RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 RRBP1Q9P2E9 1410 aaKnown RBP1.77□□□□□ -2.13
HMGB1P49-201ENST00000418882 GMNCA6NCL1 334 aa1.77□□□□□ -2.13
HMGB1P49-201ENST00000418882 A8MWP4 228 aa1.77□□□□□ -2.13
HMGB1P49-201ENST00000418882 OR7C2O60412 319 aa1.77□□□□□ -2.13
HMGB1P49-201ENST00000418882 DEDDO75618 318 aa1.77□□□□□ -2.13
HMGB1P49-201ENST00000418882 SCO1O75880 301 aa1.77□□□□□ -2.13
HMGB1P49-201ENST00000418882 IGKV1D-33P01593 117 aa1.77□□□□□ -2.13
HMGB1P49-201ENST00000418882 IGKV1-33P01594 117 aa1.77□□□□□ -2.13
HMGB1P49-201ENST00000418882 IGLV6-57P01721 117 aa1.77□□□□□ -2.13
HMGB1P49-201ENST00000418882 TTRP02766 147 aa1.77□□□□□ -2.13
HMGB1P49-201ENST00000418882 CRYGDP07320 174 aa1.77□□□□□ -2.13
HMGB1P49-201ENST00000418882 CBR1P16152 277 aa1.77□□□□□ -2.13
HMGB1P49-201ENST00000418882 HIST1H1TP22492 207 aaPredicted RBP1.77□□□□□ -2.13
HMGB1P49-201ENST00000418882 CDK2P24941 298 aa1.77□□□□□ -2.13
HMGB1P49-201ENST00000418882 DDTP30046 118 aa1.77□□□□□ -2.13
HMGB1P49-201ENST00000418882 OR10J1P30954 320 aa1.77□□□□□ -2.13
HMGB1P49-201ENST00000418882 RPS20P60866 119 aaKnown RBP1.77□□□□□ -2.13
HMGB1P49-201ENST00000418882 PSME3P61289 254 aa1.77□□□□□ -2.13
HMGB1P49-201ENST00000418882 RPL19P84098 196 aaKnown RBP1.77□□□□□ -2.13
HMGB1P49-201ENST00000418882 EBPQ15125 230 aaKnown RBP1.77□□□□□ -2.13
HMGB1P49-201ENST00000418882 CDK10Q15131 360 aa1.77□□□□□ -2.13
HMGB1P49-201ENST00000418882 SPA17Q15506 151 aa1.77□□□□□ -2.13
HMGB1P49-201ENST00000418882 MOGQ16653 247 aa1.77□□□□□ -2.13
HMGB1P49-201ENST00000418882 FAM78BQ5VT40 261 aa1.77□□□□□ -2.13
HMGB1P49-201ENST00000418882 LPCAT3Q6P1A2 487 aa1.77□□□□□ -2.13
HMGB1P49-201ENST00000418882 WDR59Q6PJI9 974 aa1.77□□□□□ -2.13
HMGB1P49-201ENST00000418882 HIST2H3AQ71DI3 136 aa1.77□□□□□ -2.13
HMGB1P49-201ENST00000418882 TMEM144Q7Z5S9 345 aa1.77□□□□□ -2.13
HMGB1P49-201ENST00000418882 ZBTB8OSQ8IWT0 167 aa1.77□□□□□ -2.13
HMGB1P49-201ENST00000418882 SGPP2Q8IWX5 399 aa1.77□□□□□ -2.13
HMGB1P49-201ENST00000418882 UMODL1-AS1Q8N2C9 162 aa1.77□□□□□ -2.13
HMGB1P49-201ENST00000418882 NATD1Q8N6N6 113 aa1.77□□□□□ -2.13
HMGB1P49-201ENST00000418882 LHFPL5Q8TAF8 219 aa1.77□□□□□ -2.13
HMGB1P49-201ENST00000418882 RNASE6Q93091 150 aaKnown RBP1.77□□□□□ -2.13
HMGB1P49-201ENST00000418882 SFRP2Q96HF1 295 aa1.77□□□□□ -2.13
HMGB1P49-201ENST00000418882 PHB2Q99623 299 aa1.77□□□□□ -2.13
HMGB1P49-201ENST00000418882 SMPXQ9UHP9 88 aa1.77□□□□□ -2.13
HMGB1P49-201ENST00000418882 HHLA2Q9UM44 414 aa1.77□□□□□ -2.13
HMGB1P49-201ENST00000418882 TIMM22Q9Y584 194 aa1.77□□□□□ -2.13
HMGB1P49-201ENST00000418882 POLR1AO95602 1720 aaPredicted RBP1.77□□□□□ -2.13
HMGB1P49-201ENST00000418882 SYNJ1O43426 1573 aa1.76□□□□□ -2.13
HMGB1P49-201ENST00000418882 SMARCA2P51531 1590 aa1.76□□□□□ -2.13
HMGB1P49-201ENST00000418882 GRIN2BQ13224 1484 aa1.76□□□□□ -2.13
HMGB1P49-201ENST00000418882 CECR2Q9BXF3 1484 aa1.76□□□□□ -2.13
HMGB1P49-201ENST00000418882 CEP164Q9UPV0 1460 aa1.76□□□□□ -2.13
HMGB1P49-201ENST00000418882 CLIP1P30622 1438 aa1.76□□□□□ -2.13
HMGB1P49-201ENST00000418882 VPS8Q8N3P4 1428 aa1.76□□□□□ -2.13
HMGB1P49-201ENST00000418882 MIA3Q5JRA6 1907 aa1.76□□□□□ -2.13
HMGB1P49-201ENST00000418882 CHD2O14647 1828 aaKnown RBP1.76□□□□□ -2.13
HMGB1P49-201ENST00000418882 TRAV8-1A0A0A6YYK1 113 aa1.76□□□□□ -2.13
HMGB1P49-201ENST00000418882 EXOC1LA0A1B0GW35 172 aa1.76□□□□□ -2.13
HMGB1P49-201ENST00000418882 OR5H14A6NHG9 310 aa1.76□□□□□ -2.13
HMGB1P49-201ENST00000418882 H3BSA7 217 aa1.76□□□□□ -2.13
HMGB1P49-201ENST00000418882 FAAHO00519 579 aa1.76□□□□□ -2.13
HMGB1P49-201ENST00000418882 RGS5O15539 181 aa1.76□□□□□ -2.13
HMGB1P49-201ENST00000418882 NOS1APO75052 506 aaPredicted RBP1.76□□□□□ -2.13
HMGB1P49-201ENST00000418882 OR7C1O76099 320 aaPredicted RBP1.76□□□□□ -2.13
HMGB1P49-201ENST00000418882 GPR75O95800 540 aa1.76□□□□□ -2.13
HMGB1P49-201ENST00000418882 IGHV1-46P01743 117 aa1.76□□□□□ -2.13
HMGB1P49-201ENST00000418882 OPN1SWP03999 348 aa1.76□□□□□ -2.13
HMGB1P49-201ENST00000418882 BTN1A1Q13410 526 aa1.76□□□□□ -2.13
HMGB1P49-201ENST00000418882 MMDQ15546 238 aa1.76□□□□□ -2.13
HMGB1P49-201ENST00000418882 LIN52Q52LA3 116 aa1.76□□□□□ -2.13
HMGB1P49-201ENST00000418882 SLC36A1Q7Z2H8 476 aa1.76□□□□□ -2.13
HMGB1P49-201ENST00000418882 TAC4Q86UU9 113 aa1.76□□□□□ -2.13
HMGB1P49-201ENST00000418882 SMIM20Q8N5G0 67 aa1.76□□□□□ -2.13
HMGB1P49-201ENST00000418882 OR11G2Q8NGC1 345 aa1.76□□□□□ -2.13
HMGB1P49-201ENST00000418882 SGMS2Q8NHU3 365 aa1.76□□□□□ -2.13
HMGB1P49-201ENST00000418882 JOSD2Q8TAC2 188 aa1.76□□□□□ -2.13
HMGB1P49-201ENST00000418882 TEX47Q8TBZ9 253 aa1.76□□□□□ -2.13
HMGB1P49-201ENST00000418882 LMX1AQ8TE12 382 aa1.76□□□□□ -2.13
HMGB1P49-201ENST00000418882 FAM172AQ8WUF8 416 aa1.76□□□□□ -2.13
HMGB1P49-201ENST00000418882 CPNE2Q96FN4 548 aaPredicted RBP1.76□□□□□ -2.13
HMGB1P49-201ENST00000418882 ABHD14BQ96IU4 210 aa1.76□□□□□ -2.13
HMGB1P49-201ENST00000418882 ERMAPQ96PL5 475 aaPredicted RBP1.76□□□□□ -2.13
HMGB1P49-201ENST00000418882 SEC22CQ9BRL7 303 aa1.76□□□□□ -2.13
HMGB1P49-201ENST00000418882 OR2D2Q9H210 308 aa1.76□□□□□ -2.13
HMGB1P49-201ENST00000418882 OR51I2Q9H344 312 aa1.76□□□□□ -2.13
HMGB1P49-201ENST00000418882 TRABDQ9H4I3 376 aa1.76□□□□□ -2.13
HMGB1P49-201ENST00000418882 CXorf21Q9HAI6 301 aa1.76□□□□□ -2.13
HMGB1P49-201ENST00000418882 UQCC1Q9NVA1 299 aa1.76□□□□□ -2.13
HMGB1P49-201ENST00000418882 WASHC3Q9Y3C0 194 aa1.76□□□□□ -2.13
HMGB1P49-201ENST00000418882 CAMSAP1Q5T5Y3 1602 aa1.76□□□□□ -2.13
HMGB1P49-201ENST00000418882 MAPKBP1O60336 1514 aa1.76□□□□□ -2.13
HMGB1P49-201ENST00000418882 SOGA1O94964 1423 aa1.75□□□□□ -2.13
HMGB1P49-201ENST00000418882 CRB1P82279 1406 aa1.75□□□□□ -2.13
HMGB1P49-201ENST00000418882 ROBO3Q96MS0 1386 aa1.75□□□□□ -2.13
HMGB1P49-201ENST00000418882 IGKV1OR2-108A0A075B7D4 117 aa1.75□□□□□ -2.13
HMGB1P49-201ENST00000418882 IGHV3OR15-7A0A075B7D8 119 aa1.75□□□□□ -2.13
HMGB1P49-201ENST00000418882 IGHV3-21A0A0B4J1V1 117 aa1.75□□□□□ -2.13
HMGB1P49-201ENST00000418882 PQLC2LA1A4F0 135 aa1.75□□□□□ -2.13
HMGB1P49-201ENST00000418882 LST1O00453 97 aa1.75□□□□□ -2.13
HMGB1P49-201ENST00000418882 OR2B3O76000 313 aa1.75□□□□□ -2.13
HMGB1P49-201ENST00000418882 CD79AP11912 226 aa1.75□□□□□ -2.13
HMGB1P49-201ENST00000418882 GABRA3P34903 492 aa1.75□□□□□ -2.13
HMGB1P49-201ENST00000418882 MPV17P39210 176 aa1.75□□□□□ -2.13
HMGB1P49-201ENST00000418882 RPL5P46777 297 aaKnown RBP1.75□□□□□ -2.13
HMGB1P49-201ENST00000418882 TAS2R41P59536 307 aa1.75□□□□□ -2.13
HMGB1P49-201ENST00000418882 FGF12P61328 243 aa1.75□□□□□ -2.13
HMGB1P49-201ENST00000418882 HIST1H3AP68431 136 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 175.6 ms