RNA–Protein interactions for RNA: ENST00000492386.5

SEMA4D-220, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,396 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-220ENST00000492386 SRD5A3Q9H8P0 318 aa13.43□□□□□ -0.26
SEMA4D-220ENST00000492386 M0R296 226 aa13.42□□□□□ -0.26
SEMA4D-220ENST00000492386 PROP1O75360 226 aa13.42□□□□□ -0.26
SEMA4D-220ENST00000492386 HTD2P86397 168 aa13.42□□□□□ -0.26
SEMA4D-220ENST00000492386 PAX5Q02548 391 aa13.42□□□□□ -0.26
SEMA4D-220ENST00000492386 ZNF709Q8N972 641 aa13.42□□□□□ -0.26
SEMA4D-220ENST00000492386 OR51G1Q8NGK1 321 aa13.42□□□□□ -0.26
SEMA4D-220ENST00000492386 QTRT1Q9BXR0 403 aaKnown RBP13.42□□□□□ -0.26
SEMA4D-220ENST00000492386 HCFC1P51610 2035 aa13.42□□□□□ -0.26
SEMA4D-220ENST00000492386 ZNF729A6NN14 1252 aaPredicted RBP13.42□□□□□ -0.26
SEMA4D-220ENST00000492386 FABP4P15090 132 aa13.42□□□□□ -0.26
SEMA4D-220ENST00000492386 TUBG1P23258 451 aa13.42□□□□□ -0.26
SEMA4D-220ENST00000492386 R3HDM4Q96D70 268 aa13.42□□□□□ -0.26
SEMA4D-220ENST00000492386 TUBG2Q9NRH3 451 aa13.42□□□□□ -0.26
SEMA4D-220ENST00000492386 BDP1A6H8Y1 2624 aa13.41□□□□□ -0.26
SEMA4D-220ENST00000492386 PAGE4O60829 102 aa13.41□□□□□ -0.26
SEMA4D-220ENST00000492386 ADH4P08319 380 aa13.41□□□□□ -0.26
SEMA4D-220ENST00000492386 OR9G9P0C7N8 305 aa13.41□□□□□ -0.26
SEMA4D-220ENST00000492386 GZMHP20718 246 aa13.41□□□□□ -0.26
SEMA4D-220ENST00000492386 AARDQ4LEZ3 155 aa13.41□□□□□ -0.26
SEMA4D-220ENST00000492386 NECAP1Q8NC96 275 aa13.41□□□□□ -0.26
SEMA4D-220ENST00000492386 LRRC29Q8WV35 223 aa13.41□□□□□ -0.26
SEMA4D-220ENST00000492386 DIRC2Q96SL1 478 aa13.41□□□□□ -0.26
SEMA4D-220ENST00000492386 PRDM13Q9H4Q3 707 aa13.41□□□□□ -0.26
SEMA4D-220ENST00000492386 A0A1B0GWJ7 208 aa13.4□□□□□ -0.26
SEMA4D-220ENST00000492386 H7BYZ3 331 aa13.4□□□□□ -0.26
SEMA4D-220ENST00000492386 NKX2-8O15522 239 aa13.4□□□□□ -0.26
SEMA4D-220ENST00000492386 SPINT2O43291 252 aa13.4□□□□□ -0.26
SEMA4D-220ENST00000492386 IGLV1-44P01699 117 aa13.4□□□□□ -0.26
SEMA4D-220ENST00000492386 DUTP33316 252 aaKnown RBP13.4□□□□□ -0.26
SEMA4D-220ENST00000492386 RTP5Q14D33 572 aa13.4□□□□□ -0.26
SEMA4D-220ENST00000492386 ZNF718Q3SXZ3 478 aa13.4□□□□□ -0.26
SEMA4D-220ENST00000492386 ELOVL1Q9BW60 279 aa13.4□□□□□ -0.26
SEMA4D-220ENST00000492386 PITPNC1Q9UKF7 332 aa13.4□□□□□ -0.26
SEMA4D-220ENST00000492386 WASF3Q9UPY6 502 aa13.4□□□□□ -0.26
SEMA4D-220ENST00000492386 IGHV2OR16-5A0A0B4J2B6 119 aa13.4□□□□□ -0.26
SEMA4D-220ENST00000492386 C17orf112F2Z3M2 114 aa13.4□□□□□ -0.26
SEMA4D-220ENST00000492386 HIST1H1BP16401 226 aaKnown RBP13.4□□□□□ -0.26
SEMA4D-220ENST00000492386 EGR1P18146 543 aa13.4□□□□□ -0.26
SEMA4D-220ENST00000492386 PRDX2P32119 198 aa13.4□□□□□ -0.26
SEMA4D-220ENST00000492386 GALR1P47211 349 aa13.4□□□□□ -0.26
SEMA4D-220ENST00000492386 CCL11P51671 97 aa13.4□□□□□ -0.26
SEMA4D-220ENST00000492386 SRSF6Q13247 344 aaKnown RBP13.4□□□□□ -0.26
SEMA4D-220ENST00000492386 EDDM3AQ14507 147 aa13.4□□□□□ -0.26
SEMA4D-220ENST00000492386 LTC4SQ16873 150 aa13.4□□□□□ -0.26
SEMA4D-220ENST00000492386 C9orf152Q5JTZ5 239 aa13.4□□□□□ -0.26
SEMA4D-220ENST00000492386 MBNL2Q5VZF2 373 aaKnown RBP13.4□□□□□ -0.26
SEMA4D-220ENST00000492386 TRAT1Q6PIZ9 186 aa13.4□□□□□ -0.26
SEMA4D-220ENST00000492386 FDCSPQ8NFU4 85 aa13.4□□□□□ -0.26
SEMA4D-220ENST00000492386 NEIL1Q96FI4 390 aaPredicted RBP13.4□□□□□ -0.26
SEMA4D-220ENST00000492386 HIST1H2BLQ99880 126 aa13.4□□□□□ -0.26
SEMA4D-220ENST00000492386 OR6C3Q9NZP0 311 aa13.4□□□□□ -0.26
SEMA4D-220ENST00000492386 GAB2Q9UQC2 676 aa13.4□□□□□ -0.26
SEMA4D-220ENST00000492386 WDR83OSQ9Y284 106 aa13.4□□□□□ -0.26
SEMA4D-220ENST00000492386 AQP7O14520 342 aa13.39□□□□□ -0.27
SEMA4D-220ENST00000492386 NPPCP23582 126 aa13.39□□□□□ -0.27
SEMA4D-220ENST00000492386 GCH1P30793 250 aa13.39□□□□□ -0.27
SEMA4D-220ENST00000492386 CDC34P49427 236 aaPredicted RBP13.39□□□□□ -0.27
SEMA4D-220ENST00000492386 TGIF2LYQ8IUE0 185 aa13.39□□□□□ -0.27
SEMA4D-220ENST00000492386 DSPP15924 2871 aaKnown RBP13.39□□□□□ -0.27
SEMA4D-220ENST00000492386 IGHV1-18A0A0C4DH31 117 aa13.39□□□□□ -0.27
SEMA4D-220ENST00000492386 GYPAP02724 150 aa13.39□□□□□ -0.27
SEMA4D-220ENST00000492386 GPR12P47775 334 aa13.39□□□□□ -0.27
SEMA4D-220ENST00000492386 ACOT6Q3I5F7 207 aaPredicted RBP13.39□□□□□ -0.27
SEMA4D-220ENST00000492386 DNLZQ5SXM8 178 aa13.39□□□□□ -0.27
SEMA4D-220ENST00000492386 Q8TCH9 128 aa13.39□□□□□ -0.27
SEMA4D-220ENST00000492386 PFDN5Q99471 154 aa13.39□□□□□ -0.27
SEMA4D-220ENST00000492386 HEATR1Q9H583 2144 aaKnown RBP13.39□□□□□ -0.27
SEMA4D-220ENST00000492386 INTS1Q8N201 2190 aaKnown RBP13.38□□□□□ -0.27
SEMA4D-220ENST00000492386 IGKV1D-17A0A075B6S4 117 aa13.38□□□□□ -0.27
SEMA4D-220ENST00000492386 PRR33A8MZF0 331 aa13.38□□□□□ -0.27
SEMA4D-220ENST00000492386 HRASP01112 189 aa13.38□□□□□ -0.27
SEMA4D-220ENST00000492386 CD1BP29016 333 aa13.38□□□□□ -0.27
SEMA4D-220ENST00000492386 GCSAMLQ5JQS6 135 aa13.38□□□□□ -0.27
SEMA4D-220ENST00000492386 FAM90A1Q86YD7 464 aa13.38□□□□□ -0.27
SEMA4D-220ENST00000492386 PLPPR2Q96GM1 343 aa13.38□□□□□ -0.27
SEMA4D-220ENST00000492386 PACRGQ96M98 296 aaPredicted RBP13.38□□□□□ -0.27
SEMA4D-220ENST00000492386 OR5B12Q96R08 314 aa13.38□□□□□ -0.27
SEMA4D-220ENST00000492386 PLSCR4Q9NRQ2 329 aa13.38□□□□□ -0.27
SEMA4D-220ENST00000492386 ZMAT5Q9UDW3 170 aaKnown RBP13.38□□□□□ -0.27
SEMA4D-220ENST00000492386 TET2Q6N021 2002 aaPredicted RBP13.38□□□□□ -0.27
SEMA4D-220ENST00000492386 SMCO3A2RU48 225 aa13.38□□□□□ -0.27
SEMA4D-220ENST00000492386 C11orf94C9JXX5 98 aa13.38□□□□□ -0.27
SEMA4D-220ENST00000492386 FCGR3BO75015 233 aa13.38□□□□□ -0.27
SEMA4D-220ENST00000492386 VENTXO95231 258 aa13.38□□□□□ -0.27
SEMA4D-220ENST00000492386 MORN2Q502X0 79 aa13.38□□□□□ -0.27
SEMA4D-220ENST00000492386 TMEM183AQ8IXX5 376 aa13.38□□□□□ -0.27
SEMA4D-220ENST00000492386 FAM90A9PA6NNJ1 464 aa13.37□□□□□ -0.27
SEMA4D-220ENST00000492386 HPRT1P00492 218 aa13.37□□□□□ -0.27
SEMA4D-220ENST00000492386 ANAPC16Q96DE5 110 aa13.37□□□□□ -0.27
SEMA4D-220ENST00000492386 PCGF1Q9BSM1 259 aa13.37□□□□□ -0.27
SEMA4D-220ENST00000492386 TRAV38-1A0A0B4J264 116 aa13.37□□□□□ -0.27
SEMA4D-220ENST00000492386 SRRM5B3KS81 715 aa13.37□□□□□ -0.27
SEMA4D-220ENST00000492386 GATCO43716 136 aaKnown RBP13.37□□□□□ -0.27
SEMA4D-220ENST00000492386 MSMPQ1L6U9 139 aa13.37□□□□□ -0.27
SEMA4D-220ENST00000492386 TMEM249Q2WGJ8 235 aa13.37□□□□□ -0.27
SEMA4D-220ENST00000492386 IGFL2Q6UWQ7 119 aa13.37□□□□□ -0.27
SEMA4D-220ENST00000492386 SSX9Q7RTT3 188 aa13.37□□□□□ -0.27
SEMA4D-220ENST00000492386 OR2Z1Q8NG97 314 aa13.37□□□□□ -0.27
SEMA4D-220ENST00000492386 GNG12Q9UBI6 72 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms