RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 PXT1Q8NFP0 134 aa4.51□□□□□ -1.69
SDCBP-203ENST00000424270 OR10G2Q8NGC3 310 aa4.51□□□□□ -1.69
SDCBP-203ENST00000424270 OR5D14Q8NGL3 314 aa4.51□□□□□ -1.69
SDCBP-203ENST00000424270 DEFB104AQ8WTQ1 72 aa4.51□□□□□ -1.69
SDCBP-203ENST00000424270 GIMAP1Q8WWP7 306 aa4.51□□□□□ -1.69
SDCBP-203ENST00000424270 SRSF12Q8WXF0 261 aaKnown RBP4.51□□□□□ -1.69
SDCBP-203ENST00000424270 NSL1Q96IY1 281 aa4.51□□□□□ -1.69
SDCBP-203ENST00000424270 HARBI1Q96MB7 349 aa4.51□□□□□ -1.69
SDCBP-203ENST00000424270 YPEL2Q96QA6 119 aa4.51□□□□□ -1.69
SDCBP-203ENST00000424270 FYTTD1Q96QD9 318 aaKnown RBP4.51□□□□□ -1.69
SDCBP-203ENST00000424270 SPIN2AQ99865 258 aa4.51□□□□□ -1.69
SDCBP-203ENST00000424270 NIPSNAP1Q9BPW8 284 aa4.51□□□□□ -1.69
SDCBP-203ENST00000424270 SPIN2BQ9BPZ2 258 aa4.51□□□□□ -1.69
SDCBP-203ENST00000424270 KRTAP9-2Q9BYQ4 174 aa4.51□□□□□ -1.69
SDCBP-203ENST00000424270 IFI27L2Q9H2X8 130 aa4.51□□□□□ -1.69
SDCBP-203ENST00000424270 IFT22Q9H7X7 185 aa4.51□□□□□ -1.69
SDCBP-203ENST00000424270 ZNF556Q9HAH1 456 aa4.51□□□□□ -1.69
SDCBP-203ENST00000424270 SPACA1Q9HBV2 294 aa4.51□□□□□ -1.69
SDCBP-203ENST00000424270 SLC35D1Q9NTN3 355 aa4.51□□□□□ -1.69
SDCBP-203ENST00000424270 TMEM14BQ9NUH8 114 aa4.51□□□□□ -1.69
SDCBP-203ENST00000424270 ARGLU1Q9NWB6 273 aaPredicted RBP4.51□□□□□ -1.69
SDCBP-203ENST00000424270 CLN6Q9NWW5 311 aa4.51□□□□□ -1.69
SDCBP-203ENST00000424270 CLEC5AQ9NY25 188 aa4.51□□□□□ -1.69
SDCBP-203ENST00000424270 TVP23BQ9NYZ1 205 aa4.51□□□□□ -1.69
SDCBP-203ENST00000424270 ZNF221Q9UK13 617 aa4.51□□□□□ -1.69
SDCBP-203ENST00000424270 TRBV9A0A0B4J1U6 114 aa4.5□□□□□ -1.69
SDCBP-203ENST00000424270 RPS10-NUDT3A0A1W2PQS6 291 aa4.5□□□□□ -1.69
SDCBP-203ENST00000424270 UBE2QL1A1L167 161 aa4.5□□□□□ -1.69
SDCBP-203ENST00000424270 DNASE2O00115 360 aaPredicted RBP4.5□□□□□ -1.69
SDCBP-203ENST00000424270 GABRPO00591 440 aa4.5□□□□□ -1.69
SDCBP-203ENST00000424270 ZNF207O43670 478 aaKnown RBP4.5□□□□□ -1.69
SDCBP-203ENST00000424270 CCDC22O60826 627 aa4.5□□□□□ -1.69
SDCBP-203ENST00000424270 NUDT3O95989 172 aa4.5□□□□□ -1.69
SDCBP-203ENST00000424270 DHFRP00374 187 aa4.5□□□□□ -1.69
SDCBP-203ENST00000424270 MT-ND2P03891 347 aa4.5□□□□□ -1.69
SDCBP-203ENST00000424270 SEMG1P04279 462 aa4.5□□□□□ -1.69
SDCBP-203ENST00000424270 CLEC3BP05452 202 aa4.5□□□□□ -1.69
SDCBP-203ENST00000424270 C8orf88P0DMB2 117 aa4.5□□□□□ -1.69
SDCBP-203ENST00000424270 GPR183P32249 361 aa4.5□□□□□ -1.69
SDCBP-203ENST00000424270 ASIPP42127 132 aa4.5□□□□□ -1.69
SDCBP-203ENST00000424270 CCL18P55774 89 aa4.5□□□□□ -1.69
SDCBP-203ENST00000424270 RPL11P62913 178 aaKnown RBP4.5□□□□□ -1.69
SDCBP-203ENST00000424270 MPV17LQ2QL34 196 aa4.5□□□□□ -1.69
SDCBP-203ENST00000424270 VMA21Q3ZAQ7 101 aa4.5□□□□□ -1.69
SDCBP-203ENST00000424270 TTC32Q5I0X7 151 aa4.5□□□□□ -1.69
SDCBP-203ENST00000424270 RAB12Q6IQ22 244 aa4.5□□□□□ -1.69
SDCBP-203ENST00000424270 ZNF66Q6ZN08 573 aa4.5□□□□□ -1.69
SDCBP-203ENST00000424270 OR10H4Q8NGA5 316 aa4.5□□□□□ -1.69
SDCBP-203ENST00000424270 OR5AN1Q8NGI8 311 aa4.5□□□□□ -1.69
SDCBP-203ENST00000424270 SETD6Q8TBK2 473 aa4.5□□□□□ -1.69
SDCBP-203ENST00000424270 NSMCE2Q96MF7 247 aa4.5□□□□□ -1.69
SDCBP-203ENST00000424270 SRSF8Q9BRL6 282 aaKnown RBP4.5□□□□□ -1.69
SDCBP-203ENST00000424270 DAZ1Q9NQZ3 744 aaKnown RBP4.5□□□□□ -1.69
SDCBP-203ENST00000424270 PAK1IP1Q9NWT1 392 aaPredicted RBP4.5□□□□□ -1.69
SDCBP-203ENST00000424270 SMPD3Q9NY59 655 aaPredicted RBP4.5□□□□□ -1.69
SDCBP-203ENST00000424270 PEX16Q9Y5Y5 336 aa4.5□□□□□ -1.69
SDCBP-203ENST00000424270 IGHV3OR16-8A0A075B7F1 116 aa4.49□□□□□ -1.69
SDCBP-203ENST00000424270 CCDC182A6NF36 153 aa4.49□□□□□ -1.69
SDCBP-203ENST00000424270 M0R1X1 148 aa4.49□□□□□ -1.69
SDCBP-203ENST00000424270 CREBL2O60519 120 aaPredicted RBP4.49□□□□□ -1.69
SDCBP-203ENST00000424270 GTF2F2P13984 249 aa4.49□□□□□ -1.69
SDCBP-203ENST00000424270 RAB3AP20336 220 aa4.49□□□□□ -1.69
SDCBP-203ENST00000424270 DEFB131AP59861 70 aa4.49□□□□□ -1.69
SDCBP-203ENST00000424270 ERVFC1-1P60608 527 aa4.49□□□□□ -1.69
SDCBP-203ENST00000424270 SSBP2P81877 361 aaPredicted RBP4.49□□□□□ -1.69
SDCBP-203ENST00000424270 CLINT1Q14677 625 aa4.49□□□□□ -1.69
SDCBP-203ENST00000424270 ATP6AP1Q15904 470 aa4.49□□□□□ -1.69
SDCBP-203ENST00000424270 TP53I3Q53FA7 332 aa4.49□□□□□ -1.69
SDCBP-203ENST00000424270 TMEM236Q5W0B7 351 aa4.49□□□□□ -1.69
SDCBP-203ENST00000424270 CDPF1Q6NVV7 123 aa4.49□□□□□ -1.69
SDCBP-203ENST00000424270 MORN3Q6PF18 240 aaPredicted RBP4.49□□□□□ -1.69
SDCBP-203ENST00000424270 GSG1LQ6UXU4 331 aa4.49□□□□□ -1.69
SDCBP-203ENST00000424270 IDO2Q6ZQW0 420 aa4.49□□□□□ -1.69
SDCBP-203ENST00000424270 SSX6Q7RTT6 188 aa4.49□□□□□ -1.69
SDCBP-203ENST00000424270 OR2A7Q96R45 310 aa4.49□□□□□ -1.69
SDCBP-203ENST00000424270 FEVQ99581 238 aa4.49□□□□□ -1.69
SDCBP-203ENST00000424270 SIKE1Q9BRV8 207 aa4.49□□□□□ -1.69
SDCBP-203ENST00000424270 CHMP1AQ9HD42 196 aaPredicted RBP4.49□□□□□ -1.69
SDCBP-203ENST00000424270 ZNF257Q9Y2Q1 563 aa4.49□□□□□ -1.69
SDCBP-203ENST00000424270 X6R8D5 127 aa4.49□□□□□ -1.69
SDCBP-203ENST00000424270 FAT1Q14517 4588 aa4.48□□□□□ -1.69
SDCBP-203ENST00000424270 IGHV3-49A0A0A0MS15 119 aa4.48□□□□□ -1.69
SDCBP-203ENST00000424270 TRBV7-1A0A0A6YYK4 115 aa4.48□□□□□ -1.69
SDCBP-203ENST00000424270 A0A1W2PQL4 384 aaPredicted RBP4.48□□□□□ -1.69
SDCBP-203ENST00000424270 ZNF705EA8MWA4 302 aaPredicted RBP4.48□□□□□ -1.69
SDCBP-203ENST00000424270 GPX5O75715 221 aa4.48□□□□□ -1.69
SDCBP-203ENST00000424270 REG1AP05451 166 aa4.48□□□□□ -1.69
SDCBP-203ENST00000424270 EIF4EP06730 217 aaKnown RBP4.48□□□□□ -1.69
SDCBP-203ENST00000424270 SPP1P10451 314 aa4.48□□□□□ -1.69
SDCBP-203ENST00000424270 GNB3P16520 340 aa4.48□□□□□ -1.69
SDCBP-203ENST00000424270 BTF3P20290 206 aaKnown RBP4.48□□□□□ -1.69
SDCBP-203ENST00000424270 HMGA2P52926 109 aa4.48□□□□□ -1.69
SDCBP-203ENST00000424270 CRISP1P54107 249 aa4.48□□□□□ -1.69
SDCBP-203ENST00000424270 RTL8BQ17RB0 113 aa4.48□□□□□ -1.69
SDCBP-203ENST00000424270 TNFAIP8L3Q5GJ75 292 aa4.48□□□□□ -1.69
SDCBP-203ENST00000424270 ZNF529Q6P280 563 aa4.48□□□□□ -1.69
SDCBP-203ENST00000424270 C19orf35Q6ZS72 473 aa4.48□□□□□ -1.69
SDCBP-203ENST00000424270 SSX9Q7RTT3 188 aa4.48□□□□□ -1.69
SDCBP-203ENST00000424270 TTC9CQ8N5M4 171 aa4.48□□□□□ -1.69
SDCBP-203ENST00000424270 ZNF383Q8NA42 475 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms