RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 GNG3P63215 75 aa2.2□□□□□ -2.06
DEPDC1-204ENST00000489862 CDK5Q00535 292 aa2.2□□□□□ -2.06
DEPDC1-204ENST00000489862 TMEM267Q0VDI3 215 aaPredicted RBP2.2□□□□□ -2.06
DEPDC1-204ENST00000489862 ERCC8Q13216 396 aa2.2□□□□□ -2.06
DEPDC1-204ENST00000489862 APOFQ13790 326 aa2.2□□□□□ -2.06
DEPDC1-204ENST00000489862 EDDM3AQ14507 147 aa2.2□□□□□ -2.06
DEPDC1-204ENST00000489862 IRF4Q15306 451 aa2.2□□□□□ -2.06
DEPDC1-204ENST00000489862 SPA17Q15506 151 aa2.2□□□□□ -2.06
DEPDC1-204ENST00000489862 HIST3H3Q16695 136 aa2.2□□□□□ -2.06
DEPDC1-204ENST00000489862 CLEC12BQ2HXU8 276 aa2.2□□□□□ -2.06
DEPDC1-204ENST00000489862 TMEM97Q5BJF2 176 aa2.2□□□□□ -2.06
DEPDC1-204ENST00000489862 C1orf194Q5T5A4 169 aa2.2□□□□□ -2.06
DEPDC1-204ENST00000489862 TNFAIP8L2Q6P589 184 aaPredicted RBP2.2□□□□□ -2.06
DEPDC1-204ENST00000489862 ZNF773Q6PK81 442 aa2.2□□□□□ -2.06
DEPDC1-204ENST00000489862 SLC36A1Q7Z2H8 476 aa2.2□□□□□ -2.06
DEPDC1-204ENST00000489862 ZNF584Q8IVC4 421 aa2.2□□□□□ -2.06
DEPDC1-204ENST00000489862 UBAC2Q8NBM4 344 aa2.2□□□□□ -2.06
DEPDC1-204ENST00000489862 TNFAIP8L1Q8WVP5 186 aa2.2□□□□□ -2.06
DEPDC1-204ENST00000489862 UCN3Q969E3 161 aa2.2□□□□□ -2.06
DEPDC1-204ENST00000489862 SMIM14Q96QK8 99 aa2.2□□□□□ -2.06
DEPDC1-204ENST00000489862 OR2M4Q96R27 311 aa2.2□□□□□ -2.06
DEPDC1-204ENST00000489862 EBPLQ9BY08 206 aa2.2□□□□□ -2.06
DEPDC1-204ENST00000489862 FGF23Q9GZV9 251 aaPredicted RBP2.2□□□□□ -2.06
DEPDC1-204ENST00000489862 FAM107BQ9H098 131 aa2.2□□□□□ -2.06
DEPDC1-204ENST00000489862 ZNF230Q9UIE0 474 aaPredicted RBP2.2□□□□□ -2.06
DEPDC1-204ENST00000489862 DNAJC12Q9UKB3 198 aa2.2□□□□□ -2.06
DEPDC1-204ENST00000489862 TP53TG3Q9ULZ0 132 aa2.2□□□□□ -2.06
DEPDC1-204ENST00000489862 GVINP1Q7Z2Y8 2422 aa2.2□□□□□ -2.06
DEPDC1-204ENST00000489862 PIEZO1Q92508 2521 aa2.2□□□□□ -2.06
DEPDC1-204ENST00000489862 SPTBN4Q9H254 2564 aa2.2□□□□□ -2.06
DEPDC1-204ENST00000489862 ASPMQ8IZT6 3477 aa2.2□□□□□ -2.06
DEPDC1-204ENST00000489862 WDFY3Q8IZQ1 3526 aa2.2□□□□□ -2.06
DEPDC1-204ENST00000489862 MYO18AQ92614 2054 aaKnown RBP2.2□□□□□ -2.06
DEPDC1-204ENST00000489862 PATJQ8NI35 1801 aa2.2□□□□□ -2.06
DEPDC1-204ENST00000489862 A0A1B0GV72 72 aa2.2□□□□□ -2.06
DEPDC1-204ENST00000489862 WI2-2373I1.2A0A1W2PRP0 233 aa2.2□□□□□ -2.06
DEPDC1-204ENST00000489862 EEF1E1-BLOC1S5C9J1V9 151 aa2.2□□□□□ -2.06
DEPDC1-204ENST00000489862 ARPC5O15511 151 aa2.2□□□□□ -2.06
DEPDC1-204ENST00000489862 EEF1E1O43324 174 aaKnown RBP2.2□□□□□ -2.06
DEPDC1-204ENST00000489862 IFNA21P01568 189 aa2.2□□□□□ -2.06
DEPDC1-204ENST00000489862 PFN1P07737 140 aaKnown RBP2.2□□□□□ -2.06
DEPDC1-204ENST00000489862 CISD3P0C7P0 127 aa2.2□□□□□ -2.06
DEPDC1-204ENST00000489862 FGF6P10767 208 aa2.2□□□□□ -2.06
DEPDC1-204ENST00000489862 PSMB9P28065 219 aa2.2□□□□□ -2.06
DEPDC1-204ENST00000489862 AGTR1P30556 359 aa2.2□□□□□ -2.06
DEPDC1-204ENST00000489862 S100A7P31151 101 aa2.2□□□□□ -2.06
DEPDC1-204ENST00000489862 TALDO1P37837 337 aa2.2□□□□□ -2.06
DEPDC1-204ENST00000489862 CXCL5P42830 114 aa2.2□□□□□ -2.06
DEPDC1-204ENST00000489862 CMC4P56277 68 aaPredicted RBP2.2□□□□□ -2.06
DEPDC1-204ENST00000489862 RAB2AP61019 212 aa2.2□□□□□ -2.06
DEPDC1-204ENST00000489862 BTN3A2P78410 334 aa2.2□□□□□ -2.06
DEPDC1-204ENST00000489862 S100A12P80511 92 aa2.2□□□□□ -2.06
DEPDC1-204ENST00000489862 IFITM3Q01628 133 aa2.2□□□□□ -2.06
DEPDC1-204ENST00000489862 MYL5Q02045 173 aa2.2□□□□□ -2.06
DEPDC1-204ENST00000489862 PMAIP1Q13794 54 aa2.2□□□□□ -2.06
DEPDC1-204ENST00000489862 FAM182AQ5T1J6 154 aa2.2□□□□□ -2.06
DEPDC1-204ENST00000489862 WDR59Q6PJI9 974 aa2.2□□□□□ -2.06
DEPDC1-204ENST00000489862 ATP5L2Q7Z4Y8 100 aa2.2□□□□□ -2.06
DEPDC1-204ENST00000489862 VN1R4Q7Z5H5 301 aa2.2□□□□□ -2.06
DEPDC1-204ENST00000489862 PHF13Q86YI8 300 aaPredicted RBP2.2□□□□□ -2.06
DEPDC1-204ENST00000489862 SLC25A45Q8N413 288 aa2.2□□□□□ -2.06
DEPDC1-204ENST00000489862 TMEM105Q8N8V8 129 aa2.2□□□□□ -2.06
DEPDC1-204ENST00000489862 ST6GALNAC3Q8NDV1 305 aa2.2□□□□□ -2.06
DEPDC1-204ENST00000489862 OR9I1Q8NGQ6 314 aa2.2□□□□□ -2.06
DEPDC1-204ENST00000489862 OR1J4Q8NGS1 313 aa2.2□□□□□ -2.06
DEPDC1-204ENST00000489862 OR10G6Q8NH81 332 aa2.2□□□□□ -2.06
DEPDC1-204ENST00000489862 MFSD8Q8NHS3 518 aa2.2□□□□□ -2.06
DEPDC1-204ENST00000489862 LINC01006Q8NI28 216 aa2.2□□□□□ -2.06
DEPDC1-204ENST00000489862 PYDC1Q8WXC3 89 aa2.2□□□□□ -2.06
DEPDC1-204ENST00000489862 TCEAL3Q969E4 200 aa2.2□□□□□ -2.06
DEPDC1-204ENST00000489862 TMBIM1Q969X1 311 aa2.2□□□□□ -2.06
DEPDC1-204ENST00000489862 PAXXQ9BUH6 204 aa2.2□□□□□ -2.06
DEPDC1-204ENST00000489862 GGTLC1Q9BX51 225 aa2.2□□□□□ -2.06
DEPDC1-204ENST00000489862 TSSK6Q9BXA6 273 aa2.2□□□□□ -2.06
DEPDC1-204ENST00000489862 ZNF717Q9BY31 904 aaPredicted RBP2.2□□□□□ -2.06
DEPDC1-204ENST00000489862 CDC42EP4Q9H3Q1 356 aaKnown RBP2.2□□□□□ -2.06
DEPDC1-204ENST00000489862 MRPL27Q9P0M9 148 aaKnown RBP2.2□□□□□ -2.06
DEPDC1-204ENST00000489862 ENOPH1Q9UHY7 261 aa2.2□□□□□ -2.06
DEPDC1-204ENST00000489862 POMPQ9Y244 141 aa2.2□□□□□ -2.06
DEPDC1-204ENST00000489862 UTP11Q9Y3A2 253 aaKnown RBP2.2□□□□□ -2.06
DEPDC1-204ENST00000489862 OTOGLQ3ZCN5 2332 aa2.19□□□□□ -2.06
DEPDC1-204ENST00000489862 KNL1Q8NG31 2342 aa2.19□□□□□ -2.06
DEPDC1-204ENST00000489862 TET2Q6N021 2002 aaPredicted RBP2.19□□□□□ -2.06
DEPDC1-204ENST00000489862 FREM2Q5SZK8 3169 aa2.19□□□□□ -2.06
DEPDC1-204ENST00000489862 KIF26AQ9ULI4 1882 aaPredicted RBP2.19□□□□□ -2.06
DEPDC1-204ENST00000489862 ZFHX4Q86UP3 3567 aa2.19□□□□□ -2.06
DEPDC1-204ENST00000489862 PTPRZ1P23471 2315 aaPredicted RBP2.19□□□□□ -2.06
DEPDC1-204ENST00000489862 FRYQ5TBA9 3013 aa2.19□□□□□ -2.06
DEPDC1-204ENST00000489862 TMED7-TICAM2A0A0A6YYA0 188 aa2.19□□□□□ -2.06
DEPDC1-204ENST00000489862 A0A1W2PQ67 120 aa2.19□□□□□ -2.06
DEPDC1-204ENST00000489862 PGPA6NDG6 321 aa2.19□□□□□ -2.06
DEPDC1-204ENST00000489862 ZNF705GA8MUZ8 300 aaPredicted RBP2.19□□□□□ -2.06
DEPDC1-204ENST00000489862 STK16O75716 305 aa2.19□□□□□ -2.06
DEPDC1-204ENST00000489862 YIF1AO95070 293 aa2.19□□□□□ -2.06
DEPDC1-204ENST00000489862 S1PR2O95136 353 aa2.19□□□□□ -2.06
DEPDC1-204ENST00000489862 CYB5R3P00387 301 aaPredicted RBP2.19□□□□□ -2.06
DEPDC1-204ENST00000489862 IGKV1-39P01597 117 aa2.19□□□□□ -2.06
DEPDC1-204ENST00000489862 IGLV3-25P01717 112 aa2.19□□□□□ -2.06
DEPDC1-204ENST00000489862 IGHV3-13P01766 116 aa2.19□□□□□ -2.06
DEPDC1-204ENST00000489862 IGKV1D-39P04432 117 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 115.3 ms