RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, human

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-208	ENST00000436638	MRPS28	Q9Y2Q9	187 aa	Known RBP	5.12	□□□□□ -1.59
ECHDC1-208	ENST00000436638	ARFGEF3	Q5TH69	2177 aa		5.12	□□□□□ -1.59
ECHDC1-208	ENST00000436638	VWC2L	B2RUY7	222 aa		5.11	□□□□□ -1.59
ECHDC1-208	ENST00000436638	DNASE2	O00115	360 aa	Predicted RBP	5.11	□□□□□ -1.59
ECHDC1-208	ENST00000436638	SH2D1B	O14796	132 aa		5.11	□□□□□ -1.59
ECHDC1-208	ENST00000436638	WNT9B	O14905	357 aa		5.11	□□□□□ -1.59
ECHDC1-208	ENST00000436638	NDUFB3	O43676	98 aa		5.11	□□□□□ -1.59
ECHDC1-208	ENST00000436638	OR2J3	O76001	311 aa		5.11	□□□□□ -1.59
ECHDC1-208	ENST00000436638	CDRT1	O95170	752 aa		5.11	□□□□□ -1.59
ECHDC1-208	ENST00000436638	FSTL3	O95633	263 aa		5.11	□□□□□ -1.59
ECHDC1-208	ENST00000436638	LHB	P01229	141 aa		5.11	□□□□□ -1.59
ECHDC1-208	ENST00000436638	SPP1	P10451	314 aa		5.11	□□□□□ -1.59
ECHDC1-208	ENST00000436638	BCL3	P20749	454 aa		5.11	□□□□□ -1.59
ECHDC1-208	ENST00000436638	FGF12	P61328	243 aa		5.11	□□□□□ -1.59
ECHDC1-208	ENST00000436638	GNB2	P62879	340 aa		5.11	□□□□□ -1.59
ECHDC1-208	ENST00000436638	RPL32	P62910	135 aa	Known RBP	5.11	□□□□□ -1.59
ECHDC1-208	ENST00000436638	MXD1	Q05195	221 aa		5.11	□□□□□ -1.59
ECHDC1-208	ENST00000436638	LOXL1	Q08397	574 aa	Predicted RBP	5.11	□□□□□ -1.59
ECHDC1-208	ENST00000436638	KIAA0141	Q14154	515 aa	Predicted RBP	5.11	□□□□□ -1.59
ECHDC1-208	ENST00000436638	TAF9	Q16594	264 aa		5.11	□□□□□ -1.59
ECHDC1-208	ENST00000436638	ZNF404	Q494X3	552 aa		5.11	□□□□□ -1.59
ECHDC1-208	ENST00000436638	C1orf100	Q5SVJ3	147 aa		5.11	□□□□□ -1.59
ECHDC1-208	ENST00000436638	TEX36	Q5VZQ5	186 aa		5.11	□□□□□ -1.59
ECHDC1-208	ENST00000436638	CCDC144NL	Q6NUI1	221 aa		5.11	□□□□□ -1.59
ECHDC1-208	ENST00000436638	DNM1P46	Q6ZS02	220 aa		5.11	□□□□□ -1.59
ECHDC1-208	ENST00000436638	IL17REL	Q6ZVW7	336 aa		5.11	□□□□□ -1.59
ECHDC1-208	ENST00000436638	OSR2	Q8N2R0	312 aa		5.11	□□□□□ -1.59
ECHDC1-208	ENST00000436638	OR4M2	Q8NGB6	313 aa		5.11	□□□□□ -1.59
ECHDC1-208	ENST00000436638	OR6F1	Q8NGZ6	308 aa		5.11	□□□□□ -1.59
ECHDC1-208	ENST00000436638	CLDND2	Q8NHS1	167 aa		5.11	□□□□□ -1.59
ECHDC1-208	ENST00000436638	WWC2-AS2	Q96NR7	200 aa		5.11	□□□□□ -1.59
ECHDC1-208	ENST00000436638	NKX3-1	Q99801	234 aa	Predicted RBP	5.11	□□□□□ -1.59
ECHDC1-208	ENST00000436638	NRIP2	Q9BQI9	281 aa		5.11	□□□□□ -1.59
ECHDC1-208	ENST00000436638	KRTAP3-1	Q9BYR8	98 aa		5.11	□□□□□ -1.59
ECHDC1-208	ENST00000436638	CTDSP1	Q9GZU7	261 aa		5.11	□□□□□ -1.59
ECHDC1-208	ENST00000436638	CST11	Q9H112	138 aa		5.11	□□□□□ -1.59
ECHDC1-208	ENST00000436638	WDR13	Q9H1Z4	485 aa		5.11	□□□□□ -1.59
ECHDC1-208	ENST00000436638	PATZ1	Q9HBE1	687 aa	Known RBP	5.11	□□□□□ -1.59
ECHDC1-208	ENST00000436638	BEX1	Q9HBH7	125 aa		5.11	□□□□□ -1.59
ECHDC1-208	ENST00000436638	RANGRF	Q9HD47	186 aa	Predicted RBP	5.11	□□□□□ -1.59
ECHDC1-208	ENST00000436638	RBFOX1	Q9NWB1	397 aa	Known RBP	5.11	□□□□□ -1.59
ECHDC1-208	ENST00000436638	PIPOX	Q9P0Z9	390 aa		5.11	□□□□□ -1.59
ECHDC1-208	ENST00000436638	PEMT	Q9UBM1	199 aa		5.11	□□□□□ -1.59
ECHDC1-208	ENST00000436638	HELZ2	Q9BYK8	2649 aa	Known RBP	5.11	□□□□□ -1.59
ECHDC1-208	ENST00000436638	DYSF	O75923	2080 aa		5.11	□□□□□ -1.59
ECHDC1-208	ENST00000436638	ROS1	P08922	2347 aa		5.11	□□□□□ -1.59
ECHDC1-208	ENST00000436638	PLCE1	Q9P212	2302 aa		5.11	□□□□□ -1.59
ECHDC1-208	ENST00000436638	LRRK2	Q5S007	2527 aa		5.11	□□□□□ -1.59
ECHDC1-208	ENST00000436638		A0A087WWL8	130 aa		5.1	□□□□□ -1.59
ECHDC1-208	ENST00000436638	IGHV4-61	A0A0C4DH41	118 aa		5.1	□□□□□ -1.59
ECHDC1-208	ENST00000436638	IGKV1-12	A0A0C4DH73	117 aa		5.1	□□□□□ -1.59
ECHDC1-208	ENST00000436638	KBTBD11-OT1	A0A1B0GTJ5	212 aa		5.1	□□□□□ -1.59
ECHDC1-208	ENST00000436638	IFITM5	A6NNB3	132 aa		5.1	□□□□□ -1.59
ECHDC1-208	ENST00000436638	CEACAM18	A8MTB9	384 aa		5.1	□□□□□ -1.59
ECHDC1-208	ENST00000436638	USP9Y	O00507	2555 aa	Predicted RBP	5.1	□□□□□ -1.59
ECHDC1-208	ENST00000436638	SLC17A2	O00624	439 aa		5.1	□□□□□ -1.59
ECHDC1-208	ENST00000436638	DEGS1	O15121	323 aa		5.1	□□□□□ -1.59
ECHDC1-208	ENST00000436638	FOXH1	O75593	365 aa		5.1	□□□□□ -1.59
ECHDC1-208	ENST00000436638	S1PR2	O95136	353 aa		5.1	□□□□□ -1.59
ECHDC1-208	ENST00000436638	TMEM50A	O95807	157 aa		5.1	□□□□□ -1.59
ECHDC1-208	ENST00000436638	HAND1	O96004	215 aa		5.1	□□□□□ -1.59
ECHDC1-208	ENST00000436638	IGKV1D-12	P01611	117 aa		5.1	□□□□□ -1.59
ECHDC1-208	ENST00000436638	ORM1	P02763	201 aa		5.1	□□□□□ -1.59
ECHDC1-208	ENST00000436638	WNT2	P09544	360 aa		5.1	□□□□□ -1.59
ECHDC1-208	ENST00000436638	PSG2	P11465	335 aa		5.1	□□□□□ -1.59
ECHDC1-208	ENST00000436638	FOLR2	P14207	255 aa		5.1	□□□□□ -1.59
ECHDC1-208	ENST00000436638	CD99	P14209	185 aa		5.1	□□□□□ -1.59
ECHDC1-208	ENST00000436638	ARSB	P15848	533 aa		5.1	□□□□□ -1.59
ECHDC1-208	ENST00000436638	OMG	P23515	440 aa		5.1	□□□□□ -1.59
ECHDC1-208	ENST00000436638	SDC2	P34741	201 aa		5.1	□□□□□ -1.59
ECHDC1-208	ENST00000436638	RBMX	P38159	391 aa	Known RBP	5.1	□□□□□ -1.59
ECHDC1-208	ENST00000436638	GZMK	P49863	264 aa		5.1	□□□□□ -1.59
ECHDC1-208	ENST00000436638	CAV2	P51636	162 aa		5.1	□□□□□ -1.59
ECHDC1-208	ENST00000436638	OR10A3	P58181	314 aa		5.1	□□□□□ -1.59
ECHDC1-208	ENST00000436638	RRAS2	P62070	204 aa	Predicted RBP	5.1	□□□□□ -1.59
ECHDC1-208	ENST00000436638	FOXE3	Q13461	319 aa		5.1	□□□□□ -1.59
ECHDC1-208	ENST00000436638	IL13RA2	Q14627	380 aa		5.1	□□□□□ -1.59
ECHDC1-208	ENST00000436638	LRRC10	Q5BKY1	277 aa		5.1	□□□□□ -1.59
ECHDC1-208	ENST00000436638	LCE5A	Q5TCM9	118 aa		5.1	□□□□□ -1.59
ECHDC1-208	ENST00000436638	USF3	Q68DE3	2245 aa		5.1	□□□□□ -1.59
ECHDC1-208	ENST00000436638	STUM	Q69YW2	141 aa		5.1	□□□□□ -1.59
ECHDC1-208	ENST00000436638	H2BFWT	Q7Z2G1	175 aa		5.1	□□□□□ -1.59
ECHDC1-208	ENST00000436638	RNF144B	Q7Z419	303 aa		5.1	□□□□□ -1.59
ECHDC1-208	ENST00000436638	LFNG	Q8NES3	379 aa		5.1	□□□□□ -1.59
ECHDC1-208	ENST00000436638	OR5AN1	Q8NGI8	311 aa		5.1	□□□□□ -1.59
ECHDC1-208	ENST00000436638	OR4S2	Q8NH73	311 aa		5.1	□□□□□ -1.59
ECHDC1-208	ENST00000436638	RNASEH2C	Q8TDP1	164 aa	Known RBP	5.1	□□□□□ -1.59
ECHDC1-208	ENST00000436638	RAB2B	Q8WUD1	216 aa		5.1	□□□□□ -1.59
ECHDC1-208	ENST00000436638	CCDC107	Q8WV48	283 aa		5.1	□□□□□ -1.59
ECHDC1-208	ENST00000436638	SEH1L	Q96EE3	360 aa		5.1	□□□□□ -1.59
ECHDC1-208	ENST00000436638	MRPS24	Q96EL2	167 aa	Known RBP	5.1	□□□□□ -1.59
ECHDC1-208	ENST00000436638	CCL13	Q99616	98 aa		5.1	□□□□□ -1.59
ECHDC1-208	ENST00000436638	URM1	Q9BTM9	101 aa	Known RBP	5.1	□□□□□ -1.59
ECHDC1-208	ENST00000436638	MS4A7	Q9GZW8	240 aa	Predicted RBP	5.1	□□□□□ -1.59
ECHDC1-208	ENST00000436638	RNF167	Q9H6Y7	350 aa		5.1	□□□□□ -1.59
ECHDC1-208	ENST00000436638	HES4	Q9HCC6	221 aa		5.1	□□□□□ -1.59
ECHDC1-208	ENST00000436638	IL36G	Q9NZH8	169 aa		5.1	□□□□□ -1.59
ECHDC1-208	ENST00000436638	CLN8	Q9UBY8	286 aa		5.1	□□□□□ -1.59
ECHDC1-208	ENST00000436638	OR5V1	Q9UGF6	321 aa		5.1	□□□□□ -1.59
ECHDC1-208	ENST00000436638	STEAP1	Q9UHE8	339 aa		5.1	□□□□□ -1.59

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