RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 LINC00614P0C842 121 aa9.99□□□□□ -0.81
U2AF1-209ENST00000475639 GPR3P46089 330 aa9.99□□□□□ -0.81
U2AF1-209ENST00000475639 SELENOTP62341 195 aa9.99□□□□□ -0.81
U2AF1-209ENST00000475639 RPS4XP62701 263 aaKnown RBP9.99□□□□□ -0.81
U2AF1-209ENST00000475639 FMODQ06828 376 aa9.99□□□□□ -0.81
U2AF1-209ENST00000475639 HOGA1Q86XE5 327 aa9.99□□□□□ -0.81
U2AF1-209ENST00000475639 OR8B3Q8NGG8 313 aa9.99□□□□□ -0.81
U2AF1-209ENST00000475639 ASB5Q8WWX0 329 aa9.99□□□□□ -0.81
U2AF1-209ENST00000475639 OR8B2Q96RD0 313 aa9.99□□□□□ -0.81
U2AF1-209ENST00000475639 ALPK2Q86TB3 2170 aa9.99□□□□□ -0.81
U2AF1-209ENST00000475639 A0A087WWC5 75 aa9.98□□□□□ -0.81
U2AF1-209ENST00000475639 FAM90A27PA6NNH2 459 aa9.98□□□□□ -0.81
U2AF1-209ENST00000475639 LDLRAD4O15165 306 aa9.98□□□□□ -0.81
U2AF1-209ENST00000475639 GHRHP01286 108 aa9.98□□□□□ -0.81
U2AF1-209ENST00000475639 ZNF708P17019 499 aa9.98□□□□□ -0.81
U2AF1-209ENST00000475639 KLK2P20151 261 aa9.98□□□□□ -0.81
U2AF1-209ENST00000475639 PRDX2P32119 198 aa9.98□□□□□ -0.81
U2AF1-209ENST00000475639 CDKN2AP42771 156 aaKnown RBP9.98□□□□□ -0.81
U2AF1-209ENST00000475639 FAM53AQ6NSI3 398 aaPredicted RBP9.98□□□□□ -0.81
U2AF1-209ENST00000475639 HDHD3Q9BSH5 251 aaPredicted RBP9.98□□□□□ -0.81
U2AF1-209ENST00000475639 HLA-DRB1P01911 266 aa9.98□□□□□ -0.81
U2AF1-209ENST00000475639 IL4P05112 153 aa9.98□□□□□ -0.81
U2AF1-209ENST00000475639 SERF2P84101 59 aa9.98□□□□□ -0.81
U2AF1-209ENST00000475639 MMDQ15546 238 aa9.98□□□□□ -0.81
U2AF1-209ENST00000475639 Q6ZNB5 142 aa9.98□□□□□ -0.81
U2AF1-209ENST00000475639 GUCD1Q96NT3 240 aa9.98□□□□□ -0.81
U2AF1-209ENST00000475639 ZBP1Q9H171 429 aa9.98□□□□□ -0.81
U2AF1-209ENST00000475639 HCSTQ9UBK5 93 aa9.98□□□□□ -0.81
U2AF1-209ENST00000475639 A0A1W2PPV9 198 aa9.98□□□□□ -0.81
U2AF1-209ENST00000475639 H0YL77 283 aa9.98□□□□□ -0.81
U2AF1-209ENST00000475639 PPYP01298 95 aa9.98□□□□□ -0.81
U2AF1-209ENST00000475639 ELSPBP1Q96BH3 223 aa9.98□□□□□ -0.81
U2AF1-209ENST00000475639 SCN3AQ9NY46 2000 aa9.98□□□□□ -0.81
U2AF1-209ENST00000475639 IGKV1-8A0A0C4DH67 115 aa9.98□□□□□ -0.81
U2AF1-209ENST00000475639 LEMD1Q68G75 181 aa9.98□□□□□ -0.81
U2AF1-209ENST00000475639 TCF24Q7RTU0 167 aa9.98□□□□□ -0.81
U2AF1-209ENST00000475639 RTN4RL1Q86UN2 441 aaPredicted RBP9.98□□□□□ -0.81
U2AF1-209ENST00000475639 OR10D3Q8NH80 312 aa9.98□□□□□ -0.81
U2AF1-209ENST00000475639 PAXXQ9BUH6 204 aa9.98□□□□□ -0.81
U2AF1-209ENST00000475639 J3QR06 171 aa9.97□□□□□ -0.81
U2AF1-209ENST00000475639 WNT5AP41221 380 aa9.97□□□□□ -0.81
U2AF1-209ENST00000475639 RTP5Q14D33 572 aa9.97□□□□□ -0.81
U2AF1-209ENST00000475639 PLPPR5Q32ZL2 321 aa9.97□□□□□ -0.81
U2AF1-209ENST00000475639 WDR25Q64LD2 544 aaPredicted RBP9.97□□□□□ -0.81
U2AF1-209ENST00000475639 RTN4RL2Q86UN3 420 aa9.97□□□□□ -0.81
U2AF1-209ENST00000475639 OR10J6PQ8NGY7 276 aa9.97□□□□□ -0.81
U2AF1-209ENST00000475639 OR2W1Q9Y3N9 320 aa9.97□□□□□ -0.81
U2AF1-209ENST00000475639 MTCH2Q9Y6C9 303 aa9.97□□□□□ -0.81
U2AF1-209ENST00000475639 MYOFQ9NZM1 2061 aa9.97□□□□□ -0.81
U2AF1-209ENST00000475639 A0A1W2PS18 150 aa9.97□□□□□ -0.81
U2AF1-209ENST00000475639 OR11H12B2RN74 326 aa9.97□□□□□ -0.81
U2AF1-209ENST00000475639 ABLIM3O94929 683 aa9.97□□□□□ -0.81
U2AF1-209ENST00000475639 ERGP11308 486 aa9.97□□□□□ -0.81
U2AF1-209ENST00000475639 LOXL3P58215 753 aa9.97□□□□□ -0.81
U2AF1-209ENST00000475639 MEF2CQ06413 473 aaPredicted RBP9.97□□□□□ -0.81
U2AF1-209ENST00000475639 HIKESHIQ53FT3 197 aa9.97□□□□□ -0.81
U2AF1-209ENST00000475639 DMRTA1Q5VZB9 504 aa9.97□□□□□ -0.81
U2AF1-209ENST00000475639 H1FOOQ8IZA3 346 aaPredicted RBP9.97□□□□□ -0.81
U2AF1-209ENST00000475639 SPEM1Q8N4L4 309 aa9.97□□□□□ -0.81
U2AF1-209ENST00000475639 OR11H1Q8NG94 326 aa9.97□□□□□ -0.81
U2AF1-209ENST00000475639 OR11H2Q8NH07 326 aa9.97□□□□□ -0.81
U2AF1-209ENST00000475639 AMELYQ99218 206 aa9.97□□□□□ -0.81
U2AF1-209ENST00000475639 A0A1B0GU03 582 aa9.97□□□□□ -0.81
U2AF1-209ENST00000475639 A0A1W2PR80 420 aa9.97□□□□□ -0.81
U2AF1-209ENST00000475639 VEGFBP49765 207 aa9.97□□□□□ -0.81
U2AF1-209ENST00000475639 ZNF117Q03924 483 aa9.97□□□□□ -0.81
U2AF1-209ENST00000475639 DNAH14Q0VDD8 3507 aa9.97□□□□□ -0.81
U2AF1-209ENST00000475639 ZNF506Q5JVG8 444 aa9.97□□□□□ -0.81
U2AF1-209ENST00000475639 CCL4L1Q8NHW4 92 aa9.97□□□□□ -0.81
U2AF1-209ENST00000475639 NPVFQ9HCQ7 196 aa9.97□□□□□ -0.81
U2AF1-209ENST00000475639 TNFRSF19Q9NS68 423 aa9.97□□□□□ -0.81
U2AF1-209ENST00000475639 BEX4Q9NWD9 120 aaPredicted RBP9.97□□□□□ -0.81
U2AF1-209ENST00000475639 AURKAIP1Q9NWT8 199 aaPredicted RBP9.97□□□□□ -0.81
U2AF1-209ENST00000475639 CNOT1A5YKK6 2376 aaKnown RBP9.97□□□□□ -0.81
U2AF1-209ENST00000475639 EWSR1Q01844 656 aaKnown RBP eCLIP9.97□□□□□ -0.81
U2AF1-209ENST00000475639 TSPO2Q5TGU0 170 aa9.97□□□□□ -0.81
U2AF1-209ENST00000475639 PRNTQ86SH4 94 aa9.97□□□□□ -0.81
U2AF1-209ENST00000475639 ZNF385AQ96PM9 386 aaKnown RBP9.97□□□□□ -0.81
U2AF1-209ENST00000475639 SH3BGRL3Q9H299 93 aa9.97□□□□□ -0.81
U2AF1-209ENST00000475639 CLN8Q9UBY8 286 aa9.97□□□□□ -0.81
U2AF1-209ENST00000475639 HSPB7Q9UBY9 170 aa9.97□□□□□ -0.81
U2AF1-209ENST00000475639 C17orf51A8MQB3 221 aa9.96□□□□□ -0.81
U2AF1-209ENST00000475639 TRA2AQ13595 282 aaKnown RBP eCLIP9.96□□□□□ -0.81
U2AF1-209ENST00000475639 ZCCHC14Q8WYQ9 949 aaKnown RBP9.96□□□□□ -0.81
U2AF1-209ENST00000475639 RCC1LQ96I51 464 aaKnown RBP9.96□□□□□ -0.81
U2AF1-209ENST00000475639 MAP1LC3AQ9H492 121 aa9.96□□□□□ -0.81
U2AF1-209ENST00000475639 FOXD3Q9UJU5 478 aaPredicted RBP9.96□□□□□ -0.81
U2AF1-209ENST00000475639 GPR132Q9UNW8 380 aa9.96□□□□□ -0.81
U2AF1-209ENST00000475639 HIGD1AQ9Y241 93 aa9.96□□□□□ -0.81
U2AF1-209ENST00000475639 SYNGR1O43759 233 aa9.96□□□□□ -0.82
U2AF1-209ENST00000475639 LIPFP07098 398 aa9.96□□□□□ -0.82
U2AF1-209ENST00000475639 PNLIPP16233 465 aa9.96□□□□□ -0.82
U2AF1-209ENST00000475639 TM4SF20Q53R12 229 aa9.96□□□□□ -0.82
U2AF1-209ENST00000475639 PLA2G3Q9NZ20 509 aa9.96□□□□□ -0.82
U2AF1-209ENST00000475639 SCN2AQ99250 2005 aa9.96□□□□□ -0.82
U2AF1-209ENST00000475639 SRD5A2P31213 254 aa9.96□□□□□ -0.82
U2AF1-209ENST00000475639 GCSAMLQ5JQS6 135 aa9.96□□□□□ -0.82
U2AF1-209ENST00000475639 TMEM136Q6ZRR5 245 aa9.96□□□□□ -0.82
U2AF1-209ENST00000475639 SLC25A40Q8TBP6 338 aa9.96□□□□□ -0.82
U2AF1-209ENST00000475639 CCL28Q9NRJ3 127 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms