RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 SH3BGRL3Q9H299 93 aa15.55■□□□□ 0.08
USP39-202ENST00000409025 PARP11Q9NR21 331 aa15.55■□□□□ 0.08
USP39-202ENST00000409025 MMP26Q9NRE1 261 aa15.55■□□□□ 0.08
USP39-202ENST00000409025 OR9G9P0C7N8 305 aa15.55■□□□□ 0.08
USP39-202ENST00000409025 METTL15P1P0C7V9 234 aa15.55■□□□□ 0.08
USP39-202ENST00000409025 RAB5CP51148 216 aa15.55■□□□□ 0.08
USP39-202ENST00000409025 HBG1P69891 147 aa15.55■□□□□ 0.08
USP39-202ENST00000409025 HBG2P69892 147 aa15.55■□□□□ 0.08
USP39-202ENST00000409025 TMEM155Q4W5P6 130 aa15.55■□□□□ 0.08
USP39-202ENST00000409025 SSX9Q7RTT3 188 aa15.55■□□□□ 0.08
USP39-202ENST00000409025 CCDC28AQ8IWP9 274 aa15.55■□□□□ 0.08
USP39-202ENST00000409025 ZNF383Q8NA42 475 aa15.55■□□□□ 0.08
USP39-202ENST00000409025 NEU4Q8WWR8 484 aaPredicted RBP15.55■□□□□ 0.08
USP39-202ENST00000409025 LINC00052Q96N35 136 aa15.55■□□□□ 0.08
USP39-202ENST00000409025 CIB3Q96Q77 187 aaPredicted RBP15.55■□□□□ 0.08
USP39-202ENST00000409025 RALYQ9UKM9 306 aaKnown RBP15.55■□□□□ 0.08
USP39-202ENST00000409025 SOD3P08294 240 aa15.54■□□□□ 0.08
USP39-202ENST00000409025 DANCRP0C864 163 aa15.54■□□□□ 0.08
USP39-202ENST00000409025 ATP6V0CP27449 155 aa15.54■□□□□ 0.08
USP39-202ENST00000409025 UQCC3Q6UW78 93 aa15.54■□□□□ 0.08
USP39-202ENST00000409025 Q6ZRG5 221 aa15.54■□□□□ 0.08
USP39-202ENST00000409025 OR4A16Q8NH70 328 aa15.54■□□□□ 0.08
USP39-202ENST00000409025 DTD1Q8TEA8 209 aa15.54■□□□□ 0.08
USP39-202ENST00000409025 HRH4Q9H3N8 390 aa15.54■□□□□ 0.08
USP39-202ENST00000409025 CRYZL1O95825 349 aa15.53■□□□□ 0.08
USP39-202ENST00000409025 IFNA5P01569 189 aa15.53■□□□□ 0.08
USP39-202ENST00000409025 DLX6P56179 175 aa15.53■□□□□ 0.08
USP39-202ENST00000409025 IL34Q6ZMJ4 242 aa15.53■□□□□ 0.08
USP39-202ENST00000409025 STPG2Q8N412 459 aa15.53■□□□□ 0.08
USP39-202ENST00000409025 GNPNAT1Q96EK6 184 aaPredicted RBP15.53■□□□□ 0.08
USP39-202ENST00000409025 QTRT1Q9BXR0 403 aaKnown RBP15.53■□□□□ 0.08
USP39-202ENST00000409025 STRAPQ9Y3F4 350 aaKnown RBP15.53■□□□□ 0.08
USP39-202ENST00000409025 CEBPZOSA8MTT3 80 aa15.53■□□□□ 0.08
USP39-202ENST00000409025 SHOXO15266 292 aa15.53■□□□□ 0.08
USP39-202ENST00000409025 AVPI1Q5T686 147 aa15.53■□□□□ 0.08
USP39-202ENST00000409025 ZNF833PQ6ZTB9 187 aa15.53■□□□□ 0.08
USP39-202ENST00000409025 DTX2Q86UW9 622 aa15.53■□□□□ 0.08
USP39-202ENST00000409025 C8orf31Q8N9H6 132 aa15.53■□□□□ 0.08
USP39-202ENST00000409025 OR2G3Q8NGZ4 309 aa15.53■□□□□ 0.08
USP39-202ENST00000409025 CACFD1Q9UGQ2 172 aa15.53■□□□□ 0.08
USP39-202ENST00000409025 GPR37O15354 613 aa15.52■□□□□ 0.07
USP39-202ENST00000409025 PRH1P02810 166 aa15.52■□□□□ 0.07
USP39-202ENST00000409025 CT45A6P0DMU7 189 aa15.52■□□□□ 0.07
USP39-202ENST00000409025 CT45A5P0DMU8 189 aa15.52■□□□□ 0.07
USP39-202ENST00000409025 CT45A7P0DMV0 189 aa15.52■□□□□ 0.07
USP39-202ENST00000409025 F2RL1P55085 397 aa15.52■□□□□ 0.07
USP39-202ENST00000409025 OR2B8PP59922 312 aa15.52■□□□□ 0.07
USP39-202ENST00000409025 PJVKQ0ZLH3 352 aa15.52■□□□□ 0.07
USP39-202ENST00000409025 AARDQ4LEZ3 155 aa15.52■□□□□ 0.07
USP39-202ENST00000409025 SLC25A24Q6NUK1 477 aa15.52■□□□□ 0.07
USP39-202ENST00000409025 TMEM14EPQ6UXP3 125 aa15.52■□□□□ 0.07
USP39-202ENST00000409025 TMEM182Q6ZP80 229 aaPredicted RBP15.52■□□□□ 0.07
USP39-202ENST00000409025 VKORC1L1Q8N0U8 176 aa15.52■□□□□ 0.07
USP39-202ENST00000409025 TIMD4Q96H15 378 aa15.52■□□□□ 0.07
USP39-202ENST00000409025 TSNAXQ99598 290 aaKnown RBP15.52■□□□□ 0.07
USP39-202ENST00000409025 TMEM140Q9NV12 185 aa15.52■□□□□ 0.07
USP39-202ENST00000409025 ZNRD1Q9P1U0 126 aa15.52■□□□□ 0.07
USP39-202ENST00000409025 IFNA17P01571 189 aa15.51■□□□□ 0.07
USP39-202ENST00000409025 CAMLGP49069 296 aa15.51■□□□□ 0.07
USP39-202ENST00000409025 RTL8BQ17RB0 113 aa15.51■□□□□ 0.07
USP39-202ENST00000409025 BTNL8Q6UX41 500 aa15.51■□□□□ 0.07
USP39-202ENST00000409025 ZNF841Q6ZN19 808 aa15.51■□□□□ 0.07
USP39-202ENST00000409025 HAPLN4Q86UW8 402 aa15.51■□□□□ 0.07
USP39-202ENST00000409025 LILRB2Q8N423 598 aa15.51■□□□□ 0.07
USP39-202ENST00000409025 LINC00311Q8N616 119 aa15.51■□□□□ 0.07
USP39-202ENST00000409025 RAB1CQ92928 201 aa15.51■□□□□ 0.07
USP39-202ENST00000409025 ZDHHC16Q969W1 377 aa15.51■□□□□ 0.07
USP39-202ENST00000409025 ITPR1Q14643 2758 aa15.51■□□□□ 0.07
USP39-202ENST00000409025 HIVEP3Q5T1R4 2406 aa15.51■□□□□ 0.07
USP39-202ENST00000409025 PKD1L2Q7Z442 2459 aa15.51■□□□□ 0.07
USP39-202ENST00000409025 TRIM77I1YAP6 450 aa15.51■□□□□ 0.07
USP39-202ENST00000409025 LY86O95711 162 aa15.51■□□□□ 0.07
USP39-202ENST00000409025 HRASP01112 189 aa15.51■□□□□ 0.07
USP39-202ENST00000409025 ARL16Q0P5N6 197 aa15.51■□□□□ 0.07
USP39-202ENST00000409025 OR10X1Q8NGY0 326 aa15.51■□□□□ 0.07
USP39-202ENST00000409025 ZNF596Q8TC21 504 aa15.51■□□□□ 0.07
USP39-202ENST00000409025 SLC35D1Q9NTN3 355 aa15.51■□□□□ 0.07
USP39-202ENST00000409025 MIOXQ9UGB7 285 aa15.51■□□□□ 0.07
USP39-202ENST00000409025 A0A087X0M5 115 aa15.5■□□□□ 0.07
USP39-202ENST00000409025 A0A1B0GX30 115 aa15.5■□□□□ 0.07
USP39-202ENST00000409025 UMAD1C9J7I0 102 aa15.5■□□□□ 0.07
USP39-202ENST00000409025 J3QR06 171 aa15.5■□□□□ 0.07
USP39-202ENST00000409025 IGHV1-8P0DP01 117 aa15.5■□□□□ 0.07
USP39-202ENST00000409025 SPCS3P61009 180 aa15.5■□□□□ 0.07
USP39-202ENST00000409025 RELBQ01201 579 aa15.5■□□□□ 0.07
USP39-202ENST00000409025 DHRS7BQ6IAN0 325 aaPredicted RBP15.5■□□□□ 0.07
USP39-202ENST00000409025 ZNF525Q8N782 197 aa15.5■□□□□ 0.07
USP39-202ENST00000409025 BPIFCQ8NFQ6 507 aa15.5■□□□□ 0.07
USP39-202ENST00000409025 OR8B3Q8NGG8 313 aa15.5■□□□□ 0.07
USP39-202ENST00000409025 OR52E5Q8NH55 327 aa15.5■□□□□ 0.07
USP39-202ENST00000409025 SCGB1C1Q8TD33 95 aa15.5■□□□□ 0.07
USP39-202ENST00000409025 RHOVQ96L33 236 aa15.5■□□□□ 0.07
USP39-202ENST00000409025 OR4C12Q96R67 309 aa15.5■□□□□ 0.07
USP39-202ENST00000409025 OR8B2Q96RD0 313 aa15.5■□□□□ 0.07
USP39-202ENST00000409025 NUP50Q9UKX7 468 aa15.5■□□□□ 0.07
USP39-202ENST00000409025 TPRP12270 2363 aaKnown RBP15.5■□□□□ 0.07
USP39-202ENST00000409025 A0A1W2PPH5 198 aa15.49■□□□□ 0.07
USP39-202ENST00000409025 PPIHO43447 177 aaKnown RBP15.49■□□□□ 0.07
USP39-202ENST00000409025 LY6HO94772 140 aa15.49■□□□□ 0.07
USP39-202ENST00000409025 SLC38A11Q08AI6 406 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms