RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 SIGLEC8Q9NYZ4 499 aa11.28□□□□□ -0.6
RPS28-201ENST00000417088 V9GY05 133 aa11.28□□□□□ -0.6
RPS28-201ENST00000417088 TMEM272A0A1B0GTI8 110 aa11.27□□□□□ -0.61
RPS28-201ENST00000417088 MSGN1A6NI15 193 aa11.27□□□□□ -0.61
RPS28-201ENST00000417088 SHOXO15266 292 aa11.27□□□□□ -0.61
RPS28-201ENST00000417088 PSMA1P25786 263 aaKnown RBP11.27□□□□□ -0.61
RPS28-201ENST00000417088 MRPS15P82914 257 aaKnown RBP11.27□□□□□ -0.61
RPS28-201ENST00000417088 FABP5Q01469 135 aa11.27□□□□□ -0.61
RPS28-201ENST00000417088 TAGLNQ01995 201 aaKnown RBP11.27□□□□□ -0.61
RPS28-201ENST00000417088 CBX3Q13185 183 aa11.27□□□□□ -0.61
RPS28-201ENST00000417088 TATDN3Q17R31 274 aa11.27□□□□□ -0.61
RPS28-201ENST00000417088 HES5Q5TA89 166 aa11.27□□□□□ -0.61
RPS28-201ENST00000417088 OR10J5Q8NHC4 309 aa11.27□□□□□ -0.61
RPS28-201ENST00000417088 RAB3CQ96E17 227 aa11.27□□□□□ -0.61
RPS28-201ENST00000417088 USMG5Q96IX5 58 aa11.27□□□□□ -0.61
RPS28-201ENST00000417088 COA4Q9NYJ1 87 aa11.27□□□□□ -0.61
RPS28-201ENST00000417088 RAB22AQ9UL26 194 aa11.27□□□□□ -0.61
RPS28-201ENST00000417088 TPRKBQ9Y3C4 175 aa11.27□□□□□ -0.61
RPS28-201ENST00000417088 IZUMO1RA6ND01 250 aa11.26□□□□□ -0.61
RPS28-201ENST00000417088 DIRAS3O95661 229 aa11.26□□□□□ -0.61
RPS28-201ENST00000417088 APELAP0DMC3 54 aa11.26□□□□□ -0.61
RPS28-201ENST00000417088 MECP2P51608 486 aaKnown RBP11.26□□□□□ -0.61
RPS28-201ENST00000417088 MLLT11Q13015 90 aaPredicted RBP11.26□□□□□ -0.61
RPS28-201ENST00000417088 RTL8BQ17RB0 113 aa11.26□□□□□ -0.61
RPS28-201ENST00000417088 RPEL1Q2QD12 228 aa11.26□□□□□ -0.61
RPS28-201ENST00000417088 LCN12Q6JVE5 192 aa11.26□□□□□ -0.61
RPS28-201ENST00000417088 GTSCR1Q86UQ5 136 aa11.26□□□□□ -0.61
RPS28-201ENST00000417088 TEX45Q8NA69 505 aa11.26□□□□□ -0.61
RPS28-201ENST00000417088 ADAD2Q8NCV1 583 aaKnown RBP11.26□□□□□ -0.61
RPS28-201ENST00000417088 MAFIPQ8WZ33 124 aa11.26□□□□□ -0.61
RPS28-201ENST00000417088 DDB2Q92466 427 aa11.26□□□□□ -0.61
RPS28-201ENST00000417088 PHB2Q99623 299 aa11.26□□□□□ -0.61
RPS28-201ENST00000417088 RGS10O43665 173 aa11.25□□□□□ -0.61
RPS28-201ENST00000417088 OR9G9P0C7N8 305 aa11.25□□□□□ -0.61
RPS28-201ENST00000417088 RRASP10301 218 aa11.25□□□□□ -0.61
RPS28-201ENST00000417088 DUTP33316 252 aaKnown RBP11.25□□□□□ -0.61
RPS28-201ENST00000417088 RANBP1P43487 201 aa11.25□□□□□ -0.61
RPS28-201ENST00000417088 PSMD7P51665 324 aa11.25□□□□□ -0.61
RPS28-201ENST00000417088 UBE2KP61086 200 aa11.25□□□□□ -0.61
RPS28-201ENST00000417088 PRSS8Q16651 343 aa11.25□□□□□ -0.61
RPS28-201ENST00000417088 VMA21Q3ZAQ7 101 aa11.25□□□□□ -0.61
RPS28-201ENST00000417088 ADAMTSL5Q6ZMM2 481 aa11.25□□□□□ -0.61
RPS28-201ENST00000417088 Q8N402 240 aa11.25□□□□□ -0.61
RPS28-201ENST00000417088 OR10R2Q8NGX6 335 aa11.25□□□□□ -0.61
RPS28-201ENST00000417088 SNAPC3Q92966 411 aa11.25□□□□□ -0.61
RPS28-201ENST00000417088 TUBA4BQ9H853 241 aa11.25□□□□□ -0.61
RPS28-201ENST00000417088 ZNF230Q9UIE0 474 aaPredicted RBP11.25□□□□□ -0.61
RPS28-201ENST00000417088 RBM7Q9Y580 266 aaKnown RBP11.25□□□□□ -0.61
RPS28-201ENST00000417088 LINC00473A8K010 186 aa11.24□□□□□ -0.61
RPS28-201ENST00000417088 RAB27BO00194 218 aa11.24□□□□□ -0.61
RPS28-201ENST00000417088 MFNGO00587 321 aa11.24□□□□□ -0.61
RPS28-201ENST00000417088 OR2A4O95047 310 aa11.24□□□□□ -0.61
RPS28-201ENST00000417088 CRYZL1O95825 349 aa11.24□□□□□ -0.61
RPS28-201ENST00000417088 GNB3P16520 340 aa11.24□□□□□ -0.61
RPS28-201ENST00000417088 TNXAQ16473 311 aa11.24□□□□□ -0.61
RPS28-201ENST00000417088 IDO2Q6ZQW0 420 aa11.24□□□□□ -0.61
RPS28-201ENST00000417088 SRSF12Q8WXF0 261 aaKnown RBP11.24□□□□□ -0.61
RPS28-201ENST00000417088 ADTRPQ96IZ2 230 aa11.24□□□□□ -0.61
RPS28-201ENST00000417088 MGLLQ99685 303 aa11.24□□□□□ -0.61
RPS28-201ENST00000417088 ACOT13Q9NPJ3 140 aa11.24□□□□□ -0.61
RPS28-201ENST00000417088 AKIP1Q9NQ31 210 aa11.24□□□□□ -0.61
RPS28-201ENST00000417088 HYDINQ4G0P3 5121 aa11.23□□□□□ -0.61
RPS28-201ENST00000417088 SHISA3A0PJX4 238 aa11.23□□□□□ -0.61
RPS28-201ENST00000417088 BMPR1BO00238 502 aa11.23□□□□□ -0.61
RPS28-201ENST00000417088 PRH1P02810 166 aa11.23□□□□□ -0.61
RPS28-201ENST00000417088 IFNA6P05013 189 aa11.23□□□□□ -0.61
RPS28-201ENST00000417088 HIST1H1DP16402 221 aaKnown RBP11.23□□□□□ -0.61
RPS28-201ENST00000417088 GADD45AP24522 165 aa11.23□□□□□ -0.61
RPS28-201ENST00000417088 MAP2K4P45985 399 aa11.23□□□□□ -0.61
RPS28-201ENST00000417088 AQP4P55087 323 aa11.23□□□□□ -0.61
RPS28-201ENST00000417088 OR10A3P58181 314 aa11.23□□□□□ -0.61
RPS28-201ENST00000417088 RHOGP84095 191 aa11.23□□□□□ -0.61
RPS28-201ENST00000417088 ZNF45Q02386 682 aa11.23□□□□□ -0.61
RPS28-201ENST00000417088 LINC00322Q6ZN03 302 aaPredicted RBP11.23□□□□□ -0.61
RPS28-201ENST00000417088 H1FOOQ8IZA3 346 aaPredicted RBP11.23□□□□□ -0.61
RPS28-201ENST00000417088 GINS4Q9BRT9 223 aa11.23□□□□□ -0.61
RPS28-201ENST00000417088 CCDC90BQ9GZT6 254 aa11.23□□□□□ -0.61
RPS28-201ENST00000417088 PEMTQ9UBM1 199 aa11.23□□□□□ -0.61
RPS28-201ENST00000417088 NKX1-2Q9UD57 310 aaPredicted RBP11.23□□□□□ -0.61
RPS28-201ENST00000417088 A0A075B6Q4 140 aa11.22□□□□□ -0.61
RPS28-201ENST00000417088 IGKV1D-8A0A087WSZ0 117 aa11.22□□□□□ -0.61
RPS28-201ENST00000417088 TRBV9A0A0B4J1U6 114 aa11.22□□□□□ -0.61
RPS28-201ENST00000417088 A0A0B4J203 849 aa11.22□□□□□ -0.61
RPS28-201ENST00000417088 FAM223BA6NKX1 122 aa11.22□□□□□ -0.61
RPS28-201ENST00000417088 IFITM5A6NNB3 132 aa11.22□□□□□ -0.61
RPS28-201ENST00000417088 CRHBPP24387 322 aa11.22□□□□□ -0.61
RPS28-201ENST00000417088 EXOSC2Q13868 293 aaKnown RBP11.22□□□□□ -0.61
RPS28-201ENST00000417088 Q6ZS49 121 aa11.22□□□□□ -0.61
RPS28-201ENST00000417088 PRSS48Q7RTY5 328 aa11.22□□□□□ -0.61
RPS28-201ENST00000417088 FAM223AQ8IWN6 122 aa11.22□□□□□ -0.61
RPS28-201ENST00000417088 OR2K2Q8NGT1 345 aa11.22□□□□□ -0.61
RPS28-201ENST00000417088 OSR1Q8TAX0 266 aaPredicted RBP11.22□□□□□ -0.61
RPS28-201ENST00000417088 NRG4Q8WWG1 115 aa11.22□□□□□ -0.61
RPS28-201ENST00000417088 ACOT12Q8WYK0 555 aa11.22□□□□□ -0.61
RPS28-201ENST00000417088 ZNF430Q9H8G1 570 aaPredicted RBP11.22□□□□□ -0.61
RPS28-201ENST00000417088 RETNQ9HD89 108 aa11.22□□□□□ -0.61
RPS28-201ENST00000417088 PLECQ15149 4684 aaKnown RBP11.21□□□□□ -0.61
RPS28-201ENST00000417088 TRAV1-2A0A0B4J238 106 aa11.21□□□□□ -0.61
RPS28-201ENST00000417088 ZNF785A8K8V0 405 aa11.21□□□□□ -0.61
RPS28-201ENST00000417088 ANKRD65E5RJM6 399 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 116.2 ms