW1Q8N7I0 195 aa13.15□□□□□ -0.3
SQLE-205ENST00000521232 BEST4Q8NFU0 473 aa13.15□□□□□ -0.3
SQLE-205ENST00000521232 VCX3AQ9NNX9 186 aa13.15□□□□□ -0.3
SQLE-205ENST00000521232 ZNF355PQ9NSJ1 428 aa13.15□□□□□ -0.3
SQLE-205ENST00000521232 PRELID3BQ9Y3B1 194 aa13.15□□□□□ -0.3
SQLE-205ENST00000521232 A0A0G2JLM5 398 aa13.14□□□□□ -0.31
SQLE-205ENST00000521232 MSGN1A6NI15 193 aa13.14□□□□□ -0.31
SQLE-205ENST00000521232 FCGR3BO75015 233 aa13.14□□□□□ -0.31
SQLE-205ENST00000521232 KCTD9Q7L273 389 aa13.14□□□□□ -0.31
SQLE-205ENST00000521232 PRR25Q96S07 402 aa13.14□□□□□ -0.31
SQLE-205ENST00000521232 HSD17B10Q99714 261 aaKnown RBP13.14□□□□□ -0.31
SQLE-205ENST00000521232 TRIM64CA6NLI5 447 aa13.13□□□□□ -0.31
SQLE-205ENST00000521232 XRCC3O43542 346 aa13.13□□□□□ -0.31
SQLE-205ENST00000521232 AADACP22760 399 aa13.13□□□□□ -0.31
SQLE-205ENST00000521232 ARPC4P59998 168 aa13.13□□□□□ -0.31
SQLE-205ENST00000521232 CD69Q07108 199 aa13.13□□□□□ -0.31
SQLE-205ENST00000521232 CDK10Q15131 360 aa13.13□□□□□ -0.31
SQLE-205ENST00000521232 ACSM6Q6P461 480 aa13.13□□□□□ -0.31
SQLE-205ENST00000521232 IDO2Q6ZQW0 420 aa13.13□□□□□ -0.31
SQLE-205ENST00000521232 MFSD4AQ8N468 514 aa13.13□□□□□ -0.31
SQLE-205ENST00000521232 S100A16Q96FQ6 103 aaKnown RBP13.13□□□□□ -0.31
SQLE-205ENST00000521232 DCUN1D5Q9BTE7 237 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms