RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 ARID1AO14497 2285 aa8.68□□□□□ -1.02
POLR2J3-201ENST00000379340 KBTBD11-OT1A0A1B0GTJ5 212 aa8.68□□□□□ -1.02
POLR2J3-201ENST00000379340 DEFB108AA8MXU0 73 aa8.68□□□□□ -1.02
POLR2J3-201ENST00000379340 FAM157AC9JC47 383 aa8.68□□□□□ -1.02
POLR2J3-201ENST00000379340 AGPAT2O15120 278 aa8.68□□□□□ -1.02
POLR2J3-201ENST00000379340 SIGLEC5O15389 551 aa8.68□□□□□ -1.02
POLR2J3-201ENST00000379340 PPIHO43447 177 aaKnown RBP8.68□□□□□ -1.02
POLR2J3-201ENST00000379340 KRASP01116 189 aa8.68□□□□□ -1.02
POLR2J3-201ENST00000379340 G6PCP35575 357 aa8.68□□□□□ -1.02
POLR2J3-201ENST00000379340 BSPH1Q075Z2 132 aa8.68□□□□□ -1.02
POLR2J3-201ENST00000379340 GUCA2BQ16661 112 aa8.68□□□□□ -1.02
POLR2J3-201ENST00000379340 IZUMO4Q1ZYL8 232 aa8.68□□□□□ -1.02
POLR2J3-201ENST00000379340 AARDQ4LEZ3 155 aa8.68□□□□□ -1.02
POLR2J3-201ENST00000379340 PRR30Q53SZ7 412 aaPredicted RBP8.68□□□□□ -1.02
POLR2J3-201ENST00000379340 LILRB2Q8N423 598 aa8.68□□□□□ -1.02
POLR2J3-201ENST00000379340 ZNF525Q8N782 197 aa8.68□□□□□ -1.02
POLR2J3-201ENST00000379340 OR10A7Q8NGE5 316 aa8.68□□□□□ -1.02
POLR2J3-201ENST00000379340 LINC00574Q9H8X3 128 aa8.68□□□□□ -1.02
POLR2J3-201ENST00000379340 CLN8Q9UBY8 286 aa8.68□□□□□ -1.02
POLR2J3-201ENST00000379340 TIMM9Q9Y5J7 89 aa8.68□□□□□ -1.02
POLR2J3-201ENST00000379340 PRRC2CQ9Y520 2896 aaKnown RBP8.68□□□□□ -1.02
POLR2J3-201ENST00000379340 TRAV38-1A0A0B4J264 116 aa8.67□□□□□ -1.02
POLR2J3-201ENST00000379340 MARCH11A6NNE9 402 aa8.67□□□□□ -1.02
POLR2J3-201ENST00000379340 LINC00473A8K010 186 aa8.67□□□□□ -1.02
POLR2J3-201ENST00000379340 H3BP45 60 aa8.67□□□□□ -1.02
POLR2J3-201ENST00000379340 TSPAN4O14817 238 aa8.67□□□□□ -1.02
POLR2J3-201ENST00000379340 CYB5R3P00387 301 aaPredicted RBP8.67□□□□□ -1.02
POLR2J3-201ENST00000379340 H2AFB1P0C5Y9 115 aa8.67□□□□□ -1.02
POLR2J3-201ENST00000379340 OR4A8P0C604 315 aa8.67□□□□□ -1.02
POLR2J3-201ENST00000379340 BRWD1-AS2P59051 145 aa8.67□□□□□ -1.02
POLR2J3-201ENST00000379340 SERF2P84101 59 aa8.67□□□□□ -1.02
POLR2J3-201ENST00000379340 C17orf58Q2M2W7 97 aa8.67□□□□□ -1.02
POLR2J3-201ENST00000379340 LRRC75BQ2VPJ9 315 aa8.67□□□□□ -1.02
POLR2J3-201ENST00000379340 OR2B11Q5JQS5 317 aa8.67□□□□□ -1.02
POLR2J3-201ENST00000379340 SPANXN5Q5MJ07 72 aa8.67□□□□□ -1.02
POLR2J3-201ENST00000379340 DHRS7BQ6IAN0 325 aaPredicted RBP8.67□□□□□ -1.02
POLR2J3-201ENST00000379340 PINX1Q96BK5 328 aaKnown RBP8.67□□□□□ -1.02
POLR2J3-201ENST00000379340 R3HDM4Q96D70 268 aa8.67□□□□□ -1.02
POLR2J3-201ENST00000379340 RBMXL1Q96E39 390 aaKnown RBP8.67□□□□□ -1.02
POLR2J3-201ENST00000379340 ADTRPQ96IZ2 230 aa8.67□□□□□ -1.02
POLR2J3-201ENST00000379340 ABHD14AQ9BUJ0 271 aa8.67□□□□□ -1.02
POLR2J3-201ENST00000379340 IFI27L2Q9H2X8 130 aa8.67□□□□□ -1.02
POLR2J3-201ENST00000379340 ESRP2Q9H6T0 727 aaKnown RBP8.67□□□□□ -1.02
POLR2J3-201ENST00000379340 TANC2Q9HCD6 1990 aa8.67□□□□□ -1.02
POLR2J3-201ENST00000379340 IDI2-AS1Q9NZ38 188 aa8.67□□□□□ -1.02
POLR2J3-201ENST00000379340 KIAA1456Q9P272 454 aa8.67□□□□□ -1.02
POLR2J3-201ENST00000379340 SH3BGRL2Q9UJC5 107 aa8.67□□□□□ -1.02
POLR2J3-201ENST00000379340 NF1P21359 2839 aa8.67□□□□□ -1.02
POLR2J3-201ENST00000379340 MTORP42345 2549 aa8.67□□□□□ -1.02
POLR2J3-201ENST00000379340 TRAV1-1A0A0B4J248 108 aa8.66□□□□□ -1.02
POLR2J3-201ENST00000379340 hADV38S2A0JD32 116 aa8.66□□□□□ -1.02
POLR2J3-201ENST00000379340 M0R1X1 148 aa8.66□□□□□ -1.02
POLR2J3-201ENST00000379340 METTL15P1P0C7V9 234 aa8.66□□□□□ -1.02
POLR2J3-201ENST00000379340 THBS3P49746 956 aa8.66□□□□□ -1.02
POLR2J3-201ENST00000379340 FHITP49789 147 aa8.66□□□□□ -1.02
POLR2J3-201ENST00000379340 ERVK-16P61578 105 aa8.66□□□□□ -1.02
POLR2J3-201ENST00000379340 MEF2CQ06413 473 aaPredicted RBP8.66□□□□□ -1.02
POLR2J3-201ENST00000379340 SLC38A11Q08AI6 406 aa8.66□□□□□ -1.02
POLR2J3-201ENST00000379340 LTC4SQ16873 150 aa8.66□□□□□ -1.02
POLR2J3-201ENST00000379340 FAM53AQ6NSI3 398 aaPredicted RBP8.66□□□□□ -1.02
POLR2J3-201ENST00000379340 THNSL2Q86YJ6 484 aa8.66□□□□□ -1.02
POLR2J3-201ENST00000379340 OR52E5Q8NH55 327 aa8.66□□□□□ -1.02
POLR2J3-201ENST00000379340 DTD1Q8TEA8 209 aa8.66□□□□□ -1.02
POLR2J3-201ENST00000379340 S1PR3Q99500 378 aa8.66□□□□□ -1.02
POLR2J3-201ENST00000379340 SCRT1Q9BWW7 348 aa8.66□□□□□ -1.02
POLR2J3-201ENST00000379340 EIF5A2Q9GZV4 153 aaKnown RBP8.66□□□□□ -1.02
POLR2J3-201ENST00000379340 UNKLQ9H9P5 680 aaKnown RBP8.66□□□□□ -1.02
POLR2J3-201ENST00000379340 RAI1Q7Z5J4 1906 aaPredicted RBP8.66□□□□□ -1.02
POLR2J3-201ENST00000379340 APCP25054 2843 aa8.66□□□□□ -1.02
POLR2J3-201ENST00000379340 DYSFO75923 2080 aa8.66□□□□□ -1.02
POLR2J3-201ENST00000379340 DSCAML1Q8TD84 2053 aa8.66□□□□□ -1.02
POLR2J3-201ENST00000379340 LOC105371267A0A1B0GV96 52 aa8.65□□□□□ -1.02
POLR2J3-201ENST00000379340 FCGR3BO75015 233 aa8.65□□□□□ -1.02
POLR2J3-201ENST00000379340 NQO2P16083 231 aa8.65□□□□□ -1.02
POLR2J3-201ENST00000379340 GRNP28799 593 aaKnown RBP8.65□□□□□ -1.02
POLR2J3-201ENST00000379340 RPP30P78346 268 aaKnown RBP8.65□□□□□ -1.02
POLR2J3-201ENST00000379340 RUNX1Q01196 453 aa8.65□□□□□ -1.02
POLR2J3-201ENST00000379340 PDLIM3Q53GG5 364 aaPredicted RBP8.65□□□□□ -1.02
POLR2J3-201ENST00000379340 FAM201AQ5SY85 155 aa8.65□□□□□ -1.02
POLR2J3-201ENST00000379340 NCMAPQ5T1S8 102 aa8.65□□□□□ -1.02
POLR2J3-201ENST00000379340 NCR3LG1Q68D85 454 aa8.65□□□□□ -1.02
POLR2J3-201ENST00000379340 SP5Q6BEB4 398 aaPredicted RBP8.65□□□□□ -1.02
POLR2J3-201ENST00000379340 HAPLN4Q86UW8 402 aa8.65□□□□□ -1.02
POLR2J3-201ENST00000379340 CLRN3Q8NCR9 226 aa8.65□□□□□ -1.02
POLR2J3-201ENST00000379340 OR4S2Q8NH73 311 aa8.65□□□□□ -1.02
POLR2J3-201ENST00000379340 CLCC1Q96S66 551 aa8.65□□□□□ -1.02
POLR2J3-201ENST00000379340 CCL13Q99616 98 aa8.65□□□□□ -1.02
POLR2J3-201ENST00000379340 TMEM147Q9BVK8 224 aa8.65□□□□□ -1.02
POLR2J3-201ENST00000379340 WDR61Q9GZS3 305 aaKnown RBP8.65□□□□□ -1.02
POLR2J3-201ENST00000379340 SLC35B3Q9H1N7 401 aa8.65□□□□□ -1.02
POLR2J3-201ENST00000379340 LINC00312Q9Y6C7 94 aa8.65□□□□□ -1.02
POLR2J3-201ENST00000379340 HIVEP1P15822 2718 aa8.65□□□□□ -1.02
POLR2J3-201ENST00000379340 FAM74A7A6NL05 159 aa8.65□□□□□ -1.03
POLR2J3-201ENST00000379340 CEBPZOSA8MTT3 80 aa8.65□□□□□ -1.03
POLR2J3-201ENST00000379340 SOX15O60248 233 aa8.65□□□□□ -1.03
POLR2J3-201ENST00000379340 ZG16O60844 167 aa8.65□□□□□ -1.03
POLR2J3-201ENST00000379340 RBMXL2O75526 392 aaKnown RBP8.65□□□□□ -1.03
POLR2J3-201ENST00000379340 GYPAP02724 150 aa8.65□□□□□ -1.03
POLR2J3-201ENST00000379340 PPT1P50897 306 aa8.65□□□□□ -1.03
POLR2J3-201ENST00000379340 SPCS3P61009 180 aa8.65□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms