RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 ARPC1AQ92747 370 aa16.87■□□□□ 0.29
LIME1-203ENST00000465591 HARBI1Q96MB7 349 aa16.87■□□□□ 0.29
LIME1-203ENST00000465591 DCSTAMPQ9H295 470 aa16.87■□□□□ 0.29
LIME1-203ENST00000465591 IGKV1D-13A0A0B4J2D9 117 aa16.86■□□□□ 0.29
LIME1-203ENST00000465591 SCGNO76038 276 aa16.86■□□□□ 0.29
LIME1-203ENST00000465591 IGKV1-13P0DP09 117 aa16.86■□□□□ 0.29
LIME1-203ENST00000465591 GNG2P59768 71 aa16.86■□□□□ 0.29
LIME1-203ENST00000465591 ZNF616Q08AN1 781 aa16.86■□□□□ 0.29
LIME1-203ENST00000465591 TMEM267Q0VDI3 215 aaPredicted RBP16.86■□□□□ 0.29
LIME1-203ENST00000465591 MS4A10Q96PG2 267 aa16.86■□□□□ 0.29
LIME1-203ENST00000465591 ETV7Q9Y603 341 aa16.86■□□□□ 0.29
LIME1-203ENST00000465591 SORL1Q92673 2214 aa16.85■□□□□ 0.29
LIME1-203ENST00000465591 TRAV18A0A075B6X5 111 aa16.85■□□□□ 0.29
LIME1-203ENST00000465591 SEC14L6B5MCN3 397 aa16.85■□□□□ 0.29
LIME1-203ENST00000465591 IGLV2-14P01704 120 aa16.85■□□□□ 0.29
LIME1-203ENST00000465591 RPL5P46777 297 aaKnown RBP16.85■□□□□ 0.29
LIME1-203ENST00000465591 LGALS7P47929 136 aa16.85■□□□□ 0.29
LIME1-203ENST00000465591 SCAND1P57086 179 aa16.85■□□□□ 0.29
LIME1-203ENST00000465591 PITPNAQ00169 270 aa16.85■□□□□ 0.29
LIME1-203ENST00000465591 DEFB121Q5J5C9 76 aa16.85■□□□□ 0.29
LIME1-203ENST00000465591 OR2W1Q9Y3N9 320 aa16.85■□□□□ 0.29
LIME1-203ENST00000465591 SHOXO15266 292 aa16.84■□□□□ 0.29
LIME1-203ENST00000465591 IGHV3-11P01762 117 aa16.84■□□□□ 0.29
LIME1-203ENST00000465591 HLA-DQB1P01920 261 aa16.84■□□□□ 0.29
LIME1-203ENST00000465591 OR8U8P0C7N1 319 aa16.84■□□□□ 0.29
LIME1-203ENST00000465591 PTHLHP12272 177 aa16.84■□□□□ 0.29
LIME1-203ENST00000465591 LSM3P62310 102 aaKnown RBP16.84■□□□□ 0.29
LIME1-203ENST00000465591 DGCR2P98153 550 aa16.84■□□□□ 0.29
LIME1-203ENST00000465591 RTL8BQ17RB0 113 aa16.84■□□□□ 0.29
LIME1-203ENST00000465591 C9orf66Q5T8R8 295 aa16.84■□□□□ 0.29
LIME1-203ENST00000465591 CNIH2Q6PI25 160 aa16.84■□□□□ 0.29
LIME1-203ENST00000465591 ANKRD13BQ86YJ7 626 aa16.84■□□□□ 0.29
LIME1-203ENST00000465591 GVQW1Q8N7I0 195 aa16.84■□□□□ 0.29
LIME1-203ENST00000465591 ANXA10Q9UJ72 324 aa16.84■□□□□ 0.29
LIME1-203ENST00000465591 COL7A1Q02388 2944 aa16.84■□□□□ 0.29
LIME1-203ENST00000465591 IGHV4OR15-8A0A075B7B6 117 aa16.83■□□□□ 0.28
LIME1-203ENST00000465591 A0A087WW49 117 aa16.83■□□□□ 0.28
LIME1-203ENST00000465591 CRYZL1O95825 349 aa16.83■□□□□ 0.28
LIME1-203ENST00000465591 LGALS1P09382 135 aaKnown RBP16.83■□□□□ 0.28
LIME1-203ENST00000465591 CTXN2P0C2S0 81 aa16.83■□□□□ 0.28
LIME1-203ENST00000465591 SLURP1P55000 103 aa16.83■□□□□ 0.28
LIME1-203ENST00000465591 RPL30P62888 115 aaKnown RBP16.83■□□□□ 0.28
LIME1-203ENST00000465591 TAGLNQ01995 201 aaKnown RBP16.83■□□□□ 0.28
LIME1-203ENST00000465591 ZNF645Q8N7E2 425 aa16.83■□□□□ 0.28
LIME1-203ENST00000465591 DCUN1D4Q92564 292 aa16.83■□□□□ 0.28
LIME1-203ENST00000465591 TPPP2P59282 170 aa16.82■□□□□ 0.28
LIME1-203ENST00000465591 GPR107Q5VW38 600 aa16.82■□□□□ 0.28
LIME1-203ENST00000465591 PYHIN1Q6K0P9 492 aa16.82■□□□□ 0.28
LIME1-203ENST00000465591 IDO2Q6ZQW0 420 aa16.82■□□□□ 0.28
LIME1-203ENST00000465591 CROCCP3Q8IVE0 287 aa16.82■□□□□ 0.28
LIME1-203ENST00000465591 OR5T1Q8NG75 326 aa16.82■□□□□ 0.28
LIME1-203ENST00000465591 ADTRPQ96IZ2 230 aa16.82■□□□□ 0.28
LIME1-203ENST00000465591 SPATA2Q9UM82 520 aa16.82■□□□□ 0.28
LIME1-203ENST00000465591 RBMX2Q9Y388 322 aaKnown RBP16.82■□□□□ 0.28
LIME1-203ENST00000465591 TMEM127O75204 238 aa16.81■□□□□ 0.28
LIME1-203ENST00000465591 TUSC2O75896 110 aa16.81■□□□□ 0.28
LIME1-203ENST00000465591 CNIH1O95406 144 aa16.81■□□□□ 0.28
LIME1-203ENST00000465591 FCER2P06734 321 aa16.81■□□□□ 0.28
LIME1-203ENST00000465591 RRASP10301 218 aa16.81■□□□□ 0.28
LIME1-203ENST00000465591 RPS19P39019 145 aaKnown RBP16.81■□□□□ 0.28
LIME1-203ENST00000465591 DLX4Q92988 240 aaPredicted RBP16.81■□□□□ 0.28
LIME1-203ENST00000465591 RHOVQ96L33 236 aa16.81■□□□□ 0.28
LIME1-203ENST00000465591 PRR25Q96S07 402 aa16.81■□□□□ 0.28
LIME1-203ENST00000465591 AUNIPQ9H7T9 357 aa16.81■□□□□ 0.28
LIME1-203ENST00000465591 TRGV3P03979 118 aa16.8■□□□□ 0.28
LIME1-203ENST00000465591 UBE2KP61086 200 aa16.8■□□□□ 0.28
LIME1-203ENST00000465591 DEFA5Q01523 94 aa16.8■□□□□ 0.28
LIME1-203ENST00000465591 CBX3Q13185 183 aa16.8■□□□□ 0.28
LIME1-203ENST00000465591 EIF4EBP1Q13541 118 aaPredicted RBP16.8■□□□□ 0.28
LIME1-203ENST00000465591 OR2B11Q5JQS5 317 aa16.8■□□□□ 0.28
LIME1-203ENST00000465591 POC5Q8NA72 575 aa16.8■□□□□ 0.28
LIME1-203ENST00000465591 BEST4Q8NFU0 473 aa16.8■□□□□ 0.28
LIME1-203ENST00000465591 GPHA2Q96T91 129 aa16.8■□□□□ 0.28
LIME1-203ENST00000465591 A0A0A6YYH2 397 aa16.79■□□□□ 0.28
LIME1-203ENST00000465591 A6NJ64 397 aa16.79■□□□□ 0.28
LIME1-203ENST00000465591 LINC01619G3V211 115 aa16.79■□□□□ 0.28
LIME1-203ENST00000465591 FCGR3BO75015 233 aa16.79■□□□□ 0.28
LIME1-203ENST00000465591 GABARAPO95166 117 aa16.79■□□□□ 0.28
LIME1-203ENST00000465591 APELAP0DMC3 54 aa16.79■□□□□ 0.28
LIME1-203ENST00000465591 ECI1P42126 302 aa16.79■□□□□ 0.28
LIME1-203ENST00000465591 NCS1P62166 190 aa16.79■□□□□ 0.28
LIME1-203ENST00000465591 PRSS8Q16651 343 aa16.79■□□□□ 0.28
LIME1-203ENST00000465591 KCTD9Q7L273 389 aa16.79■□□□□ 0.28
LIME1-203ENST00000465591 HOGA1Q86XE5 327 aa16.79■□□□□ 0.28
LIME1-203ENST00000465591 TEX45Q8NA69 505 aa16.79■□□□□ 0.28
LIME1-203ENST00000465591 SLA2Q9H6Q3 261 aa16.79■□□□□ 0.28
LIME1-203ENST00000465591 OVOL1O14753 267 aa16.78■□□□□ 0.28
LIME1-203ENST00000465591 RAMP3O60896 148 aa16.78■□□□□ 0.28
LIME1-203ENST00000465591 SAA1P0DJI8 122 aaPredicted RBP16.78■□□□□ 0.28
LIME1-203ENST00000465591 BRWD1-AS2P59051 145 aa16.78■□□□□ 0.28
LIME1-203ENST00000465591 VBP1P61758 197 aa16.78■□□□□ 0.28
LIME1-203ENST00000465591 VMA21Q3ZAQ7 101 aa16.78■□□□□ 0.28
LIME1-203ENST00000465591 C11orf87Q6NUJ2 197 aa16.78■□□□□ 0.28
LIME1-203ENST00000465591 CLVS1Q8IUQ0 354 aaPredicted RBP16.78■□□□□ 0.28
LIME1-203ENST00000465591 OSR1Q8TAX0 266 aaPredicted RBP16.78■□□□□ 0.28
LIME1-203ENST00000465591 SNAPC3Q92966 411 aa16.78■□□□□ 0.28
LIME1-203ENST00000465591 ZNF355PQ9NSJ1 428 aa16.78■□□□□ 0.28
LIME1-203ENST00000465591 MEIS3P1A6NDR6 274 aa16.77■□□□□ 0.28
LIME1-203ENST00000465591 NOL3O60936 208 aaKnown RBP16.77■□□□□ 0.28
LIME1-203ENST00000465591 RBMXL2O75526 392 aaKnown RBP16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms