RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 MRAPQ8TCY5 172 aa10.03□□□□□ -0.8
HDAC1-209ENST00000484305 HARBI1Q96MB7 349 aa10.03□□□□□ -0.8
HDAC1-209ENST00000484305 OR5B12Q96R08 314 aa10.03□□□□□ -0.8
HDAC1-209ENST00000484305 AUNIPQ9H7T9 357 aa10.03□□□□□ -0.8
HDAC1-209ENST00000484305 DIABLOQ9NR28 239 aa10.03□□□□□ -0.8
HDAC1-209ENST00000484305 FOXA2Q9Y261 457 aaPredicted RBP10.03□□□□□ -0.8
HDAC1-209ENST00000484305 TNCP24821 2201 aa10.03□□□□□ -0.8
HDAC1-209ENST00000484305 SHOXO15266 292 aa10.02□□□□□ -0.81
HDAC1-209ENST00000484305 IGLV2-14P01704 120 aa10.02□□□□□ -0.81
HDAC1-209ENST00000484305 FCER2P06734 321 aa10.02□□□□□ -0.81
HDAC1-209ENST00000484305 RRASP10301 218 aa10.02□□□□□ -0.81
HDAC1-209ENST00000484305 GNB1P62873 340 aa10.02□□□□□ -0.81
HDAC1-209ENST00000484305 EGFEM1PQ0D2K5 195 aa10.02□□□□□ -0.81
HDAC1-209ENST00000484305 CBX3Q13185 183 aa10.02□□□□□ -0.81
HDAC1-209ENST00000484305 FHL3Q13643 280 aa10.02□□□□□ -0.81
HDAC1-209ENST00000484305 FXYD3Q14802 87 aa10.02□□□□□ -0.81
HDAC1-209ENST00000484305 RTL8BQ17RB0 113 aa10.02□□□□□ -0.81
HDAC1-209ENST00000484305 ACTBL2Q562R1 376 aa10.02□□□□□ -0.81
HDAC1-209ENST00000484305 TCTEX1D1Q8N7M0 179 aa10.02□□□□□ -0.81
HDAC1-209ENST00000484305 BEST4Q8NFU0 473 aa10.02□□□□□ -0.81
HDAC1-209ENST00000484305 GRPEL2Q8TAA5 225 aa10.02□□□□□ -0.81
HDAC1-209ENST00000484305 ARPC1AQ92747 370 aa10.02□□□□□ -0.81
HDAC1-209ENST00000484305 ADTRPQ96IZ2 230 aa10.02□□□□□ -0.81
HDAC1-209ENST00000484305 MCRIP2Q9BUT9 160 aaKnown RBP10.02□□□□□ -0.81
HDAC1-209ENST00000484305 FUNDC2Q9BWH2 189 aa10.02□□□□□ -0.81
HDAC1-209ENST00000484305 VSIG4Q9Y279 399 aa10.02□□□□□ -0.81
HDAC1-209ENST00000484305 TUSC2O75896 110 aa10.01□□□□□ -0.81
HDAC1-209ENST00000484305 CRYZL1O95825 349 aa10.01□□□□□ -0.81
HDAC1-209ENST00000484305 NCS1P62166 190 aa10.01□□□□□ -0.81
HDAC1-209ENST00000484305 RPL30P62888 115 aaKnown RBP10.01□□□□□ -0.81
HDAC1-209ENST00000484305 RUNX1Q01196 453 aa10.01□□□□□ -0.81
HDAC1-209ENST00000484305 MRGPRG-AS1Q2M3A8 158 aa10.01□□□□□ -0.81
HDAC1-209ENST00000484305 UBE2NLQ5JXB2 153 aa10.01□□□□□ -0.81
HDAC1-209ENST00000484305 ASPHD1Q5U4P2 390 aa10.01□□□□□ -0.81
HDAC1-209ENST00000484305 HOGA1Q86XE5 327 aa10.01□□□□□ -0.81
HDAC1-209ENST00000484305 SAMD12Q8N8I0 201 aa10.01□□□□□ -0.81
HDAC1-209ENST00000484305 OR5M8Q8NGP6 311 aa10.01□□□□□ -0.81
HDAC1-209ENST00000484305 S100A16Q96FQ6 103 aaKnown RBP10.01□□□□□ -0.81
HDAC1-209ENST00000484305 MS4A10Q96PG2 267 aa10.01□□□□□ -0.81
HDAC1-209ENST00000484305 GPR61Q9BZJ8 451 aa10.01□□□□□ -0.81
HDAC1-209ENST00000484305 ALX4Q9H161 411 aaPredicted RBP10.01□□□□□ -0.81
HDAC1-209ENST00000484305 RBMX2Q9Y388 322 aaKnown RBP10.01□□□□□ -0.81
HDAC1-209ENST00000484305 WI2-2373I1.2A0A1W2PRP0 233 aa10□□□□□ -0.81
HDAC1-209ENST00000484305 MEIS3P1A6NDR6 274 aa10□□□□□ -0.81
HDAC1-209ENST00000484305 K7EIL1 84 aa10□□□□□ -0.81
HDAC1-209ENST00000484305 XRCC3O43542 346 aa10□□□□□ -0.81
HDAC1-209ENST00000484305 SLC22A5O76082 557 aa10□□□□□ -0.81
HDAC1-209ENST00000484305 CNIH1O95406 144 aa10□□□□□ -0.81
HDAC1-209ENST00000484305 ARPC4P59998 168 aa10□□□□□ -0.81
HDAC1-209ENST00000484305 VBP1P61758 197 aa10□□□□□ -0.81
HDAC1-209ENST00000484305 OR1N2Q8NGR9 330 aa10□□□□□ -0.81
HDAC1-209ENST00000484305 OR13F1Q8NGS4 319 aa10□□□□□ -0.81
HDAC1-209ENST00000484305 SNAPC3Q92966 411 aa10□□□□□ -0.81
HDAC1-209ENST00000484305 SLC25A46Q96AG3 418 aa10□□□□□ -0.81
HDAC1-209ENST00000484305 FCGR3BO75015 233 aa9.99□□□□□ -0.81
HDAC1-209ENST00000484305 SMIM18P0DKX4 95 aa9.99□□□□□ -0.81
HDAC1-209ENST00000484305 AADACP22760 399 aa9.99□□□□□ -0.81
HDAC1-209ENST00000484305 FCGR2CP31995 323 aa9.99□□□□□ -0.81
HDAC1-209ENST00000484305 UBE2KP61086 200 aa9.99□□□□□ -0.81
HDAC1-209ENST00000484305 ZNF616Q08AN1 781 aa9.99□□□□□ -0.81
HDAC1-209ENST00000484305 EIF4EBP1Q13541 118 aaPredicted RBP9.99□□□□□ -0.81
HDAC1-209ENST00000484305 OR2B11Q5JQS5 317 aa9.99□□□□□ -0.81
HDAC1-209ENST00000484305 PYHIN1Q6K0P9 492 aa9.99□□□□□ -0.81
HDAC1-209ENST00000484305 IDO2Q6ZQW0 420 aa9.99□□□□□ -0.81
HDAC1-209ENST00000484305 KCTD9Q7L273 389 aa9.99□□□□□ -0.81
HDAC1-209ENST00000484305 OVCH2Q7RTZ1 564 aa9.99□□□□□ -0.81
HDAC1-209ENST00000484305 TEX45Q8NA69 505 aa9.99□□□□□ -0.81
HDAC1-209ENST00000484305 OR5T1Q8NG75 326 aa9.99□□□□□ -0.81
HDAC1-209ENST00000484305 OSR1Q8TAX0 266 aaPredicted RBP9.99□□□□□ -0.81
HDAC1-209ENST00000484305 DPF1Q92782 380 aa9.99□□□□□ -0.81
HDAC1-209ENST00000484305 GPHA2Q96T91 129 aa9.99□□□□□ -0.81
HDAC1-209ENST00000484305 IGHV3-11P01762 117 aa9.98□□□□□ -0.81
HDAC1-209ENST00000484305 EIF4EP06730 217 aaKnown RBP9.98□□□□□ -0.81
HDAC1-209ENST00000484305 CBX5P45973 191 aa9.98□□□□□ -0.81
HDAC1-209ENST00000484305 BRWD1-AS2P59051 145 aa9.98□□□□□ -0.81
HDAC1-209ENST00000484305 TPPP2P59282 170 aa9.98□□□□□ -0.81
HDAC1-209ENST00000484305 PRSS8Q16651 343 aa9.98□□□□□ -0.81
HDAC1-209ENST00000484305 VMA21Q3ZAQ7 101 aa9.98□□□□□ -0.81
HDAC1-209ENST00000484305 SECTM1Q8WVN6 248 aa9.98□□□□□ -0.81
HDAC1-209ENST00000484305 TCTEX1D2Q8WW35 142 aa9.98□□□□□ -0.81
HDAC1-209ENST00000484305 HSD17B10Q99714 261 aaKnown RBP9.98□□□□□ -0.81
HDAC1-209ENST00000484305 DCUN1D5Q9BTE7 237 aa9.98□□□□□ -0.81
HDAC1-209ENST00000484305 NAA50Q9GZZ1 169 aaKnown RBP9.98□□□□□ -0.81
HDAC1-209ENST00000484305 CCL28Q9NRJ3 127 aa9.98□□□□□ -0.81
HDAC1-209ENST00000484305 TAS2R8Q9NYW2 309 aa9.98□□□□□ -0.81
HDAC1-209ENST00000484305 PRELID3BQ9Y3B1 194 aa9.98□□□□□ -0.81
HDAC1-209ENST00000484305 IGHV4OR15-8A0A075B7B6 117 aa9.97□□□□□ -0.81
HDAC1-209ENST00000484305 A0A087WW49 117 aa9.97□□□□□ -0.81
HDAC1-209ENST00000484305 MSGN1A6NI15 193 aa9.97□□□□□ -0.81
HDAC1-209ENST00000484305 SEC14L6B5MCN3 397 aa9.97□□□□□ -0.81
HDAC1-209ENST00000484305 PPYP01298 95 aa9.97□□□□□ -0.81
HDAC1-209ENST00000484305 TRGV3P03979 118 aa9.97□□□□□ -0.81
HDAC1-209ENST00000484305 LGALS1P09382 135 aaKnown RBP9.97□□□□□ -0.81
HDAC1-209ENST00000484305 OR8U8P0C7N1 319 aa9.97□□□□□ -0.81
HDAC1-209ENST00000484305 SAA1P0DJI8 122 aaPredicted RBP9.97□□□□□ -0.81
HDAC1-209ENST00000484305 APELAP0DMC3 54 aa9.97□□□□□ -0.81
HDAC1-209ENST00000484305 CD40LGP29965 261 aa9.97□□□□□ -0.81
HDAC1-209ENST00000484305 TAS2R20P59543 309 aa9.97□□□□□ -0.81
HDAC1-209ENST00000484305 TNXAQ16473 311 aa9.97□□□□□ -0.81
HDAC1-209ENST00000484305 TMEM69Q5SWH9 247 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms