RNA–Protein interactions for RNA: ENST00000494854.5

SHISA5-216, Transcript of shisa family member 5, humanhuman

TSL 1 (best)

Gene SHISA5, Length 1,908 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA5-216ENST00000494854 STRAPQ9Y3F4 350 aaKnown RBP12.88□□□□□ -0.35
SHISA5-216ENST00000494854 LRRC30A6NM36 301 aa12.87□□□□□ -0.35
SHISA5-216ENST00000494854 LINC00205P59089 165 aa12.87□□□□□ -0.35
SHISA5-216ENST00000494854 TMEM267Q0VDI3 215 aaPredicted RBP12.87□□□□□ -0.35
SHISA5-216ENST00000494854 TMEM182Q6ZP80 229 aaPredicted RBP12.87□□□□□ -0.35
SHISA5-216ENST00000494854 ATP5SQ99766 215 aa12.87□□□□□ -0.35
SHISA5-216ENST00000494854 TMEM231Q9H6L2 316 aa12.87□□□□□ -0.35
SHISA5-216ENST00000494854 TRGV10A0A0A0MS01 117 aa12.86□□□□□ -0.35
SHISA5-216ENST00000494854 PROP1O75360 226 aa12.86□□□□□ -0.35
SHISA5-216ENST00000494854 DFFBO76075 338 aa12.86□□□□□ -0.35
SHISA5-216ENST00000494854 PRH1P02810 166 aa12.86□□□□□ -0.35
SHISA5-216ENST00000494854 DUTP33316 252 aaKnown RBP12.86□□□□□ -0.35
SHISA5-216ENST00000494854 TAS2R30P59541 319 aa12.86□□□□□ -0.35
SHISA5-216ENST00000494854 DEFA5Q01523 94 aa12.86□□□□□ -0.35
SHISA5-216ENST00000494854 ZNF616Q08AN1 781 aa12.86□□□□□ -0.35
SHISA5-216ENST00000494854 DEFB113Q30KQ7 82 aa12.86□□□□□ -0.35
SHISA5-216ENST00000494854 MIDNQ504T8 468 aa12.86□□□□□ -0.35
SHISA5-216ENST00000494854 FAM209AQ5JX71 171 aa12.86□□□□□ -0.35
SHISA5-216ENST00000494854 NCMAPQ5T1S8 102 aa12.86□□□□□ -0.35
SHISA5-216ENST00000494854 FAM216BQ8N7L0 139 aa12.86□□□□□ -0.35
SHISA5-216ENST00000494854 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.86□□□□□ -0.35
SHISA5-216ENST00000494854 TSNAXQ99598 290 aaKnown RBP12.86□□□□□ -0.35
SHISA5-216ENST00000494854 EGLN1Q9GZT9 426 aa12.86□□□□□ -0.35
SHISA5-216ENST00000494854 KBTBD11-OT1A0A1B0GTJ5 212 aa12.86□□□□□ -0.35
SHISA5-216ENST00000494854 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.86□□□□□ -0.35
SHISA5-216ENST00000494854 SHISA9B4DS77 424 aa12.86□□□□□ -0.35
SHISA5-216ENST00000494854 RAB29O14966 203 aa12.86□□□□□ -0.35
SHISA5-216ENST00000494854 ADCYAP1P18509 176 aa12.86□□□□□ -0.35
SHISA5-216ENST00000494854 FHITP49789 147 aa12.86□□□□□ -0.35
SHISA5-216ENST00000494854 ZNF134P52741 427 aa12.86□□□□□ -0.35
SHISA5-216ENST00000494854 UBE2KP61086 200 aa12.86□□□□□ -0.35
SHISA5-216ENST00000494854 TNFRSF9Q07011 255 aa12.86□□□□□ -0.35
SHISA5-216ENST00000494854 NCR3LG1Q68D85 454 aa12.86□□□□□ -0.35
SHISA5-216ENST00000494854 OR2G3Q8NGZ4 309 aa12.86□□□□□ -0.35
SHISA5-216ENST00000494854 CD300LFQ8TDQ1 290 aa12.86□□□□□ -0.35
SHISA5-216ENST00000494854 TMEM204Q9BSN7 226 aa12.86□□□□□ -0.35
SHISA5-216ENST00000494854 IFI27L2Q9H2X8 130 aa12.86□□□□□ -0.35
SHISA5-216ENST00000494854 SAP30LQ9HAJ7 183 aa12.86□□□□□ -0.35
SHISA5-216ENST00000494854 C19orf12Q9NSK7 152 aa12.86□□□□□ -0.35
SHISA5-216ENST00000494854 UQCC1Q9NVA1 299 aa12.86□□□□□ -0.35
SHISA5-216ENST00000494854 BEX4Q9NWD9 120 aaPredicted RBP12.86□□□□□ -0.35
SHISA5-216ENST00000494854 GFOD1Q9NXC2 390 aa12.86□□□□□ -0.35
SHISA5-216ENST00000494854 CLN8Q9UBY8 286 aa12.86□□□□□ -0.35
SHISA5-216ENST00000494854 HSPB7Q9UBY9 170 aa12.86□□□□□ -0.35
SHISA5-216ENST00000494854 FAM96BQ9Y3D0 163 aa12.86□□□□□ -0.35
SHISA5-216ENST00000494854 TRIM77I1YAP6 450 aa12.85□□□□□ -0.35
SHISA5-216ENST00000494854 ITGB1BP1O14713 200 aa12.85□□□□□ -0.35
SHISA5-216ENST00000494854 AGPAT2O15120 278 aa12.85□□□□□ -0.35
SHISA5-216ENST00000494854 TSPAN15O95858 294 aa12.85□□□□□ -0.35
SHISA5-216ENST00000494854 IGHV3-7P01780 117 aa12.85□□□□□ -0.35
SHISA5-216ENST00000494854 ARHGDIBP52566 201 aa12.85□□□□□ -0.35
SHISA5-216ENST00000494854 BTN1A1Q13410 526 aa12.85□□□□□ -0.35
SHISA5-216ENST00000494854 ATRAIDQ6UW56 229 aa12.85□□□□□ -0.35
SHISA5-216ENST00000494854 TCF23Q7RTU1 214 aa12.85□□□□□ -0.35
SHISA5-216ENST00000494854 GNPNAT1Q96EK6 184 aaPredicted RBP12.85□□□□□ -0.35
SHISA5-216ENST00000494854 RBKSQ9H477 322 aa12.85□□□□□ -0.35
SHISA5-216ENST00000494854 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.85□□□□□ -0.35
SHISA5-216ENST00000494854 RFNGQ9Y644 331 aa12.85□□□□□ -0.35
SHISA5-216ENST00000494854 YLPM1P49750 1951 aaKnown RBP12.85□□□□□ -0.35
SHISA5-216ENST00000494854 NKX6-3A6NJ46 265 aa12.84□□□□□ -0.35
SHISA5-216ENST00000494854 E7EQL1 145 aa12.84□□□□□ -0.35
SHISA5-216ENST00000494854 F8W036 122 aa12.84□□□□□ -0.35
SHISA5-216ENST00000494854 METTL15P1P0C7V9 234 aa12.84□□□□□ -0.35
SHISA5-216ENST00000494854 H2BFWTQ7Z2G1 175 aa12.84□□□□□ -0.35
SHISA5-216ENST00000494854 TRAV38-1A0A0B4J264 116 aa12.84□□□□□ -0.35
SHISA5-216ENST00000494854 MARCH11A6NNE9 402 aa12.84□□□□□ -0.35
SHISA5-216ENST00000494854 UMAD1C9J7I0 102 aa12.84□□□□□ -0.35
SHISA5-216ENST00000494854 RNASEK-C17orf49H0YIS7 233 aa12.84□□□□□ -0.35
SHISA5-216ENST00000494854 M0R1X1 148 aa12.84□□□□□ -0.35
SHISA5-216ENST00000494854 TMPRSS2O15393 492 aa12.84□□□□□ -0.35
SHISA5-216ENST00000494854 SLC31A2O15432 143 aa12.84□□□□□ -0.35
SHISA5-216ENST00000494854 MTORP42345 2549 aa12.84□□□□□ -0.35
SHISA5-216ENST00000494854 RAB7AP51149 207 aa12.84□□□□□ -0.35
SHISA5-216ENST00000494854 RPL39P5Q59GN2 51 aa12.84□□□□□ -0.35
SHISA5-216ENST00000494854 SPANXN5Q5MJ07 72 aa12.84□□□□□ -0.35
SHISA5-216ENST00000494854 C10orf91Q5T1B1 145 aa12.84□□□□□ -0.35
SHISA5-216ENST00000494854 C1orf87Q8N0U7 546 aa12.84□□□□□ -0.35
SHISA5-216ENST00000494854 NEUROG1Q92886 237 aa12.84□□□□□ -0.35
SHISA5-216ENST00000494854 ABHD14AQ9BUJ0 271 aa12.84□□□□□ -0.35
SHISA5-216ENST00000494854 DOCK11Q5JSL3 2073 aa12.83□□□□□ -0.36
SHISA5-216ENST00000494854 ZNF729A6NN14 1252 aaPredicted RBP12.83□□□□□ -0.36
SHISA5-216ENST00000494854 FCGR3BO75015 233 aa12.83□□□□□ -0.36
SHISA5-216ENST00000494854 IFNA5P01569 189 aa12.83□□□□□ -0.36
SHISA5-216ENST00000494854 CD5P06127 495 aa12.83□□□□□ -0.36
SHISA5-216ENST00000494854 SNCAP37840 140 aa12.83□□□□□ -0.36
SHISA5-216ENST00000494854 RUNX1Q01196 453 aa12.83□□□□□ -0.36
SHISA5-216ENST00000494854 UTF1Q5T230 341 aa12.83□□□□□ -0.36
SHISA5-216ENST00000494854 COMMD1Q8N668 190 aa12.83□□□□□ -0.36
SHISA5-216ENST00000494854 FAM213BQ8TBF2 198 aa12.83□□□□□ -0.36
SHISA5-216ENST00000494854 CORO2AQ92828 525 aa12.83□□□□□ -0.36
SHISA5-216ENST00000494854 LEAP2Q969E1 77 aa12.83□□□□□ -0.36
SHISA5-216ENST00000494854 R3HDM4Q96D70 268 aa12.83□□□□□ -0.36
SHISA5-216ENST00000494854 GAB2Q9UQC2 676 aa12.83□□□□□ -0.36
SHISA5-216ENST00000494854 TMEM178BH3BS89 294 aa12.82□□□□□ -0.36
SHISA5-216ENST00000494854 HPRT1P00492 218 aa12.82□□□□□ -0.36
SHISA5-216ENST00000494854 CD3EP07766 207 aa12.82□□□□□ -0.36
SHISA5-216ENST00000494854 DVL1P1P54792 670 aaPredicted RBP12.82□□□□□ -0.36
SHISA5-216ENST00000494854 HBG1P69891 147 aa12.82□□□□□ -0.36
SHISA5-216ENST00000494854 HBG2P69892 147 aa12.82□□□□□ -0.36
SHISA5-216ENST00000494854 ARL16Q0P5N6 197 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms