RNA–Protein interactions for RNA: ENST00000462322.2

SMKR1-201, Transcript of small lysine rich protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMKR1, Length 1,035 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1-201ENST00000462322 DDB2Q92466 427 aa18.69■□□□□ 0.58
SMKR1-201ENST00000462322 ARPC1AQ92747 370 aa18.69■□□□□ 0.58
SMKR1-201ENST00000462322 KCTD12Q96CX2 325 aaKnown RBP18.69■□□□□ 0.58
SMKR1-201ENST00000462322 UBE2E2Q96LR5 201 aa18.69■□□□□ 0.58
SMKR1-201ENST00000462322 TUSC2O75896 110 aa18.68■□□□□ 0.58
SMKR1-201ENST00000462322 CRYZL1O95825 349 aa18.68■□□□□ 0.58
SMKR1-201ENST00000462322 GNB1P62873 340 aa18.68■□□□□ 0.58
SMKR1-201ENST00000462322 KIAA0141Q14154 515 aaPredicted RBP18.68■□□□□ 0.58
SMKR1-201ENST00000462322 FXYD3Q14802 87 aa18.68■□□□□ 0.58
SMKR1-201ENST00000462322 TMEM69Q5SWH9 247 aa18.68■□□□□ 0.58
SMKR1-201ENST00000462322 ZNF491Q8N8L2 437 aa18.68■□□□□ 0.58
SMKR1-201ENST00000462322 GRPEL2Q8TAA5 225 aa18.68■□□□□ 0.58
SMKR1-201ENST00000462322 GPR61Q9BZJ8 451 aa18.68■□□□□ 0.58
SMKR1-201ENST00000462322 VSIG4Q9Y279 399 aa18.68■□□□□ 0.58
SMKR1-201ENST00000462322 RBMX2Q9Y388 322 aaKnown RBP18.68■□□□□ 0.58
SMKR1-201ENST00000462322 PRKDCP78527 4128 aaKnown RBP18.68■□□□□ 0.58
SMKR1-201ENST00000462322 MEIS3P1A6NDR6 274 aa18.67■□□□□ 0.58
SMKR1-201ENST00000462322 SOX15O60248 233 aa18.67■□□□□ 0.58
SMKR1-201ENST00000462322 CNIH1O95406 144 aa18.67■□□□□ 0.58
SMKR1-201ENST00000462322 CRYGBP07316 175 aa18.67■□□□□ 0.58
SMKR1-201ENST00000462322 AKIRIN2Q53H80 203 aa18.67■□□□□ 0.58
SMKR1-201ENST00000462322 ACTBL2Q562R1 376 aa18.67■□□□□ 0.58
SMKR1-201ENST00000462322 LFNGQ8NES3 379 aa18.67■□□□□ 0.58
SMKR1-201ENST00000462322 MCRIP2Q9BUT9 160 aaKnown RBP18.67■□□□□ 0.58
SMKR1-201ENST00000462322 GNB4Q9HAV0 340 aa18.67■□□□□ 0.58
SMKR1-201ENST00000462322 SRRM4A7MD48 611 aaKnown RBP18.66■□□□□ 0.58
SMKR1-201ENST00000462322 FCGR2CP31995 323 aa18.66■□□□□ 0.58
SMKR1-201ENST00000462322 TAS2R20P59543 309 aa18.66■□□□□ 0.58
SMKR1-201ENST00000462322 PJVKQ0ZLH3 352 aa18.66■□□□□ 0.58
SMKR1-201ENST00000462322 VMA21Q3ZAQ7 101 aa18.66■□□□□ 0.58
SMKR1-201ENST00000462322 KCTD9Q7L273 389 aa18.66■□□□□ 0.58
SMKR1-201ENST00000462322 CASTOR1Q8WTX7 329 aa18.66■□□□□ 0.58
SMKR1-201ENST00000462322 OR5B12Q96R08 314 aa18.66■□□□□ 0.58
SMKR1-201ENST00000462322 IFT46Q9NQC8 304 aa18.66■□□□□ 0.58
SMKR1-201ENST00000462322 COMMD3Q9UBI1 195 aa18.66■□□□□ 0.58
SMKR1-201ENST00000462322 PRELID3BQ9Y3B1 194 aa18.66■□□□□ 0.58
SMKR1-201ENST00000462322 ARPC1BO15143 372 aaKnown RBP18.65■□□□□ 0.58
SMKR1-201ENST00000462322 FCGR3BO75015 233 aa18.65■□□□□ 0.58
SMKR1-201ENST00000462322 IGLV2-14P01704 120 aa18.65■□□□□ 0.58
SMKR1-201ENST00000462322 AADACP22760 399 aa18.65■□□□□ 0.58
SMKR1-201ENST00000462322 OR11H1Q8NG94 326 aa18.65■□□□□ 0.58
SMKR1-201ENST00000462322 OR5M8Q8NGP6 311 aa18.65■□□□□ 0.58
SMKR1-201ENST00000462322 OSR1Q8TAX0 266 aaPredicted RBP18.65■□□□□ 0.58
SMKR1-201ENST00000462322 DPF1Q92782 380 aa18.65■□□□□ 0.58
SMKR1-201ENST00000462322 SNAPC3Q92966 411 aa18.65■□□□□ 0.58
SMKR1-201ENST00000462322 DCUN1D5Q9BTE7 237 aa18.65■□□□□ 0.58
SMKR1-201ENST00000462322 AURKAIP1Q9NWT8 199 aaPredicted RBP18.65■□□□□ 0.58
SMKR1-201ENST00000462322 CD40LGP29965 261 aa18.64■□□□□ 0.57
SMKR1-201ENST00000462322 RPL30P62888 115 aaKnown RBP18.64■□□□□ 0.57
SMKR1-201ENST00000462322 OR2B11Q5JQS5 317 aa18.64■□□□□ 0.57
SMKR1-201ENST00000462322 PYHIN1Q6K0P9 492 aa18.64■□□□□ 0.57
SMKR1-201ENST00000462322 ANKRD13BQ86YJ7 626 aa18.64■□□□□ 0.57
SMKR1-201ENST00000462322 OR5AP2Q8NGF4 316 aa18.64■□□□□ 0.57
SMKR1-201ENST00000462322 SECTM1Q8WVN6 248 aa18.64■□□□□ 0.57
SMKR1-201ENST00000462322 HSD17B10Q99714 261 aaKnown RBP18.64■□□□□ 0.57
SMKR1-201ENST00000462322 MRPS26Q9BYN8 205 aaKnown RBP18.64■□□□□ 0.57
SMKR1-201ENST00000462322 NAA50Q9GZZ1 169 aaKnown RBP18.64■□□□□ 0.57
SMKR1-201ENST00000462322 MRPS7Q9Y2R9 242 aaKnown RBP18.64■□□□□ 0.57
SMKR1-201ENST00000462322 I3L521 148 aa18.63■□□□□ 0.57
SMKR1-201ENST00000462322 EIF4EP06730 217 aaKnown RBP18.63■□□□□ 0.57
SMKR1-201ENST00000462322 HOXD3P31249 432 aaPredicted RBP18.63■□□□□ 0.57
SMKR1-201ENST00000462322 RORCP51449 518 aa18.63■□□□□ 0.57
SMKR1-201ENST00000462322 UBE2KP61086 200 aa18.63■□□□□ 0.57
SMKR1-201ENST00000462322 SSBP2P81877 361 aaPredicted RBP18.63■□□□□ 0.57
SMKR1-201ENST00000462322 RUNX1Q01196 453 aa18.63■□□□□ 0.57
SMKR1-201ENST00000462322 TEX45Q8NA69 505 aa18.63■□□□□ 0.57
SMKR1-201ENST00000462322 OR1N2Q8NGR9 330 aa18.63■□□□□ 0.57
SMKR1-201ENST00000462322 TCTEX1D2Q8WW35 142 aa18.63■□□□□ 0.57
SMKR1-201ENST00000462322 ACOT12Q8WYK0 555 aa18.63■□□□□ 0.57
SMKR1-201ENST00000462322 GABARAPO95166 117 aa18.62■□□□□ 0.57
SMKR1-201ENST00000462322 PPYP01298 95 aa18.62■□□□□ 0.57
SMKR1-201ENST00000462322 PRSS3P35030 304 aa18.62■□□□□ 0.57
SMKR1-201ENST00000462322 FHL3Q13643 280 aa18.62■□□□□ 0.57
SMKR1-201ENST00000462322 CDK10Q15131 360 aa18.62■□□□□ 0.57
SMKR1-201ENST00000462322 GPR107Q5VW38 600 aa18.62■□□□□ 0.57
SMKR1-201ENST00000462322 IDO2Q6ZQW0 420 aa18.62■□□□□ 0.57
SMKR1-201ENST00000462322 OVCH2Q7RTZ1 564 aa18.62■□□□□ 0.57
SMKR1-201ENST00000462322 MRAPQ8TCY5 172 aa18.62■□□□□ 0.57
SMKR1-201ENST00000462322 MS4A10Q96PG2 267 aa18.62■□□□□ 0.57
SMKR1-201ENST00000462322 CCL28Q9NRJ3 127 aa18.62■□□□□ 0.57
SMKR1-201ENST00000462322 TAS2R8Q9NYW2 309 aa18.62■□□□□ 0.57
SMKR1-201ENST00000462322 DNAH3Q8TD57 4116 aa18.61■□□□□ 0.57
SMKR1-201ENST00000462322 SMIM31A0A1B0GVY4 71 aa18.61■□□□□ 0.57
SMKR1-201ENST00000462322 APOA1P02647 267 aa18.61■□□□□ 0.57
SMKR1-201ENST00000462322 CTF1Q16619 201 aa18.61■□□□□ 0.57
SMKR1-201ENST00000462322 PRSS8Q16651 343 aa18.61■□□□□ 0.57
SMKR1-201ENST00000462322 MFSD4AQ8N468 514 aa18.61■□□□□ 0.57
SMKR1-201ENST00000462322 CMTM3Q96MX0 182 aa18.61■□□□□ 0.57
SMKR1-201ENST00000462322 ZNF355PQ9NSJ1 428 aa18.61■□□□□ 0.57
SMKR1-201ENST00000462322 TPPP2P59282 170 aa18.6■□□□□ 0.57
SMKR1-201ENST00000462322 FXYD4P59646 89 aa18.6■□□□□ 0.57
SMKR1-201ENST00000462322 KRTAP10-11P60412 298 aa18.6■□□□□ 0.57
SMKR1-201ENST00000462322 ZNF616Q08AN1 781 aa18.6■□□□□ 0.57
SMKR1-201ENST00000462322 EIF4EBP1Q13541 118 aaPredicted RBP18.6■□□□□ 0.57
SMKR1-201ENST00000462322 ZNF66Q6ZN08 573 aa18.6■□□□□ 0.57
SMKR1-201ENST00000462322 OR5T1Q8NG75 326 aa18.6■□□□□ 0.57
SMKR1-201ENST00000462322 OR4S2Q8NH73 311 aa18.6■□□□□ 0.57
SMKR1-201ENST00000462322 GIMAP1Q8WWP7 306 aa18.6■□□□□ 0.57
SMKR1-201ENST00000462322 GPHA2Q96T91 129 aa18.6■□□□□ 0.57
SMKR1-201ENST00000462322 SLC5A7Q9GZV3 580 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms