RNA–Protein interactions for RNA: ENST00000503078.5

DDX41-202, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 2,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-202ENST00000503078 USF3Q68DE3 2245 aa20.47■□□□□ 0.87
DDX41-202ENST00000503078 TMEM210A6NLX4 147 aa20.47■□□□□ 0.87
DDX41-202ENST00000503078 GALR2O43603 387 aaPredicted RBP20.47■□□□□ 0.87
DDX41-202ENST00000503078 RPL15P61313 204 aaKnown RBP20.47■□□□□ 0.87
DDX41-202ENST00000503078 TMEM105Q8N8V8 129 aa20.47■□□□□ 0.87
DDX41-202ENST00000503078 SLC25A40Q8TBP6 338 aa20.47■□□□□ 0.87
DDX41-202ENST00000503078 TMEM249Q2WGJ8 235 aa20.46■□□□□ 0.87
DDX41-202ENST00000503078 TMEM144Q7Z5S9 345 aa20.46■□□□□ 0.87
DDX41-202ENST00000503078 RAB1CQ92928 201 aa20.46■□□□□ 0.87
DDX41-202ENST00000503078 SPRY4Q9C004 299 aa20.46■□□□□ 0.87
DDX41-202ENST00000503078 WDR83OSQ9Y284 106 aa20.46■□□□□ 0.87
DDX41-202ENST00000503078 TECTAO75443 2155 aa20.46■□□□□ 0.87
DDX41-202ENST00000503078 C15orf62A8K5M9 175 aa20.46■□□□□ 0.87
DDX41-202ENST00000503078 IQCF6A8MYZ5 107 aa20.46■□□□□ 0.87
DDX41-202ENST00000503078 EGR1P18146 543 aa20.46■□□□□ 0.87
DDX41-202ENST00000503078 ATP5G3P48201 142 aa20.46■□□□□ 0.87
DDX41-202ENST00000503078 PAX5Q02548 391 aa20.46■□□□□ 0.87
DDX41-202ENST00000503078 IMMP2LQ96T52 175 aa20.46■□□□□ 0.87
DDX41-202ENST00000503078 KCNIP2Q9NS61 270 aa20.46■□□□□ 0.87
DDX41-202ENST00000503078 TRAPPC1Q9Y5R8 145 aa20.46■□□□□ 0.87
DDX41-202ENST00000503078 A0A0U1RQK1 487 aa20.45■□□□□ 0.86
DDX41-202ENST00000503078 ZNF320A2RRD8 509 aa20.45■□□□□ 0.86
DDX41-202ENST00000503078 OR4A8P0C604 315 aa20.45■□□□□ 0.86
DDX41-202ENST00000503078 MEOX1P50221 254 aa20.45■□□□□ 0.86
DDX41-202ENST00000503078 UBE2G2P60604 165 aa20.45■□□□□ 0.86
DDX41-202ENST00000503078 CST9LP1Q5W188 147 aa20.45■□□□□ 0.86
DDX41-202ENST00000503078 MRGPRDQ8TDS7 321 aa20.45■□□□□ 0.86
DDX41-202ENST00000503078 COQ2Q96H96 371 aa20.45■□□□□ 0.86
DDX41-202ENST00000503078 LURAP1Q96LR2 239 aa20.45■□□□□ 0.86
DDX41-202ENST00000503078 TRAV38-1A0A0B4J264 116 aa20.45■□□□□ 0.86
DDX41-202ENST00000503078 LINC00473A8K010 186 aa20.45■□□□□ 0.86
DDX41-202ENST00000503078 WNT9BO14905 357 aa20.45■□□□□ 0.86
DDX41-202ENST00000503078 NDUFB4O95168 129 aa20.45■□□□□ 0.86
DDX41-202ENST00000503078 CD1BP29016 333 aa20.45■□□□□ 0.86
DDX41-202ENST00000503078 PSG7Q13046 419 aa20.45■□□□□ 0.86
DDX41-202ENST00000503078 GCSAMLQ5JQS6 135 aa20.45■□□□□ 0.86
DDX41-202ENST00000503078 AURKAIP1Q9NWT8 199 aaPredicted RBP20.45■□□□□ 0.86
DDX41-202ENST00000503078 WASF3Q9UPY6 502 aa20.45■□□□□ 0.86
DDX41-202ENST00000503078 MARCH11A6NNE9 402 aa20.44■□□□□ 0.86
DDX41-202ENST00000503078 F6UZH7 168 aa20.44■□□□□ 0.86
DDX41-202ENST00000503078 CD82P27701 267 aa20.44■□□□□ 0.86
DDX41-202ENST00000503078 GABRA2P47869 451 aa20.44■□□□□ 0.86
DDX41-202ENST00000503078 FOXL1Q12952 345 aa20.44■□□□□ 0.86
DDX41-202ENST00000503078 DCAF10Q5QP82 559 aa20.44■□□□□ 0.86
DDX41-202ENST00000503078 HSD17B10Q99714 261 aaKnown RBP20.44■□□□□ 0.86
DDX41-202ENST00000503078 DERL1Q9BUN8 251 aa20.44■□□□□ 0.86
DDX41-202ENST00000503078 QTRT1Q9BXR0 403 aaKnown RBP20.44■□□□□ 0.86
DDX41-202ENST00000503078 PXMP4Q9Y6I8 212 aa20.44■□□□□ 0.86
DDX41-202ENST00000503078 C9orf172C9J069 976 aa20.43■□□□□ 0.86
DDX41-202ENST00000503078 FOSL1P15407 271 aa20.43■□□□□ 0.86
DDX41-202ENST00000503078 BMP5P22003 454 aa20.43■□□□□ 0.86
DDX41-202ENST00000503078 LINC00205P59089 165 aa20.43■□□□□ 0.86
DDX41-202ENST00000503078 WDR31Q8NA23 367 aa20.43■□□□□ 0.86
DDX41-202ENST00000503078 GTF3C1Q12789 2109 aa20.43■□□□□ 0.86
DDX41-202ENST00000503078 A0A1W2PPV4 95 aa20.43■□□□□ 0.86
DDX41-202ENST00000503078 SOX15O60248 233 aa20.43■□□□□ 0.86
DDX41-202ENST00000503078 SP1P08047 785 aa20.43■□□□□ 0.86
DDX41-202ENST00000503078 C1QTNF9P0C862 333 aa20.43■□□□□ 0.86
DDX41-202ENST00000503078 ZNF826PQ6ZT77 177 aa20.43■□□□□ 0.86
DDX41-202ENST00000503078 TGIF2LXQ8IUE1 241 aa20.43■□□□□ 0.86
DDX41-202ENST00000503078 OBP2BQ9NPH6 170 aa20.43■□□□□ 0.86
DDX41-202ENST00000503078 EDDM3BP56851 147 aa20.42■□□□□ 0.86
DDX41-202ENST00000503078 SPCS3P61009 180 aa20.42■□□□□ 0.86
DDX41-202ENST00000503078 Q6ZR03 302 aa20.42■□□□□ 0.86
DDX41-202ENST00000503078 CXorf67Q86X51 503 aaPredicted RBP20.42■□□□□ 0.86
DDX41-202ENST00000503078 WISP2O76076 250 aa20.42■□□□□ 0.86
DDX41-202ENST00000503078 WFIKKN1Q96NZ8 548 aa20.42■□□□□ 0.86
DDX41-202ENST00000503078 FKBP11Q9NYL4 201 aa20.42■□□□□ 0.86
DDX41-202ENST00000503078 KLF13Q9Y2Y9 288 aaPredicted RBP20.42■□□□□ 0.86
DDX41-202ENST00000503078 SSTR5P35346 364 aa20.41■□□□□ 0.86
DDX41-202ENST00000503078 UBE2NP61088 152 aaKnown RBP20.41■□□□□ 0.86
DDX41-202ENST00000503078 LPAL2Q16609 132 aa20.41■□□□□ 0.86
DDX41-202ENST00000503078 C11orf53Q8IXP5 236 aa20.41■□□□□ 0.86
DDX41-202ENST00000503078 ZNF114Q8NC26 417 aa20.41■□□□□ 0.86
DDX41-202ENST00000503078 R3HDM4Q96D70 268 aa20.41■□□□□ 0.86
DDX41-202ENST00000503078 IGHV3-43A0A0B4J1X8 118 aa20.41■□□□□ 0.86
DDX41-202ENST00000503078 IGHV3-43DP0DP04 118 aa20.41■□□□□ 0.86
DDX41-202ENST00000503078 HOXA4Q00056 320 aaPredicted RBP20.41■□□□□ 0.86
DDX41-202ENST00000503078 SFRP2Q96HF1 295 aa20.41■□□□□ 0.86
DDX41-202ENST00000503078 FOXJ2Q9P0K8 574 aa20.41■□□□□ 0.86
DDX41-202ENST00000503078 PSG11Q9UQ72 335 aa20.41■□□□□ 0.86
DDX41-202ENST00000503078 KLRC4-KLRK1H3BQV0 150 aa20.4■□□□□ 0.86
DDX41-202ENST00000503078 EREGO14944 169 aa20.4■□□□□ 0.86
DDX41-202ENST00000503078 OR9G9P0C7N8 305 aa20.4■□□□□ 0.86
DDX41-202ENST00000503078 MPV17P39210 176 aa20.4■□□□□ 0.86
DDX41-202ENST00000503078 RAB4BP61018 213 aa20.4■□□□□ 0.86
DDX41-202ENST00000503078 ACP7Q6ZNF0 438 aa20.4■□□□□ 0.86
DDX41-202ENST00000503078 PRR7Q8TB68 274 aa20.4■□□□□ 0.86
DDX41-202ENST00000503078 DEFB127Q9H1M4 99 aa20.4■□□□□ 0.86
DDX41-202ENST00000503078 ELOVL5Q9NYP7 299 aa20.4■□□□□ 0.86
DDX41-202ENST00000503078 PGPEP1LA6NFU8 196 aa20.39■□□□□ 0.86
DDX41-202ENST00000503078 ZNF891A8MT65 544 aaPredicted RBP20.39■□□□□ 0.86
DDX41-202ENST00000503078 MPDU1O75352 247 aa20.39■□□□□ 0.86
DDX41-202ENST00000503078 SCGB1D1O95968 90 aa20.39■□□□□ 0.86
DDX41-202ENST00000503078 TFF1P04155 84 aa20.39■□□□□ 0.86
DDX41-202ENST00000503078 NUTF2P61970 127 aaKnown RBP20.39■□□□□ 0.86
DDX41-202ENST00000503078 TEX38Q6PEX7 206 aa20.39■□□□□ 0.86
DDX41-202ENST00000503078 SGMS2Q8NHU3 365 aa20.39■□□□□ 0.86
DDX41-202ENST00000503078 TXNDC17Q9BRA2 123 aa20.39■□□□□ 0.86
DDX41-202ENST00000503078 PATZ1Q9HBE1 687 aaKnown RBP20.39■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms