RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 ECI1P42126 302 aa15.57■□□□□ 0.08
LRCH3-208ENST00000443727 SCAND1P57086 179 aa15.57■□□□□ 0.08
LRCH3-208ENST00000443727 PJVKQ0ZLH3 352 aa15.57■□□□□ 0.08
LRCH3-208ENST00000443727 TIMM50Q3ZCQ8 353 aa15.57■□□□□ 0.08
LRCH3-208ENST00000443727 TMEM177Q53S58 311 aa15.57■□□□□ 0.08
LRCH3-208ENST00000443727 CNIH2Q6PI25 160 aa15.57■□□□□ 0.08
LRCH3-208ENST00000443727 SLA2Q9H6Q3 261 aa15.57■□□□□ 0.08
LRCH3-208ENST00000443727 VCX3AQ9NNX9 186 aa15.57■□□□□ 0.08
LRCH3-208ENST00000443727 OR2W1Q9Y3N9 320 aa15.57■□□□□ 0.08
LRCH3-208ENST00000443727 TRAV18A0A075B6X5 111 aa15.56■□□□□ 0.08
LRCH3-208ENST00000443727 LINC01619G3V211 115 aa15.56■□□□□ 0.08
LRCH3-208ENST00000443727 ARPC1BO15143 372 aaKnown RBP15.56■□□□□ 0.08
LRCH3-208ENST00000443727 CRYZL1O95825 349 aa15.56■□□□□ 0.08
LRCH3-208ENST00000443727 IGHV3-11P01762 117 aa15.56■□□□□ 0.08
LRCH3-208ENST00000443727 TRGV3P03979 118 aa15.56■□□□□ 0.08
LRCH3-208ENST00000443727 DUTP33316 252 aaKnown RBP15.56■□□□□ 0.08
LRCH3-208ENST00000443727 CD69Q07108 199 aa15.56■□□□□ 0.08
LRCH3-208ENST00000443727 VMA21Q3ZAQ7 101 aa15.56■□□□□ 0.08
LRCH3-208ENST00000443727 ASPHD1Q5U4P2 390 aa15.56■□□□□ 0.08
LRCH3-208ENST00000443727 ZNF645Q8N7E2 425 aa15.56■□□□□ 0.08
LRCH3-208ENST00000443727 OR5T1Q8NG75 326 aa15.56■□□□□ 0.08
LRCH3-208ENST00000443727 OR5H6Q8NGV6 325 aa15.56■□□□□ 0.08
LRCH3-208ENST00000443727 DCUN1D5Q9BTE7 237 aa15.56■□□□□ 0.08
LRCH3-208ENST00000443727 SSX5O60225 188 aa15.55■□□□□ 0.08
LRCH3-208ENST00000443727 TUSC2O75896 110 aa15.55■□□□□ 0.08
LRCH3-208ENST00000443727 SLC22A5O76082 557 aa15.55■□□□□ 0.08
LRCH3-208ENST00000443727 ARPC4P59998 168 aa15.55■□□□□ 0.08
LRCH3-208ENST00000443727 DCUN1D4Q92564 292 aa15.55■□□□□ 0.08
LRCH3-208ENST00000443727 SCOCQ9UIL1 159 aa15.55■□□□□ 0.08
LRCH3-208ENST00000443727 ANXA10Q9UJ72 324 aa15.55■□□□□ 0.08
LRCH3-208ENST00000443727 SRRM4A7MD48 611 aaKnown RBP15.54■□□□□ 0.08
LRCH3-208ENST00000443727 LINC00473A8K010 186 aa15.54■□□□□ 0.08
LRCH3-208ENST00000443727 OVOL1O14753 267 aa15.54■□□□□ 0.08
LRCH3-208ENST00000443727 CRYGBP07316 175 aa15.54■□□□□ 0.08
LRCH3-208ENST00000443727 INSL3P51460 131 aa15.54■□□□□ 0.08
LRCH3-208ENST00000443727 SLURP1P55000 103 aa15.54■□□□□ 0.08
LRCH3-208ENST00000443727 POC5Q8NA72 575 aa15.54■□□□□ 0.08
LRCH3-208ENST00000443727 SLC25A38Q96DW6 304 aa15.54■□□□□ 0.08
LRCH3-208ENST00000443727 PRR25Q96S07 402 aa15.54■□□□□ 0.08
LRCH3-208ENST00000443727 PHB2Q99623 299 aa15.54■□□□□ 0.08
LRCH3-208ENST00000443727 DIABLOQ9NR28 239 aa15.54■□□□□ 0.08
LRCH3-208ENST00000443727 PRELID3BQ9Y3B1 194 aa15.54■□□□□ 0.08
LRCH3-208ENST00000443727 IGHV4OR15-8A0A075B7B6 117 aa15.53■□□□□ 0.08
LRCH3-208ENST00000443727 A0A087WW49 117 aa15.53■□□□□ 0.08
LRCH3-208ENST00000443727 A0A087WXM4 84 aa15.53■□□□□ 0.08
LRCH3-208ENST00000443727 A0A0A6YYH2 397 aa15.53■□□□□ 0.08
LRCH3-208ENST00000443727 C13orf42A0A1B0GVH6 325 aa15.53■□□□□ 0.08
LRCH3-208ENST00000443727 A6NJ64 397 aa15.53■□□□□ 0.08
LRCH3-208ENST00000443727 AIREO43918 545 aa15.53■□□□□ 0.08
LRCH3-208ENST00000443727 LY86O95711 162 aa15.53■□□□□ 0.08
LRCH3-208ENST00000443727 HLA-DQB1P01920 261 aa15.53■□□□□ 0.08
LRCH3-208ENST00000443727 UBE2KP61086 200 aa15.53■□□□□ 0.08
LRCH3-208ENST00000443727 KCTD9Q7L273 389 aa15.53■□□□□ 0.08
LRCH3-208ENST00000443727 TEX45Q8NA69 505 aa15.53■□□□□ 0.08
LRCH3-208ENST00000443727 TSPAN14Q8NG11 270 aa15.53■□□□□ 0.08
LRCH3-208ENST00000443727 OSR1Q8TAX0 266 aaPredicted RBP15.53■□□□□ 0.08
LRCH3-208ENST00000443727 DDB2Q92466 427 aa15.53■□□□□ 0.08
LRCH3-208ENST00000443727 DLX4Q92988 240 aaPredicted RBP15.53■□□□□ 0.08
LRCH3-208ENST00000443727 TMEM68Q96MH6 324 aa15.53■□□□□ 0.08
LRCH3-208ENST00000443727 MRPS7Q9Y2R9 242 aaKnown RBP15.53■□□□□ 0.08
LRCH3-208ENST00000443727 H3BUA1 57 aa15.52■□□□□ 0.08
LRCH3-208ENST00000443727 FCGR3BO75015 233 aa15.52■□□□□ 0.08
LRCH3-208ENST00000443727 SAP30O75446 220 aa15.52■□□□□ 0.08
LRCH3-208ENST00000443727 TNFAIP8O95379 198 aa15.52■□□□□ 0.08
LRCH3-208ENST00000443727 HSPB1P04792 205 aaKnown RBP15.52■□□□□ 0.08
LRCH3-208ENST00000443727 TNXAQ16473 311 aa15.52■□□□□ 0.08
LRCH3-208ENST00000443727 IDO2Q6ZQW0 420 aa15.52■□□□□ 0.08
LRCH3-208ENST00000443727 ZNF429Q86V71 674 aa15.52■□□□□ 0.08
LRCH3-208ENST00000443727 CROCCP3Q8IVE0 287 aa15.52■□□□□ 0.08
LRCH3-208ENST00000443727 BEST4Q8NFU0 473 aa15.52■□□□□ 0.08
LRCH3-208ENST00000443727 ACOT12Q8WYK0 555 aa15.52■□□□□ 0.08
LRCH3-208ENST00000443727 ZNF256Q9Y2P7 627 aaPredicted RBP15.52■□□□□ 0.08
LRCH3-208ENST00000443727 RBMX2Q9Y388 322 aaKnown RBP15.52■□□□□ 0.08
LRCH3-208ENST00000443727 IGKV1D-13A0A0B4J2D9 117 aa15.51■□□□□ 0.07
LRCH3-208ENST00000443727 A0A0G2JLM5 398 aa15.51■□□□□ 0.07
LRCH3-208ENST00000443727 MPPED1O15442 326 aa15.51■□□□□ 0.07
LRCH3-208ENST00000443727 CREBL2O60519 120 aaPredicted RBP15.51■□□□□ 0.07
LRCH3-208ENST00000443727 TMEM127O75204 238 aa15.51■□□□□ 0.07
LRCH3-208ENST00000443727 ACTL6BO94805 426 aa15.51■□□□□ 0.07
LRCH3-208ENST00000443727 IGKV1-13P0DP09 117 aa15.51■□□□□ 0.07
LRCH3-208ENST00000443727 SSBP2P81877 361 aaPredicted RBP15.51■□□□□ 0.07
LRCH3-208ENST00000443727 PRSS8Q16651 343 aa15.51■□□□□ 0.07
LRCH3-208ENST00000443727 OR2B11Q5JQS5 317 aa15.51■□□□□ 0.07
LRCH3-208ENST00000443727 RHOVQ96L33 236 aa15.51■□□□□ 0.07
LRCH3-208ENST00000443727 B9D2Q9BPU9 175 aa15.51■□□□□ 0.07
LRCH3-208ENST00000443727 COA4Q9NYJ1 87 aa15.51■□□□□ 0.07
LRCH3-208ENST00000443727 SPATA2Q9UM82 520 aa15.51■□□□□ 0.07
LRCH3-208ENST00000443727 MSGN1A6NI15 193 aa15.5■□□□□ 0.07
LRCH3-208ENST00000443727 APELAP0DMC3 54 aa15.5■□□□□ 0.07
LRCH3-208ENST00000443727 TGFBR1P36897 503 aa15.5■□□□□ 0.07
LRCH3-208ENST00000443727 LSM3P62310 102 aaKnown RBP15.5■□□□□ 0.07
LRCH3-208ENST00000443727 GVQW1Q8N7I0 195 aa15.5■□□□□ 0.07
LRCH3-208ENST00000443727 TCTEX1D2Q8WW35 142 aa15.5■□□□□ 0.07
LRCH3-208ENST00000443727 HSD17B10Q99714 261 aaKnown RBP15.5■□□□□ 0.07
LRCH3-208ENST00000443727 AUNIPQ9H7T9 357 aa15.5■□□□□ 0.07
LRCH3-208ENST00000443727 FCER2P06734 321 aa15.49■□□□□ 0.07
LRCH3-208ENST00000443727 FCGR2CP31995 323 aa15.49■□□□□ 0.07
LRCH3-208ENST00000443727 HOGA1Q86XE5 327 aa15.49■□□□□ 0.07
LRCH3-208ENST00000443727 S100A16Q96FQ6 103 aaKnown RBP15.49■□□□□ 0.07
LRCH3-208ENST00000443727 TAS2R8Q9NYW2 309 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms