RNA–Protein interactions for RNA: ENST00000430038.5

CPSF4-203, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 735 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-203ENST00000430038 LGALS7P47929 136 aa13.07□□□□□ -0.32
CPSF4-203ENST00000430038 HARBI1Q96MB7 349 aa13.07□□□□□ -0.32
CPSF4-203ENST00000430038 STARD9Q9P2P6 4700 aa13.07□□□□□ -0.32
CPSF4-203ENST00000430038 CNIH1O95406 144 aa13.06□□□□□ -0.32
CPSF4-203ENST00000430038 IGLV1-51P01701 117 aa13.06□□□□□ -0.32
CPSF4-203ENST00000430038 IGLV2-14P01704 120 aa13.06□□□□□ -0.32
CPSF4-203ENST00000430038 DYRK1AQ13627 763 aa13.06□□□□□ -0.32
CPSF4-203ENST00000430038 KLF5Q13887 457 aaPredicted RBP13.06□□□□□ -0.32
CPSF4-203ENST00000430038 CDNFQ49AH0 187 aa13.06□□□□□ -0.32
CPSF4-203ENST00000430038 Q6ZS49 121 aa13.06□□□□□ -0.32
CPSF4-203ENST00000430038 ATG5Q9H1Y0 275 aa13.06□□□□□ -0.32
CPSF4-203ENST00000430038 SACSQ9NZJ4 4579 aa13.06□□□□□ -0.32
CPSF4-203ENST00000430038 MSGN1A6NI15 193 aa13.05□□□□□ -0.32
CPSF4-203ENST00000430038 SHOXO15266 292 aa13.05□□□□□ -0.32
CPSF4-203ENST00000430038 DIRAS3O95661 229 aa13.05□□□□□ -0.32
CPSF4-203ENST00000430038 RPL30P62888 115 aaKnown RBP13.05□□□□□ -0.32
CPSF4-203ENST00000430038 PITPNAQ00169 270 aa13.05□□□□□ -0.32
CPSF4-203ENST00000430038 SRSF7Q16629 238 aaKnown RBP eCLIP13.05□□□□□ -0.32
CPSF4-203ENST00000430038 UBE2UQ5VVX9 321 aa13.05□□□□□ -0.32
CPSF4-203ENST00000430038 SPARTQ8N0X7 666 aa13.05□□□□□ -0.32
CPSF4-203ENST00000430038 TINAGL1Q9GZM7 467 aaPredicted RBP13.05□□□□□ -0.32
CPSF4-203ENST00000430038 TXNL4BQ9NX01 149 aaKnown RBP13.05□□□□□ -0.32
CPSF4-203ENST00000430038 IGKV1D-13A0A0B4J2D9 117 aa13.04□□□□□ -0.32
CPSF4-203ENST00000430038 H3BUA1 57 aa13.04□□□□□ -0.32
CPSF4-203ENST00000430038 SSX5O60225 188 aa13.04□□□□□ -0.32
CPSF4-203ENST00000430038 CRYZL1O95825 349 aa13.04□□□□□ -0.32
CPSF4-203ENST00000430038 PRH1P02810 166 aa13.04□□□□□ -0.32
CPSF4-203ENST00000430038 IGKV1-13P0DP09 117 aa13.04□□□□□ -0.32
CPSF4-203ENST00000430038 GADD45AP24522 165 aa13.04□□□□□ -0.32
CPSF4-203ENST00000430038 BRWD1-AS2P59051 145 aa13.04□□□□□ -0.32
CPSF4-203ENST00000430038 MRPS15P82914 257 aaKnown RBP13.04□□□□□ -0.32
CPSF4-203ENST00000430038 TAGLNQ01995 201 aaKnown RBP13.04□□□□□ -0.32
CPSF4-203ENST00000430038 ARFRP1Q13795 201 aa13.04□□□□□ -0.32
CPSF4-203ENST00000430038 PRSS8Q16651 343 aa13.04□□□□□ -0.32
CPSF4-203ENST00000430038 ZNF343Q6P1L6 599 aa13.04□□□□□ -0.32
CPSF4-203ENST00000430038 ADAD2Q8NCV1 583 aaKnown RBP13.04□□□□□ -0.32
CPSF4-203ENST00000430038 OR6Q1Q8NGQ2 317 aa13.04□□□□□ -0.32
CPSF4-203ENST00000430038 RCHY1Q96PM5 261 aa13.04□□□□□ -0.32
CPSF4-203ENST00000430038 OR4C12Q96R67 309 aa13.04□□□□□ -0.32
CPSF4-203ENST00000430038 ST6GALNAC5Q9BVH7 336 aa13.04□□□□□ -0.32
CPSF4-203ENST00000430038 RNF167Q9H6Y7 350 aa13.04□□□□□ -0.32
CPSF4-203ENST00000430038 RANGRFQ9HD47 186 aaPredicted RBP13.04□□□□□ -0.32
CPSF4-203ENST00000430038 RAB26Q9ULW5 256 aa13.04□□□□□ -0.32
CPSF4-203ENST00000430038 LYSTQ99698 3801 aa13.04□□□□□ -0.32
CPSF4-203ENST00000430038 C13orf42A0A1B0GVH6 325 aa13.03□□□□□ -0.32
CPSF4-203ENST00000430038 BRI3O95415 125 aa13.03□□□□□ -0.32
CPSF4-203ENST00000430038 CLEC2LP0C7M8 214 aa13.03□□□□□ -0.32
CPSF4-203ENST00000430038 GALP22466 123 aa13.03□□□□□ -0.32
CPSF4-203ENST00000430038 NFYAP23511 347 aaPredicted RBP13.03□□□□□ -0.32
CPSF4-203ENST00000430038 MYL9P24844 172 aa13.03□□□□□ -0.32
CPSF4-203ENST00000430038 HSPA13P48723 471 aa13.03□□□□□ -0.32
CPSF4-203ENST00000430038 SYNJ2BPP57105 145 aa13.03□□□□□ -0.32
CPSF4-203ENST00000430038 ZNF45Q02386 682 aa13.03□□□□□ -0.32
CPSF4-203ENST00000430038 C10orf55Q5SWW7 151 aa13.03□□□□□ -0.32
CPSF4-203ENST00000430038 C19orf35Q6ZS72 473 aa13.03□□□□□ -0.32
CPSF4-203ENST00000430038 NUDCD2Q8WVJ2 157 aa13.03□□□□□ -0.32
CPSF4-203ENST00000430038 GPHA2Q96T91 129 aa13.03□□□□□ -0.32
CPSF4-203ENST00000430038 GINS4Q9BRT9 223 aa13.03□□□□□ -0.32
CPSF4-203ENST00000430038 IZUMO1RA6ND01 250 aa13.02□□□□□ -0.33
CPSF4-203ENST00000430038 METTL21EPA6NDL7 271 aa13.02□□□□□ -0.33
CPSF4-203ENST00000430038 ERICH4A6NGS2 130 aa13.02□□□□□ -0.33
CPSF4-203ENST00000430038 E7EUB6 86 aa13.02□□□□□ -0.33
CPSF4-203ENST00000430038 CSN3P07498 182 aa13.02□□□□□ -0.33
CPSF4-203ENST00000430038 CD40LGP29965 261 aa13.02□□□□□ -0.33
CPSF4-203ENST00000430038 FGF9P31371 208 aaPredicted RBP13.02□□□□□ -0.33
CPSF4-203ENST00000430038 GABARAPL2P60520 117 aa13.02□□□□□ -0.33
CPSF4-203ENST00000430038 UBE2KP61086 200 aa13.02□□□□□ -0.33
CPSF4-203ENST00000430038 EIF4EBP1Q13541 118 aaPredicted RBP13.02□□□□□ -0.33
CPSF4-203ENST00000430038 TNXAQ16473 311 aa13.02□□□□□ -0.33
CPSF4-203ENST00000430038 HACD4Q5VWC8 232 aa13.02□□□□□ -0.33
CPSF4-203ENST00000430038 ADAMTSL5Q6ZMM2 481 aa13.02□□□□□ -0.33
CPSF4-203ENST00000430038 TEX45Q8NA69 505 aa13.02□□□□□ -0.33
CPSF4-203ENST00000430038 RSRP1Q9BUV0 290 aa13.02□□□□□ -0.33
CPSF4-203ENST00000430038 OR51E2Q9H255 320 aa13.02□□□□□ -0.33
CPSF4-203ENST00000430038 VCX3BQ9H321 246 aa13.02□□□□□ -0.33
CPSF4-203ENST00000430038 ZNF430Q9H8G1 570 aaPredicted RBP13.02□□□□□ -0.33
CPSF4-203ENST00000430038 C19orf73Q9NVV2 129 aa13.02□□□□□ -0.33
CPSF4-203ENST00000430038 GAR1Q9NY12 217 aaKnown RBP13.02□□□□□ -0.33
CPSF4-203ENST00000430038 COA4Q9NYJ1 87 aa13.02□□□□□ -0.33
CPSF4-203ENST00000430038 RBM7Q9Y580 266 aaKnown RBP13.02□□□□□ -0.33
CPSF4-203ENST00000430038 A0A1B0GW64 132 aa13.01□□□□□ -0.33
CPSF4-203ENST00000430038 TMEM235A6NFC5 223 aa13.01□□□□□ -0.33
CPSF4-203ENST00000430038 NOTOA8MTQ0 251 aa13.01□□□□□ -0.33
CPSF4-203ENST00000430038 HLA-DQB1P01920 261 aa13.01□□□□□ -0.33
CPSF4-203ENST00000430038 SAA1P0DJI8 122 aaPredicted RBP13.01□□□□□ -0.33
CPSF4-203ENST00000430038 IGHV4-30-4P0DP06 118 aa13.01□□□□□ -0.33
CPSF4-203ENST00000430038 PTHLHP12272 177 aa13.01□□□□□ -0.33
CPSF4-203ENST00000430038 DTYMKP23919 212 aa13.01□□□□□ -0.33
CPSF4-203ENST00000430038 TALDO1P37837 337 aa13.01□□□□□ -0.33
CPSF4-203ENST00000430038 RTL8BQ17RB0 113 aa13.01□□□□□ -0.33
CPSF4-203ENST00000430038 OR2B11Q5JQS5 317 aa13.01□□□□□ -0.33
CPSF4-203ENST00000430038 VKORC1L1Q8N0U8 176 aa13.01□□□□□ -0.33
CPSF4-203ENST00000430038 OR9G4Q8NGQ1 327 aa13.01□□□□□ -0.33
CPSF4-203ENST00000430038 OR5H6Q8NGV6 325 aa13.01□□□□□ -0.33
CPSF4-203ENST00000430038 SRSF12Q8WXF0 261 aaKnown RBP13.01□□□□□ -0.33
CPSF4-203ENST00000430038 THAP7Q9BT49 309 aaPredicted RBP13.01□□□□□ -0.33
CPSF4-203ENST00000430038 PEF1Q9UBV8 284 aaKnown RBP13.01□□□□□ -0.33
CPSF4-203ENST00000430038 DAPK2Q9UIK4 370 aa13.01□□□□□ -0.33
CPSF4-203ENST00000430038 BLOC1S6Q9UL45 172 aa13.01□□□□□ -0.33
CPSF4-203ENST00000430038 STUB1Q9UNE7 303 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms