RNA–Protein interactions for RNA: ENST00000441756.1

MCF2L-217, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 370 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-217ENST00000441756 LSM10Q969L4 123 aaKnown RBP12.88□□□□□ -0.35
MCF2L-217ENST00000441756 MALSU1Q96EH3 234 aa12.88□□□□□ -0.35
MCF2L-217ENST00000441756 PRRC2AP48634 2157 aaKnown RBP12.88□□□□□ -0.35
MCF2L-217ENST00000441756 ABCA2Q9BZC7 2435 aa12.88□□□□□ -0.35
MCF2L-217ENST00000441756 C13orf42A0A1B0GVH6 325 aa12.87□□□□□ -0.35
MCF2L-217ENST00000441756 A0A1W2PRD5 423 aa12.87□□□□□ -0.35
MCF2L-217ENST00000441756 A0A1W2PRF3 423 aa12.87□□□□□ -0.35
MCF2L-217ENST00000441756 A0A1W2PRM7 423 aa12.87□□□□□ -0.35
MCF2L-217ENST00000441756 RAMP3O60896 148 aa12.87□□□□□ -0.35
MCF2L-217ENST00000441756 ADAP1O75689 374 aa12.87□□□□□ -0.35
MCF2L-217ENST00000441756 S1PR2O95136 353 aa12.87□□□□□ -0.35
MCF2L-217ENST00000441756 CRYZL1O95825 349 aa12.87□□□□□ -0.35
MCF2L-217ENST00000441756 NQO2P16083 231 aa12.87□□□□□ -0.35
MCF2L-217ENST00000441756 RAP2BP61225 183 aa12.87□□□□□ -0.35
MCF2L-217ENST00000441756 CD83Q01151 205 aa12.87□□□□□ -0.35
MCF2L-217ENST00000441756 GGNBP1Q5YKI7 109 aa12.87□□□□□ -0.35
MCF2L-217ENST00000441756 LYZL2Q7Z4W2 148 aa12.87□□□□□ -0.35
MCF2L-217ENST00000441756 MOB3BQ86TA1 216 aa12.87□□□□□ -0.35
MCF2L-217ENST00000441756 OSR1Q8TAX0 266 aaPredicted RBP12.87□□□□□ -0.35
MCF2L-217ENST00000441756 R3HDM4Q96D70 268 aa12.87□□□□□ -0.35
MCF2L-217ENST00000441756 ARHGAP32A7KAX9 2087 aa12.87□□□□□ -0.35
MCF2L-217ENST00000441756 CR1P17927 2039 aa12.86□□□□□ -0.35
MCF2L-217ENST00000441756 A0A1W2PPI3 338 aa12.86□□□□□ -0.35
MCF2L-217ENST00000441756 A8MV72 311 aaPredicted RBP12.86□□□□□ -0.35
MCF2L-217ENST00000441756 CCSO14618 274 aa12.86□□□□□ -0.35
MCF2L-217ENST00000441756 SMAD7O15105 426 aaKnown RBP12.86□□□□□ -0.35
MCF2L-217ENST00000441756 SLC25A6P12236 298 aa12.86□□□□□ -0.35
MCF2L-217ENST00000441756 CXCL3P19876 107 aa12.86□□□□□ -0.35
MCF2L-217ENST00000441756 DIAPH2-AS1Q14236 149 aa12.86□□□□□ -0.35
MCF2L-217ENST00000441756 LHFPL4Q7Z7J7 247 aa12.86□□□□□ -0.35
MCF2L-217ENST00000441756 OR4C13Q8NGP0 309 aa12.86□□□□□ -0.35
MCF2L-217ENST00000441756 PPP1R14BQ96C90 147 aa12.86□□□□□ -0.35
MCF2L-217ENST00000441756 FLYWCH2Q96CP2 140 aaKnown RBP12.86□□□□□ -0.35
MCF2L-217ENST00000441756 C2orf50Q96LR7 162 aa12.86□□□□□ -0.35
MCF2L-217ENST00000441756 HILPDAQ9Y5L2 63 aa12.86□□□□□ -0.35
MCF2L-217ENST00000441756 MMP24Q9Y5R2 645 aa12.86□□□□□ -0.35
MCF2L-217ENST00000441756 A0A1B0GU03 582 aa12.85□□□□□ -0.35
MCF2L-217ENST00000441756 MARCH11A6NNE9 402 aa12.85□□□□□ -0.35
MCF2L-217ENST00000441756 SHOXO15266 292 aa12.85□□□□□ -0.35
MCF2L-217ENST00000441756 OR2A4O95047 310 aa12.85□□□□□ -0.35
MCF2L-217ENST00000441756 IGKV1-39P01597 117 aa12.85□□□□□ -0.35
MCF2L-217ENST00000441756 IGKV1D-39P04432 117 aa12.85□□□□□ -0.35
MCF2L-217ENST00000441756 CD1BP29016 333 aa12.85□□□□□ -0.35
MCF2L-217ENST00000441756 BRS3P32247 399 aa12.85□□□□□ -0.35
MCF2L-217ENST00000441756 BRWD1-AS2P59051 145 aa12.85□□□□□ -0.35
MCF2L-217ENST00000441756 SSX2Q16385 188 aa12.85□□□□□ -0.35
MCF2L-217ENST00000441756 IAH1Q2TAA2 248 aaPredicted RBP12.85□□□□□ -0.35
MCF2L-217ENST00000441756 TMEM177Q53S58 311 aa12.85□□□□□ -0.35
MCF2L-217ENST00000441756 NMSQ5H8A3 153 aa12.85□□□□□ -0.35
MCF2L-217ENST00000441756 H2BFWTQ7Z2G1 175 aa12.85□□□□□ -0.35
MCF2L-217ENST00000441756 TCTE3Q8IZS6 198 aa12.85□□□□□ -0.35
MCF2L-217ENST00000441756 DMBX1Q8NFW5 382 aa12.85□□□□□ -0.35
MCF2L-217ENST00000441756 OR2A7Q96R45 310 aa12.85□□□□□ -0.35
MCF2L-217ENST00000441756 NEURL2Q9BR09 285 aa12.85□□□□□ -0.35
MCF2L-217ENST00000441756 CHIAQ9BZP6 476 aa12.85□□□□□ -0.35
MCF2L-217ENST00000441756 NMES1Q9C002 83 aa12.85□□□□□ -0.35
MCF2L-217ENST00000441756 RANBP3Q9H6Z4 567 aaPredicted RBP12.85□□□□□ -0.35
MCF2L-217ENST00000441756 FAM90A9PA6NNJ1 464 aa12.84□□□□□ -0.35
MCF2L-217ENST00000441756 TIMM23O14925 209 aa12.84□□□□□ -0.35
MCF2L-217ENST00000441756 SIX6O95475 246 aa12.84□□□□□ -0.35
MCF2L-217ENST00000441756 KRASP01116 189 aa12.84□□□□□ -0.35
MCF2L-217ENST00000441756 LGALS7P47929 136 aa12.84□□□□□ -0.35
MCF2L-217ENST00000441756 H2BFSP57053 126 aa12.84□□□□□ -0.35
MCF2L-217ENST00000441756 LINC00205P59089 165 aa12.84□□□□□ -0.35
MCF2L-217ENST00000441756 SRSF4Q08170 494 aaKnown RBP12.84□□□□□ -0.35
MCF2L-217ENST00000441756 FGL1Q08830 312 aa12.84□□□□□ -0.35
MCF2L-217ENST00000441756 HABP2Q14520 560 aaPredicted RBP12.84□□□□□ -0.35
MCF2L-217ENST00000441756 POU2AF1Q16633 256 aa12.84□□□□□ -0.35
MCF2L-217ENST00000441756 C2orf68Q2NKX9 166 aa12.84□□□□□ -0.35
MCF2L-217ENST00000441756 CIARTQ8N365 385 aaPredicted RBP12.84□□□□□ -0.35
MCF2L-217ENST00000441756 VSTM2AQ8TAG5 236 aa12.84□□□□□ -0.35
MCF2L-217ENST00000441756 NANPQ8TBE9 248 aa12.84□□□□□ -0.35
MCF2L-217ENST00000441756 SEC22AQ96IW7 307 aa12.84□□□□□ -0.35
MCF2L-217ENST00000441756 ST6GAL2Q96JF0 529 aa12.84□□□□□ -0.35
MCF2L-217ENST00000441756 HARBI1Q96MB7 349 aa12.84□□□□□ -0.35
MCF2L-217ENST00000441756 RNF5Q99942 180 aa12.84□□□□□ -0.35
MCF2L-217ENST00000441756 MS4A7Q9GZW8 240 aaPredicted RBP12.84□□□□□ -0.35
MCF2L-217ENST00000441756 RANGRFQ9HD47 186 aaPredicted RBP12.84□□□□□ -0.35
MCF2L-217ENST00000441756 ZFP57Q9NU63 452 aa12.84□□□□□ -0.35
MCF2L-217ENST00000441756 CACFD1Q9UGQ2 172 aa12.84□□□□□ -0.35
MCF2L-217ENST00000441756 FAM96BQ9Y3D0 163 aa12.84□□□□□ -0.35
MCF2L-217ENST00000441756 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.83□□□□□ -0.36
MCF2L-217ENST00000441756 CD5LO43866 347 aa12.83□□□□□ -0.36
MCF2L-217ENST00000441756 IGKV1-5P01602 117 aa12.83□□□□□ -0.36
MCF2L-217ENST00000441756 PET100P0DJ07 73 aa12.83□□□□□ -0.36
MCF2L-217ENST00000441756 G6PCP35575 357 aa12.83□□□□□ -0.36
MCF2L-217ENST00000441756 RPS16P62249 146 aaKnown RBP12.83□□□□□ -0.36
MCF2L-217ENST00000441756 SMCO1Q147U7 214 aa12.83□□□□□ -0.36
MCF2L-217ENST00000441756 ZBTB8BQ8NAP8 495 aaPredicted RBP12.83□□□□□ -0.36
MCF2L-217ENST00000441756 RHOVQ96L33 236 aa12.83□□□□□ -0.36
MCF2L-217ENST00000441756 TSNAXQ99598 290 aaKnown RBP12.83□□□□□ -0.36
MCF2L-217ENST00000441756 COA4Q9NYJ1 87 aa12.83□□□□□ -0.36
MCF2L-217ENST00000441756 VENTXO95231 258 aa12.82□□□□□ -0.36
MCF2L-217ENST00000441756 IGKV1-16P04430 117 aa12.82□□□□□ -0.36
MCF2L-217ENST00000441756 FBP1P09467 338 aa12.82□□□□□ -0.36
MCF2L-217ENST00000441756 IGHV4-38-2P0DP08 117 aa12.82□□□□□ -0.36
MCF2L-217ENST00000441756 VMA21Q3ZAQ7 101 aa12.82□□□□□ -0.36
MCF2L-217ENST00000441756 LDLRAD2Q5SZI1 272 aa12.82□□□□□ -0.36
MCF2L-217ENST00000441756 PIP4P2Q8N4L2 257 aa12.82□□□□□ -0.36
MCF2L-217ENST00000441756 OR1S1Q8NH92 325 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms