RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 ZNF616Q08AN1 781 aa3.8□□□□□ -1.8
SF3B1-202ENST00000409915 CLINT1Q14677 625 aa3.8□□□□□ -1.8
SF3B1-202ENST00000409915 ATXN7L3Q14CW9 347 aaPredicted RBP3.8□□□□□ -1.8
SF3B1-202ENST00000409915 ARL6IP1Q15041 203 aa3.8□□□□□ -1.8
SF3B1-202ENST00000409915 SLC9A3R2Q15599 337 aa3.8□□□□□ -1.8
SF3B1-202ENST00000409915 LRRC37A5PQ49AS3 106 aa3.8□□□□□ -1.8
SF3B1-202ENST00000409915 OCIAD2Q56VL3 154 aa3.8□□□□□ -1.8
SF3B1-202ENST00000409915 LY6G6FQ5SQ64 297 aa3.8□□□□□ -1.8
SF3B1-202ENST00000409915 GLT8D1Q68CQ7 371 aa3.8□□□□□ -1.8
SF3B1-202ENST00000409915 C22orf42Q6IC83 251 aa3.8□□□□□ -1.8
SF3B1-202ENST00000409915 ADAM5Q6NVV9 412 aa3.8□□□□□ -1.8
SF3B1-202ENST00000409915 Q6ZRG5 221 aa3.8□□□□□ -1.8
SF3B1-202ENST00000409915 SLC25A26Q70HW3 274 aa3.8□□□□□ -1.8
SF3B1-202ENST00000409915 ZNF546Q86UE3 836 aa3.8□□□□□ -1.8
SF3B1-202ENST00000409915 TMEM183AQ8IXX5 376 aa3.8□□□□□ -1.8
SF3B1-202ENST00000409915 C11orf42Q8N5U0 333 aa3.8□□□□□ -1.8
SF3B1-202ENST00000409915 CCDC71LQ8N9Z2 235 aa3.8□□□□□ -1.8
SF3B1-202ENST00000409915 OR52E5Q8NH55 327 aa3.8□□□□□ -1.8
SF3B1-202ENST00000409915 PFN4Q8NHR9 129 aa3.8□□□□□ -1.8
SF3B1-202ENST00000409915 TMEM255BQ8WV15 326 aa3.8□□□□□ -1.8
SF3B1-202ENST00000409915 FCAMRQ8WWV6 532 aa3.8□□□□□ -1.8
SF3B1-202ENST00000409915 RNASE6Q93091 150 aaKnown RBP3.8□□□□□ -1.8
SF3B1-202ENST00000409915 RPUSD4Q96CM3 377 aaKnown RBP3.8□□□□□ -1.8
SF3B1-202ENST00000409915 ZFP3Q96NJ6 502 aa3.8□□□□□ -1.8
SF3B1-202ENST00000409915 OR2V2Q96R30 315 aa3.8□□□□□ -1.8
SF3B1-202ENST00000409915 PRSS27Q9BQR3 290 aa3.8□□□□□ -1.8
SF3B1-202ENST00000409915 SELENOIQ9C0D9 397 aa3.8□□□□□ -1.8
SF3B1-202ENST00000409915 OR2J1Q9GZK6 312 aa3.8□□□□□ -1.8
SF3B1-202ENST00000409915 POLR2J2Q9GZM3 115 aaKnown RBP3.8□□□□□ -1.8
SF3B1-202ENST00000409915 ARV1Q9H2C2 271 aa3.8□□□□□ -1.8
SF3B1-202ENST00000409915 CXXC4Q9H2H0 198 aa3.8□□□□□ -1.8
SF3B1-202ENST00000409915 C1orf198Q9H425 327 aa3.8□□□□□ -1.8
SF3B1-202ENST00000409915 EGLN3Q9H6Z9 239 aa3.8□□□□□ -1.8
SF3B1-202ENST00000409915 ELOVL5Q9NYP7 299 aa3.8□□□□□ -1.8
SF3B1-202ENST00000409915 SLC7A7Q9UM01 511 aa3.8□□□□□ -1.8
SF3B1-202ENST00000409915 SLC22A13Q9Y226 551 aa3.8□□□□□ -1.8
SF3B1-202ENST00000409915 RPL36Q9Y3U8 105 aaKnown RBP3.8□□□□□ -1.8
SF3B1-202ENST00000409915 PKDREJQ9NTG1 2253 aa3.8□□□□□ -1.8
SF3B1-202ENST00000409915 ANKHD1Q8IWZ3 2542 aaKnown RBP3.8□□□□□ -1.8
SF3B1-202ENST00000409915 NOTCH2Q04721 2471 aa3.8□□□□□ -1.8
SF3B1-202ENST00000409915 HRNRQ86YZ3 2850 aaPredicted RBP3.8□□□□□ -1.8
SF3B1-202ENST00000409915 LRBAP50851 2863 aa3.79□□□□□ -1.8
SF3B1-202ENST00000409915 MPDZO75970 2070 aa3.79□□□□□ -1.8
SF3B1-202ENST00000409915 CSMD2Q7Z408 3487 aa3.79□□□□□ -1.8
SF3B1-202ENST00000409915 TRAV36DV7A0A075B6V5 113 aa3.79□□□□□ -1.8
SF3B1-202ENST00000409915 TGIF2-C20orf24A0A0A6YYL0 155 aa3.79□□□□□ -1.8
SF3B1-202ENST00000409915 C11orf98E9PRG8 122 aa3.79□□□□□ -1.8
SF3B1-202ENST00000409915 F6UZH7 168 aa3.79□□□□□ -1.8
SF3B1-202ENST00000409915 G3V4G9 280 aa3.79□□□□□ -1.8
SF3B1-202ENST00000409915 GABRPO00591 440 aa3.79□□□□□ -1.8
SF3B1-202ENST00000409915 FFAR1O14842 300 aa3.79□□□□□ -1.8
SF3B1-202ENST00000409915 XRCC2O43543 280 aa3.79□□□□□ -1.8
SF3B1-202ENST00000409915 ENTPD6O75354 484 aa3.79□□□□□ -1.8
SF3B1-202ENST00000409915 LYZL6O75951 148 aa3.79□□□□□ -1.8
SF3B1-202ENST00000409915 NDUFB8O95169 186 aa3.79□□□□□ -1.8
SF3B1-202ENST00000409915 AMBPP02760 352 aa3.79□□□□□ -1.8
SF3B1-202ENST00000409915 HLA-DPB1P04440 258 aa3.79□□□□□ -1.8
SF3B1-202ENST00000409915 IFNW1P05000 195 aa3.79□□□□□ -1.8
SF3B1-202ENST00000409915 FABP3P05413 133 aa3.79□□□□□ -1.8
SF3B1-202ENST00000409915 HLA-DOBP13765 273 aa3.79□□□□□ -1.8
SF3B1-202ENST00000409915 ZNF43P17038 809 aa3.79□□□□□ -1.8
SF3B1-202ENST00000409915 AADACP22760 399 aa3.79□□□□□ -1.8
SF3B1-202ENST00000409915 APLNRP35414 380 aa3.79□□□□□ -1.8
SF3B1-202ENST00000409915 AKR1C3P42330 323 aa3.79□□□□□ -1.8
SF3B1-202ENST00000409915 LGALS7P47929 136 aa3.79□□□□□ -1.8
SF3B1-202ENST00000409915 SULT1A1P50225 295 aa3.79□□□□□ -1.8
SF3B1-202ENST00000409915 RAB7AP51149 207 aa3.79□□□□□ -1.8
SF3B1-202ENST00000409915 KRTAP10-9P60411 292 aa3.79□□□□□ -1.8
SF3B1-202ENST00000409915 RPS23P62266 143 aaKnown RBP3.79□□□□□ -1.8
SF3B1-202ENST00000409915 SELENOWP63302 87 aa3.79□□□□□ -1.8
SF3B1-202ENST00000409915 H3F3AP84243 136 aa3.79□□□□□ -1.8
SF3B1-202ENST00000409915 LTBQ06643 244 aa3.79□□□□□ -1.8
SF3B1-202ENST00000409915 OR5I1Q13606 314 aa3.79□□□□□ -1.8
SF3B1-202ENST00000409915 RBM39Q14498 530 aaKnown RBP3.79□□□□□ -1.8
SF3B1-202ENST00000409915 FBXL19-AS1Q494R0 122 aa3.79□□□□□ -1.8
SF3B1-202ENST00000409915 TP53I3Q53FA7 332 aa3.79□□□□□ -1.8
SF3B1-202ENST00000409915 C12orf73Q69YU5 71 aa3.79□□□□□ -1.8
SF3B1-202ENST00000409915 AWAT2Q6E213 333 aa3.79□□□□□ -1.8
SF3B1-202ENST00000409915 STEAP1BQ6NZ63 245 aa3.79□□□□□ -1.8
SF3B1-202ENST00000409915 ZNF613Q6PF04 617 aa3.79□□□□□ -1.8
SF3B1-202ENST00000409915 PAQR6Q6TCH4 344 aa3.79□□□□□ -1.8
SF3B1-202ENST00000409915 Q71RC1 249 aaPredicted RBP3.79□□□□□ -1.8
SF3B1-202ENST00000409915 TSEN54Q7Z6J9 526 aaKnown RBP3.79□□□□□ -1.8
SF3B1-202ENST00000409915 C20orf196Q8IYI0 205 aa3.79□□□□□ -1.8
SF3B1-202ENST00000409915 ZNF100Q8IYN0 542 aa3.79□□□□□ -1.8
SF3B1-202ENST00000409915 FAM24BQ8N5W8 94 aa3.79□□□□□ -1.8
SF3B1-202ENST00000409915 SLC35G3Q8N808 338 aa3.79□□□□□ -1.8
SF3B1-202ENST00000409915 ZIC4Q8N9L1 334 aa3.79□□□□□ -1.8
SF3B1-202ENST00000409915 NOXO1Q8NFA2 376 aa3.79□□□□□ -1.8
SF3B1-202ENST00000409915 OR5AP2Q8NGF4 316 aa3.79□□□□□ -1.8
SF3B1-202ENST00000409915 OR52I1Q8NGK6 324 aa3.79□□□□□ -1.8
SF3B1-202ENST00000409915 OR1B1Q8NGR6 318 aa3.79□□□□□ -1.8
SF3B1-202ENST00000409915 OR5AK2Q8NH90 309 aa3.79□□□□□ -1.8
SF3B1-202ENST00000409915 GEMIN6Q8WXD5 167 aaKnown RBP3.79□□□□□ -1.8
SF3B1-202ENST00000409915 SLC35E1Q96K37 410 aa3.79□□□□□ -1.8
SF3B1-202ENST00000409915 Q96MF0 132 aa3.79□□□□□ -1.8
SF3B1-202ENST00000409915 TP53RKQ96S44 253 aa3.79□□□□□ -1.8
SF3B1-202ENST00000409915 VPS25Q9BRG1 176 aa3.79□□□□□ -1.8
SF3B1-202ENST00000409915 DCTN5Q9BTE1 182 aa3.79□□□□□ -1.8
SF3B1-202ENST00000409915 MAP1LC3CQ9BXW4 147 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 105.2 ms