RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 TSNAXQ99598 290 aaKnown RBP8.92□□□□□ -0.98
HDLBP-242ENST00000488013 SLC35D1Q9NTN3 355 aa8.92□□□□□ -0.98
HDLBP-242ENST00000488013 C1RLQ9NZP8 487 aa8.92□□□□□ -0.98
HDLBP-242ENST00000488013 PITPNC1Q9UKF7 332 aa8.92□□□□□ -0.98
HDLBP-242ENST00000488013 ITPR3Q14573 2671 aa8.92□□□□□ -0.98
HDLBP-242ENST00000488013 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.92□□□□□ -0.989e-9■■■□□ 17.9
HDLBP-242ENST00000488013 CSPG4Q6UVK1 2322 aa8.92□□□□□ -0.98
HDLBP-242ENST00000488013 A0A1W2PPI3 338 aa8.91□□□□□ -0.98
HDLBP-242ENST00000488013 A0A1W2PRD5 423 aa8.91□□□□□ -0.98
HDLBP-242ENST00000488013 A0A1W2PRF3 423 aa8.91□□□□□ -0.98
HDLBP-242ENST00000488013 A0A1W2PRM7 423 aa8.91□□□□□ -0.98
HDLBP-242ENST00000488013 LINC00473A8K010 186 aa8.91□□□□□ -0.98
HDLBP-242ENST00000488013 TIMM23O14925 209 aa8.91□□□□□ -0.98
HDLBP-242ENST00000488013 LY6G6DO95868 133 aa8.91□□□□□ -0.98
HDLBP-242ENST00000488013 MOSP00540 346 aa8.91□□□□□ -0.98
HDLBP-242ENST00000488013 IFNA21P01568 189 aa8.91□□□□□ -0.98
HDLBP-242ENST00000488013 VSIG10L2P0DP72 767 aa8.91□□□□□ -0.98
HDLBP-242ENST00000488013 NQO2P16083 231 aa8.91□□□□□ -0.98
HDLBP-242ENST00000488013 SPNP16150 400 aa8.91□□□□□ -0.98
HDLBP-242ENST00000488013 REG1BP48304 166 aa8.91□□□□□ -0.98
HDLBP-242ENST00000488013 SUPT4H1P63272 117 aaKnown RBP8.91□□□□□ -0.98
HDLBP-242ENST00000488013 PRB3Q04118 309 aaPredicted RBP8.91□□□□□ -0.98
HDLBP-242ENST00000488013 TMEM177Q53S58 311 aa8.91□□□□□ -0.98
HDLBP-242ENST00000488013 KIAA2026Q5HYC2 2103 aa8.91□□□□□ -0.98
HDLBP-242ENST00000488013 LIN54Q6MZP7 749 aa8.91□□□□□ -0.98
HDLBP-242ENST00000488013 BRD3OSQ6XYD6 125 aa8.91□□□□□ -0.98
HDLBP-242ENST00000488013 Q6ZNX1 250 aa8.91□□□□□ -0.98
HDLBP-242ENST00000488013 DRAXINQ8NBI3 349 aaPredicted RBP8.91□□□□□ -0.98
HDLBP-242ENST00000488013 GLYATL2Q8WU03 294 aa8.91□□□□□ -0.98
HDLBP-242ENST00000488013 RBPMSQ93062 196 aaKnown RBP8.91□□□□□ -0.98
HDLBP-242ENST00000488013 RRNAD1Q96FB5 475 aaKnown RBP8.91□□□□□ -0.98
HDLBP-242ENST00000488013 C5orf30Q96GV9 206 aa8.91□□□□□ -0.98
HDLBP-242ENST00000488013 BEX2Q9BXY8 128 aa8.91□□□□□ -0.98
HDLBP-242ENST00000488013 OR51J1Q9H342 316 aa8.91□□□□□ -0.98
HDLBP-242ENST00000488013 PRDM13Q9H4Q3 707 aa8.91□□□□□ -0.98
HDLBP-242ENST00000488013 ZNRD1Q9P1U0 126 aa8.91□□□□□ -0.98
HDLBP-242ENST00000488013 TMED3Q9Y3Q3 217 aa8.91□□□□□ -0.98
HDLBP-242ENST00000488013 ABCA1O95477 2261 aa8.91□□□□□ -0.98
HDLBP-242ENST00000488013 MAP1AP78559 2803 aaPredicted RBP8.9□□□□□ -0.98
HDLBP-242ENST00000488013 A0A0U1RQK1 487 aa8.9□□□□□ -0.98
HDLBP-242ENST00000488013 FAM90A9PA6NNJ1 464 aa8.9□□□□□ -0.98
HDLBP-242ENST00000488013 M0QZK8 103 aa8.9□□□□□ -0.98
HDLBP-242ENST00000488013 SSNA1O43805 119 aa8.9□□□□□ -0.98
HDLBP-242ENST00000488013 SPDEFO95238 335 aa8.9□□□□□ -0.98
HDLBP-242ENST00000488013 FGF2P09038 288 aa8.9□□□□□ -0.98
HDLBP-242ENST00000488013 VDAC1P21796 283 aa8.9□□□□□ -0.98
HDLBP-242ENST00000488013 RPL30P62888 115 aaKnown RBP8.9□□□□□ -0.98
HDLBP-242ENST00000488013 EBI3Q14213 229 aa8.9□□□□□ -0.98
HDLBP-242ENST00000488013 TMEM187Q14656 261 aa8.9□□□□□ -0.98
HDLBP-242ENST00000488013 LRRC75BQ2VPJ9 315 aa8.9□□□□□ -0.98
HDLBP-242ENST00000488013 RUSC1-AS1Q66K80 236 aa8.9□□□□□ -0.98
HDLBP-242ENST00000488013 C12orf45Q8N5I9 185 aaPredicted RBP8.9□□□□□ -0.98
HDLBP-242ENST00000488013 CASTOR1Q8WTX7 329 aa8.9□□□□□ -0.98
HDLBP-242ENST00000488013 CAPSLQ8WWF8 208 aa8.9□□□□□ -0.98
HDLBP-242ENST00000488013 ASB13Q8WXK3 278 aa8.9□□□□□ -0.98
HDLBP-242ENST00000488013 LSM10Q969L4 123 aaKnown RBP8.9□□□□□ -0.98
HDLBP-242ENST00000488013 AJUBAQ96IF1 538 aa8.9□□□□□ -0.98
HDLBP-242ENST00000488013 TP53RKQ96S44 253 aa8.9□□□□□ -0.98
HDLBP-242ENST00000488013 SPIN2AQ99865 258 aa8.9□□□□□ -0.98
HDLBP-242ENST00000488013 SPIN2BQ9BPZ2 258 aa8.9□□□□□ -0.98
HDLBP-242ENST00000488013 ZFAND3Q9H8U3 227 aa8.9□□□□□ -0.98
HDLBP-242ENST00000488013 RAB18Q9NP72 206 aa8.9□□□□□ -0.98
HDLBP-242ENST00000488013 DOCK11Q5JSL3 2073 aa8.9□□□□□ -0.99
HDLBP-242ENST00000488013 IGHV3OR16-10A0A075B7F0 116 aa8.89□□□□□ -0.99
HDLBP-242ENST00000488013 A0A0A6YYJ9 748 aa8.89□□□□□ -0.99
HDLBP-242ENST00000488013 SHOXO15266 292 aa8.89□□□□□ -0.99
HDLBP-242ENST00000488013 VENTXO95231 258 aa8.89□□□□□ -0.99
HDLBP-242ENST00000488013 CRYZL1O95825 349 aa8.89□□□□□ -0.99
HDLBP-242ENST00000488013 LPAR6P43657 344 aa8.89□□□□□ -0.99
HDLBP-242ENST00000488013 RPS16P62249 146 aaKnown RBP8.89□□□□□ -0.99
HDLBP-242ENST00000488013 DIAPH2-AS1Q14236 149 aa8.89□□□□□ -0.99
HDLBP-242ENST00000488013 SLC9A3R2Q15599 337 aa8.89□□□□□ -0.99
HDLBP-242ENST00000488013 POU2AF1Q16633 256 aa8.89□□□□□ -0.99
HDLBP-242ENST00000488013 SP6Q3SY56 376 aa8.89□□□□□ -0.99
HDLBP-242ENST00000488013 VMA21Q3ZAQ7 101 aa8.89□□□□□ -0.99
HDLBP-242ENST00000488013 ZNF585BQ52M93 769 aa8.89□□□□□ -0.99
HDLBP-242ENST00000488013 LDLRAD2Q5SZI1 272 aa8.89□□□□□ -0.99
HDLBP-242ENST00000488013 TMEM268Q5VZI3 342 aa8.89□□□□□ -0.99
HDLBP-242ENST00000488013 C16orf82Q7Z2V1 217 aa8.89□□□□□ -0.99
HDLBP-242ENST00000488013 TMEM86BQ8N661 226 aa8.89□□□□□ -0.99
HDLBP-242ENST00000488013 OR4A5Q8NH83 315 aa8.89□□□□□ -0.99
HDLBP-242ENST00000488013 RNASE11Q8TAA1 199 aaKnown RBP8.89□□□□□ -0.99
HDLBP-242ENST00000488013 SSMEM1Q8WWF3 244 aa8.89□□□□□ -0.99
HDLBP-242ENST00000488013 CFHR4Q92496 578 aa8.89□□□□□ -0.99
HDLBP-242ENST00000488013 HARBI1Q96MB7 349 aa8.89□□□□□ -0.99
HDLBP-242ENST00000488013 MED28Q9H204 178 aa8.89□□□□□ -0.99
HDLBP-242ENST00000488013 BEX1Q9HBH7 125 aa8.89□□□□□ -0.99
HDLBP-242ENST00000488013 FLNAP21333 2647 aaKnown RBP8.88□□□□□ -0.99
HDLBP-242ENST00000488013 RAMP3O60896 148 aa8.88□□□□□ -0.99
HDLBP-242ENST00000488013 IGKV1D-33P01593 117 aa8.88□□□□□ -0.99
HDLBP-242ENST00000488013 IGKV1-33P01594 117 aa8.88□□□□□ -0.99
HDLBP-242ENST00000488013 TRAPPC2P0DI81 140 aa8.88□□□□□ -0.99
HDLBP-242ENST00000488013 TRAPPC2BP0DI82 140 aa8.88□□□□□ -0.99
HDLBP-242ENST00000488013 SLC25A6P12236 298 aa8.88□□□□□ -0.99
HDLBP-242ENST00000488013 HLA-GP17693 338 aa8.88□□□□□ -0.99
HDLBP-242ENST00000488013 SRD5A1P18405 259 aa8.88□□□□□ -0.99
HDLBP-242ENST00000488013 AKR1C2P52895 323 aa8.88□□□□□ -0.99
HDLBP-242ENST00000488013 UBE2KP61086 200 aa8.88□□□□□ -0.99
HDLBP-242ENST00000488013 CYCSP99999 105 aaKnown RBP8.88□□□□□ -0.99
HDLBP-242ENST00000488013 HES1Q14469 280 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms