RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 DEFB121Q5J5C9 76 aa7.52□□□□□ -1.21
TMEM39A-210ENST00000490099 TMEM65Q6PI78 240 aa7.52□□□□□ -1.21
TMEM39A-210ENST00000490099 PDPNQ86YL7 162 aa7.52□□□□□ -1.21
TMEM39A-210ENST00000490099 ACOT12Q8WYK0 555 aa7.52□□□□□ -1.21
TMEM39A-210ENST00000490099 RHOVQ96L33 236 aa7.52□□□□□ -1.21
TMEM39A-210ENST00000490099 TSNAXQ99598 290 aaKnown RBP7.52□□□□□ -1.21
TMEM39A-210ENST00000490099 DCUN1D5Q9BTE7 237 aa7.52□□□□□ -1.21
TMEM39A-210ENST00000490099 ZNF221Q9UK13 617 aa7.52□□□□□ -1.21
TMEM39A-210ENST00000490099 A3GALT2U3KPV4 340 aa7.52□□□□□ -1.21
TMEM39A-210ENST00000490099 ELOA3CA0A087WX78 387 aaPredicted RBP7.51□□□□□ -1.21
TMEM39A-210ENST00000490099 H7C2Y5 167 aa7.51□□□□□ -1.21
TMEM39A-210ENST00000490099 CD3GP09693 182 aa7.51□□□□□ -1.21
TMEM39A-210ENST00000490099 GNB3P16520 340 aa7.51□□□□□ -1.21
TMEM39A-210ENST00000490099 TGFBR1P36897 503 aa7.51□□□□□ -1.21
TMEM39A-210ENST00000490099 LGALS7P47929 136 aa7.51□□□□□ -1.21
TMEM39A-210ENST00000490099 SCAND1P57086 179 aa7.51□□□□□ -1.21
TMEM39A-210ENST00000490099 TAGLNQ01995 201 aaKnown RBP7.51□□□□□ -1.21
TMEM39A-210ENST00000490099 PYHIN1Q6K0P9 492 aa7.51□□□□□ -1.21
TMEM39A-210ENST00000490099 C11orf87Q6NUJ2 197 aa7.51□□□□□ -1.21
TMEM39A-210ENST00000490099 SFXN4Q6P4A7 337 aa7.51□□□□□ -1.21
TMEM39A-210ENST00000490099 MZT2AQ6P582 158 aa7.51□□□□□ -1.21
TMEM39A-210ENST00000490099 PPP1R27Q86WC6 154 aa7.51□□□□□ -1.21
TMEM39A-210ENST00000490099 DDB2Q92466 427 aa7.51□□□□□ -1.21
TMEM39A-210ENST00000490099 C5orf30Q96GV9 206 aa7.51□□□□□ -1.21
TMEM39A-210ENST00000490099 SDHAF2Q9NX18 166 aa7.51□□□□□ -1.21
TMEM39A-210ENST00000490099 METTL1Q9UBP6 276 aaKnown RBP7.51□□□□□ -1.21
TMEM39A-210ENST00000490099 STAB2Q8WWQ8 2551 aa7.5□□□□□ -1.21
TMEM39A-210ENST00000490099 IGKV1D-8A0A087WSZ0 117 aa7.5□□□□□ -1.21
TMEM39A-210ENST00000490099 A0A0B4J203 849 aa7.5□□□□□ -1.21
TMEM39A-210ENST00000490099 METTL21EPA6NDL7 271 aa7.5□□□□□ -1.21
TMEM39A-210ENST00000490099 SRRM4A7MD48 611 aaKnown RBP7.5□□□□□ -1.21
TMEM39A-210ENST00000490099 M0R1X1 148 aa7.5□□□□□ -1.21
TMEM39A-210ENST00000490099 ARPC1BO15143 372 aaKnown RBP7.5□□□□□ -1.21
TMEM39A-210ENST00000490099 LGALS1P09382 135 aaKnown RBP7.5□□□□□ -1.21
TMEM39A-210ENST00000490099 CLEC2LP0C7M8 214 aa7.5□□□□□ -1.21
TMEM39A-210ENST00000490099 OR8U9P0C7N5 309 aa7.5□□□□□ -1.21
TMEM39A-210ENST00000490099 NHLRC4P0CG21 123 aaPredicted RBP7.5□□□□□ -1.21
TMEM39A-210ENST00000490099 DTYMKP23919 212 aa7.5□□□□□ -1.21
TMEM39A-210ENST00000490099 RAB25P57735 213 aa7.5□□□□□ -1.21
TMEM39A-210ENST00000490099 RPS16P62249 146 aaKnown RBP7.5□□□□□ -1.21
TMEM39A-210ENST00000490099 ARL6IP1Q15041 203 aa7.5□□□□□ -1.21
TMEM39A-210ENST00000490099 ZNF260Q3ZCT1 412 aa7.5□□□□□ -1.21
TMEM39A-210ENST00000490099 TMEM177Q53S58 311 aa7.5□□□□□ -1.21
TMEM39A-210ENST00000490099 ACTBL2Q562R1 376 aa7.5□□□□□ -1.21
TMEM39A-210ENST00000490099 H1FOOQ8IZA3 346 aaPredicted RBP7.5□□□□□ -1.21
TMEM39A-210ENST00000490099 LFNGQ8NES3 379 aa7.5□□□□□ -1.21
TMEM39A-210ENST00000490099 OR10J5Q8NHC4 309 aa7.5□□□□□ -1.21
TMEM39A-210ENST00000490099 MCFD2Q8NI22 146 aa7.5□□□□□ -1.21
TMEM39A-210ENST00000490099 DCUN1D4Q92564 292 aa7.5□□□□□ -1.21
TMEM39A-210ENST00000490099 DLX4Q92988 240 aaPredicted RBP7.5□□□□□ -1.21
TMEM39A-210ENST00000490099 FLYWCH2Q96CP2 140 aaKnown RBP7.5□□□□□ -1.21
TMEM39A-210ENST00000490099 SLA2Q9H6Q3 261 aa7.5□□□□□ -1.21
TMEM39A-210ENST00000490099 ZNF230Q9UIE0 474 aaPredicted RBP7.5□□□□□ -1.21
TMEM39A-210ENST00000490099 DAPK2Q9UIK4 370 aa7.5□□□□□ -1.21
TMEM39A-210ENST00000490099 ADAM30Q9UKF2 790 aa7.5□□□□□ -1.21
TMEM39A-210ENST00000490099 A0A075B6Q4 140 aa7.49□□□□□ -1.21
TMEM39A-210ENST00000490099 A0A1W2PN81 502 aa7.49□□□□□ -1.21
TMEM39A-210ENST00000490099 H3BUA1 57 aa7.49□□□□□ -1.21
TMEM39A-210ENST00000490099 SLC25A17O43808 307 aa7.49□□□□□ -1.21
TMEM39A-210ENST00000490099 CA2P00918 260 aa7.49□□□□□ -1.21
TMEM39A-210ENST00000490099 HSPB1P04792 205 aaKnown RBP7.49□□□□□ -1.21
TMEM39A-210ENST00000490099 S100A5P33763 92 aa7.49□□□□□ -1.21
TMEM39A-210ENST00000490099 CHRNA7P36544 502 aa7.49□□□□□ -1.21
TMEM39A-210ENST00000490099 ECI1P42126 302 aa7.49□□□□□ -1.21
TMEM39A-210ENST00000490099 PJVKQ0ZLH3 352 aa7.49□□□□□ -1.21
TMEM39A-210ENST00000490099 FXYD3Q14802 87 aa7.49□□□□□ -1.21
TMEM39A-210ENST00000490099 ECSCRQ19T08 205 aa7.49□□□□□ -1.21
TMEM39A-210ENST00000490099 IDNKQ5T6J7 187 aa7.49□□□□□ -1.21
TMEM39A-210ENST00000490099 LINC00299Q6ZSB3 139 aa7.49□□□□□ -1.21
TMEM39A-210ENST00000490099 ZNF429Q86V71 674 aa7.49□□□□□ -1.21
TMEM39A-210ENST00000490099 ARPC1AQ92747 370 aa7.49□□□□□ -1.21
TMEM39A-210ENST00000490099 TMEM68Q96MH6 324 aa7.49□□□□□ -1.21
TMEM39A-210ENST00000490099 OR5B12Q96R08 314 aa7.49□□□□□ -1.21
TMEM39A-210ENST00000490099 SLIRPQ9GZT3 109 aaKnown RBP7.49□□□□□ -1.21
TMEM39A-210ENST00000490099 ALX4Q9H161 411 aaPredicted RBP7.49□□□□□ -1.21
TMEM39A-210ENST00000490099 SLC35D1Q9NTN3 355 aa7.49□□□□□ -1.21
TMEM39A-210ENST00000490099 ELF5Q9UKW6 265 aaPredicted RBP7.49□□□□□ -1.21
TMEM39A-210ENST00000490099 ZNF256Q9Y2P7 627 aaPredicted RBP7.49□□□□□ -1.21
TMEM39A-210ENST00000490099 ETV7Q9Y603 341 aa7.49□□□□□ -1.21
TMEM39A-210ENST00000490099 SMIM30A4D0T7 59 aa7.48□□□□□ -1.21
TMEM39A-210ENST00000490099 LINC01619G3V211 115 aa7.48□□□□□ -1.21
TMEM39A-210ENST00000490099 OVOL1O14753 267 aa7.48□□□□□ -1.21
TMEM39A-210ENST00000490099 BET1O15155 118 aa7.48□□□□□ -1.21
TMEM39A-210ENST00000490099 IGLV2-14P01704 120 aa7.48□□□□□ -1.21
TMEM39A-210ENST00000490099 APOA2P02652 100 aa7.48□□□□□ -1.21
TMEM39A-210ENST00000490099 CTXN2P0C2S0 81 aa7.48□□□□□ -1.21
TMEM39A-210ENST00000490099 RRASP10301 218 aa7.48□□□□□ -1.21
TMEM39A-210ENST00000490099 DUTP33316 252 aaKnown RBP7.48□□□□□ -1.21
TMEM39A-210ENST00000490099 CD69Q07108 199 aa7.48□□□□□ -1.21
TMEM39A-210ENST00000490099 PLGLAQ15195 96 aa7.48□□□□□ -1.21
TMEM39A-210ENST00000490099 CDNFQ49AH0 187 aa7.48□□□□□ -1.21
TMEM39A-210ENST00000490099 HACD4Q5VWC8 232 aa7.48□□□□□ -1.21
TMEM39A-210ENST00000490099 ACSM6Q6P461 480 aa7.48□□□□□ -1.21
TMEM39A-210ENST00000490099 UNQ5815/PRO19632Q6UWF5 114 aa7.48□□□□□ -1.21
TMEM39A-210ENST00000490099 NBEAL2Q6ZNJ1 2754 aa7.48□□□□□ -1.21
TMEM39A-210ENST00000490099 TEX45Q8NA69 505 aa7.48□□□□□ -1.21
TMEM39A-210ENST00000490099 CASTOR1Q8WTX7 329 aa7.48□□□□□ -1.21
TMEM39A-210ENST00000490099 ADTRPQ96IZ2 230 aa7.48□□□□□ -1.21
TMEM39A-210ENST00000490099 CMTM3Q96MX0 182 aa7.48□□□□□ -1.21
TMEM39A-210ENST00000490099 PRR25Q96S07 402 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms