RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 ITPR1Q14643 2758 aa12.04□□□□□ -0.48
MSH5-206ENST00000423982 TNFRSF9Q07011 255 aa12.04□□□□□ -0.48
MSH5-206ENST00000423982 TCF23Q7RTU1 214 aa12.04□□□□□ -0.48
MSH5-206ENST00000423982 TUSC5Q8IXB3 177 aa12.04□□□□□ -0.48
MSH5-206ENST00000423982 SAXO1Q8IYX7 474 aa12.04□□□□□ -0.48
MSH5-206ENST00000423982 TMEM18Q96B42 140 aa12.04□□□□□ -0.48
MSH5-206ENST00000423982 FAM173AQ9BQD7 235 aa12.04□□□□□ -0.48
MSH5-206ENST00000423982 BOKQ9UMX3 212 aaPredicted RBP12.04□□□□□ -0.48
MSH5-206ENST00000423982 DEGS1O15121 323 aa12.03□□□□□ -0.48
MSH5-206ENST00000423982 DNPH1O43598 174 aa12.03□□□□□ -0.48
MSH5-206ENST00000423982 WISP2O76076 250 aa12.03□□□□□ -0.48
MSH5-206ENST00000423982 CD46P15529 392 aa12.03□□□□□ -0.48
MSH5-206ENST00000423982 IL3RAP26951 378 aa12.03□□□□□ -0.48
MSH5-206ENST00000423982 C3AR1Q16581 482 aa12.03□□□□□ -0.48
MSH5-206ENST00000423982 TMEM14EPQ6UXP3 125 aa12.03□□□□□ -0.48
MSH5-206ENST00000423982 ZNF808Q8N4W9 903 aaPredicted RBP12.03□□□□□ -0.48
MSH5-206ENST00000423982 ZNF114Q8NC26 417 aa12.03□□□□□ -0.48
MSH5-206ENST00000423982 DEFB127Q9H1M4 99 aa12.03□□□□□ -0.48
MSH5-206ENST00000423982 TRAPPC2LQ9UL33 140 aa12.03□□□□□ -0.48
MSH5-206ENST00000423982 ACACBO00763 2458 aa12.03□□□□□ -0.48
MSH5-206ENST00000423982 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.03□□□□□ -0.48
MSH5-206ENST00000423982 ZG16O60844 167 aa12.03□□□□□ -0.48
MSH5-206ENST00000423982 CEBPDP49716 269 aaPredicted RBP12.03□□□□□ -0.48
MSH5-206ENST00000423982 TNFSF10P50591 281 aa12.03□□□□□ -0.48
MSH5-206ENST00000423982 LBHQ53QV2 105 aaPredicted RBP12.03□□□□□ -0.48
MSH5-206ENST00000423982 MDS2Q8NDY4 140 aa12.03□□□□□ -0.48
MSH5-206ENST00000423982 BEND2Q8NDZ0 799 aa12.03□□□□□ -0.48
MSH5-206ENST00000423982 ACY3Q96HD9 319 aa12.03□□□□□ -0.48
MSH5-206ENST00000423982 TMEM204Q9BSN7 226 aa12.03□□□□□ -0.48
MSH5-206ENST00000423982 POLR3KQ9Y2Y1 108 aaPredicted RBP12.03□□□□□ -0.48
MSH5-206ENST00000423982 KALRNO60229 2985 aa12.03□□□□□ -0.48
MSH5-206ENST00000423982 CTXND1A0A1B0GTU2 59 aa12.02□□□□□ -0.48
MSH5-206ENST00000423982 GGCTO75223 188 aaKnown RBP12.02□□□□□ -0.48
MSH5-206ENST00000423982 C1QTNF9P0C862 333 aa12.02□□□□□ -0.48
MSH5-206ENST00000423982 HNF1AP20823 631 aa12.02□□□□□ -0.48
MSH5-206ENST00000423982 GCH1P30793 250 aa12.02□□□□□ -0.48
MSH5-206ENST00000423982 RPL30P62888 115 aaKnown RBP12.02□□□□□ -0.48
MSH5-206ENST00000423982 RNFT1Q5M7Z0 435 aa12.02□□□□□ -0.48
MSH5-206ENST00000423982 BTNL3Q6UXE8 466 aa12.02□□□□□ -0.48
MSH5-206ENST00000423982 TMEM251Q8N6I4 163 aa12.02□□□□□ -0.48
MSH5-206ENST00000423982 OR5A2Q8NGI9 324 aa12.02□□□□□ -0.48
MSH5-206ENST00000423982 ZNF703Q9H7S9 590 aaPredicted RBP12.02□□□□□ -0.48
MSH5-206ENST00000423982 TMEM250H0YL14 139 aa12.02□□□□□ -0.49
MSH5-206ENST00000423982 ATP5G3P48201 142 aa12.02□□□□□ -0.49
MSH5-206ENST00000423982 CNN1P51911 297 aaKnown RBP12.02□□□□□ -0.49
MSH5-206ENST00000423982 ACSF3Q4G176 576 aaPredicted RBP12.02□□□□□ -0.49
MSH5-206ENST00000423982 CST9LP1Q5W188 147 aa12.02□□□□□ -0.49
MSH5-206ENST00000423982 GBGT1Q8N5D6 347 aa12.02□□□□□ -0.49
MSH5-206ENST00000423982 APOBEC3DQ96AK3 386 aaPredicted RBP12.02□□□□□ -0.49
MSH5-206ENST00000423982 C5orf30Q96GV9 206 aa12.02□□□□□ -0.49
MSH5-206ENST00000423982 RIMS4Q9H426 269 aaPredicted RBP12.02□□□□□ -0.49
MSH5-206ENST00000423982 NBASA2RRP1 2371 aa12.02□□□□□ -0.49
MSH5-206ENST00000423982 A0A0U1RQK1 487 aa12.02□□□□□ -0.49
MSH5-206ENST00000423982 ZNF320A2RRD8 509 aa12.02□□□□□ -0.49
MSH5-206ENST00000423982 GRIFINA4D1Z8 144 aa12.02□□□□□ -0.49
MSH5-206ENST00000423982 TFF1P04155 84 aa12.02□□□□□ -0.49
MSH5-206ENST00000423982 TDRG1Q3Y452 100 aa12.02□□□□□ -0.49
MSH5-206ENST00000423982 Q6P435 159 aa12.02□□□□□ -0.49
MSH5-206ENST00000423982 FAM122AQ96E09 287 aa12.02□□□□□ -0.49
MSH5-206ENST00000423982 LIN7CQ9NUP9 197 aaKnown RBP12.02□□□□□ -0.49
MSH5-206ENST00000423982 FKBP11Q9NYL4 201 aa12.02□□□□□ -0.49
MSH5-206ENST00000423982 TRAV38-1A0A0B4J264 116 aa12.01□□□□□ -0.49
MSH5-206ENST00000423982 A6NNC1 897 aa12.01□□□□□ -0.49
MSH5-206ENST00000423982 C11orf94C9JXX5 98 aa12.01□□□□□ -0.49
MSH5-206ENST00000423982 KLF13Q9Y2Y9 288 aaPredicted RBP12.01□□□□□ -0.49
MSH5-206ENST00000423982 TRBV6-6A0A0A6YYG2 114 aa12.01□□□□□ -0.49
MSH5-206ENST00000423982 ODAMA1E959 279 aa12.01□□□□□ -0.49
MSH5-206ENST00000423982 OR2H2O95918 312 aa12.01□□□□□ -0.49
MSH5-206ENST00000423982 RPL29P47914 159 aaKnown RBP12.01□□□□□ -0.49
MSH5-206ENST00000423982 WDR86Q86TI4 376 aa12.01□□□□□ -0.49
MSH5-206ENST00000423982 NEIL1Q96FI4 390 aaPredicted RBP12.01□□□□□ -0.49
MSH5-206ENST00000423982 ZNF71Q9NQZ8 489 aaPredicted RBP12.01□□□□□ -0.49
MSH5-206ENST00000423982 PMS2P5A8MQ11 134 aa12□□□□□ -0.49
MSH5-206ENST00000423982 KLRC4-KLRK1H3BQV0 150 aa12□□□□□ -0.49
MSH5-206ENST00000423982 S1PR2O95136 353 aa12□□□□□ -0.49
MSH5-206ENST00000423982 COX5BP10606 129 aa12□□□□□ -0.49
MSH5-206ENST00000423982 SOX8P57073 446 aa12□□□□□ -0.49
MSH5-206ENST00000423982 GNB1P62873 340 aa12□□□□□ -0.49
MSH5-206ENST00000423982 IQCJQ1A5X6 159 aa12□□□□□ -0.49
MSH5-206ENST00000423982 LINC01551Q86U37 167 aa12□□□□□ -0.49
MSH5-206ENST00000423982 SDSLQ96GA7 329 aa12□□□□□ -0.49
MSH5-206ENST00000423982 POM121L2Q96KW2 1035 aa12□□□□□ -0.49
MSH5-206ENST00000423982 NPCDR1Q9BY65 106 aa12□□□□□ -0.49
MSH5-206ENST00000423982 B4GALT7Q9UBV7 327 aa12□□□□□ -0.49
MSH5-206ENST00000423982 TRAPPC1Q9Y5R8 145 aa12□□□□□ -0.49
MSH5-206ENST00000423982 NDUFB4O95168 129 aa12□□□□□ -0.49
MSH5-206ENST00000423982 GFRA1P56159 465 aa12□□□□□ -0.49
MSH5-206ENST00000423982 RPL15P61313 204 aaKnown RBP12□□□□□ -0.49
MSH5-206ENST00000423982 CISD2Q8N5K1 135 aaKnown RBP12□□□□□ -0.49
MSH5-206ENST00000423982 ANAPC16Q96DE5 110 aa12□□□□□ -0.49
MSH5-206ENST00000423982 PRR14LQ5THK1 2151 aa11.99□□□□□ -0.49
MSH5-206ENST00000423982 ANKRD30BLA7E2S9 258 aa11.99□□□□□ -0.49
MSH5-206ENST00000423982 RBFOX2O43251 390 aaKnown RBP eCLIP11.99□□□□□ -0.492e-20■□□□□ 10.6
MSH5-206ENST00000423982 BRWD1-AS2P59051 145 aa11.99□□□□□ -0.49
MSH5-206ENST00000423982 GNG3P63215 75 aa11.99□□□□□ -0.49
MSH5-206ENST00000423982 ACOT6Q3I5F7 207 aaPredicted RBP11.99□□□□□ -0.49
MSH5-206ENST00000423982 IMMP2LQ96T52 175 aa11.99□□□□□ -0.49
MSH5-206ENST00000423982 OR2D2Q9H210 308 aa11.99□□□□□ -0.49
MSH5-206ENST00000423982 HSPB7Q9UBY9 170 aa11.99□□□□□ -0.49
MSH5-206ENST00000423982 C17orf98A8MV24 154 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 214.3 ms