RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 SPRY4Q9C004 299 aa13.96□□□□□ -0.18
PCDHA1-201ENST00000378133 STRADBQ9C0K7 418 aa13.96□□□□□ -0.18
PCDHA1-201ENST00000378133 TMEM9BQ9NQ34 198 aa13.96□□□□□ -0.18
PCDHA1-201ENST00000378133 PXMP4Q9Y6I8 212 aa13.96□□□□□ -0.18
PCDHA1-201ENST00000378133 GTF3C1Q12789 2109 aa13.96□□□□□ -0.18
PCDHA1-201ENST00000378133 DOCK11Q5JSL3 2073 aa13.96□□□□□ -0.18
PCDHA1-201ENST00000378133 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.95□□□□□ -0.18
PCDHA1-201ENST00000378133 PPP1CBP62140 327 aa13.95□□□□□ -0.18
PCDHA1-201ENST00000378133 PKIBQ9C010 78 aa13.95□□□□□ -0.18
PCDHA1-201ENST00000378133 PRRC2CQ9Y520 2896 aaKnown RBP13.95□□□□□ -0.18
PCDHA1-201ENST00000378133 LRP5LA4QPB2 252 aa13.95□□□□□ -0.18
PCDHA1-201ENST00000378133 TCF21O43680 179 aa13.95□□□□□ -0.18
PCDHA1-201ENST00000378133 OR2H2O95918 312 aa13.95□□□□□ -0.18
PCDHA1-201ENST00000378133 IRF2P14316 349 aa13.95□□□□□ -0.18
PCDHA1-201ENST00000378133 FFAR4Q5NUL3 377 aa13.95□□□□□ -0.18
PCDHA1-201ENST00000378133 TMEM14EPQ6UXP3 125 aa13.95□□□□□ -0.18
PCDHA1-201ENST00000378133 MDP1Q86V88 176 aa13.95□□□□□ -0.18
PCDHA1-201ENST00000378133 LRP11Q86VZ4 500 aa13.95□□□□□ -0.18
PCDHA1-201ENST00000378133 KMT2EQ8IZD2 1858 aa13.95□□□□□ -0.18
PCDHA1-201ENST00000378133 GPR179Q6PRD1 2367 aa13.94□□□□□ -0.18
PCDHA1-201ENST00000378133 C11orf94C9JXX5 98 aa13.94□□□□□ -0.18
PCDHA1-201ENST00000378133 J3QT63 122 aa13.94□□□□□ -0.18
PCDHA1-201ENST00000378133 CD33P20138 364 aa13.94□□□□□ -0.18
PCDHA1-201ENST00000378133 NPPCP23582 126 aa13.94□□□□□ -0.18
PCDHA1-201ENST00000378133 PARD6AQ9NPB6 346 aa13.94□□□□□ -0.18
PCDHA1-201ENST00000378133 COL27A1Q8IZC6 1860 aaPredicted RBP13.94□□□□□ -0.18
PCDHA1-201ENST00000378133 TOMM20LQ6UXN7 152 aa13.94□□□□□ -0.18
PCDHA1-201ENST00000378133 WDR86Q86TI4 376 aa13.94□□□□□ -0.18
PCDHA1-201ENST00000378133 LINC01551Q86U37 167 aa13.94□□□□□ -0.18
PCDHA1-201ENST00000378133 C22orf15Q8WYQ4 148 aa13.94□□□□□ -0.18
PCDHA1-201ENST00000378133 BTF3L4Q96K17 158 aa13.94□□□□□ -0.18
PCDHA1-201ENST00000378133 ABI3Q9P2A4 366 aa13.94□□□□□ -0.18
PCDHA1-201ENST00000378133 WNT2P09544 360 aa13.93□□□□□ -0.18
PCDHA1-201ENST00000378133 COX5AP20674 150 aa13.93□□□□□ -0.18
PCDHA1-201ENST00000378133 MLNRO43193 412 aa13.93□□□□□ -0.18
PCDHA1-201ENST00000378133 EGR1P18146 543 aa13.93□□□□□ -0.18
PCDHA1-201ENST00000378133 MPLP40238 635 aa13.93□□□□□ -0.18
PCDHA1-201ENST00000378133 SOX8P57073 446 aa13.93□□□□□ -0.18
PCDHA1-201ENST00000378133 TDRG1Q3Y452 100 aa13.93□□□□□ -0.18
PCDHA1-201ENST00000378133 ZNF497Q6ZNH5 498 aa13.93□□□□□ -0.18
PCDHA1-201ENST00000378133 TMEM144Q7Z5S9 345 aa13.93□□□□□ -0.18
PCDHA1-201ENST00000378133 FGFRL1Q8N441 504 aa13.93□□□□□ -0.18
PCDHA1-201ENST00000378133 SCCPDHQ8NBX0 429 aa13.93□□□□□ -0.18
PCDHA1-201ENST00000378133 CMTM2Q8TAZ6 248 aa13.93□□□□□ -0.18
PCDHA1-201ENST00000378133 ARRDC1-AS1Q9H2J1 176 aa13.93□□□□□ -0.18
PCDHA1-201ENST00000378133 TMEM106BQ9NUM4 274 aa13.93□□□□□ -0.18
PCDHA1-201ENST00000378133 LIN7CQ9NUP9 197 aaKnown RBP13.93□□□□□ -0.18
PCDHA1-201ENST00000378133 USF3Q68DE3 2245 aa13.93□□□□□ -0.18
PCDHA1-201ENST00000378133 A0A1W2PNU3 283 aaPredicted RBP13.92□□□□□ -0.18
PCDHA1-201ENST00000378133 NPIPB11E5RHQ5 1161 aa13.92□□□□□ -0.18
PCDHA1-201ENST00000378133 MRPL52Q86TS9 123 aaKnown RBP13.92□□□□□ -0.18
PCDHA1-201ENST00000378133 BCL2L2Q92843 193 aaPredicted RBP13.92□□□□□ -0.18
PCDHA1-201ENST00000378133 MIEN1Q9BRT3 115 aa13.92□□□□□ -0.18
PCDHA1-201ENST00000378133 CDIPTO14735 213 aa13.92□□□□□ -0.18
PCDHA1-201ENST00000378133 CD99P14209 185 aa13.92□□□□□ -0.18
PCDHA1-201ENST00000378133 MEOX1P50221 254 aa13.92□□□□□ -0.18
PCDHA1-201ENST00000378133 FOXL1Q12952 345 aa13.92□□□□□ -0.18
PCDHA1-201ENST00000378133 TMEM147Q9BVK8 224 aa13.92□□□□□ -0.18
PCDHA1-201ENST00000378133 DEFB127Q9H1M4 99 aa13.92□□□□□ -0.18
PCDHA1-201ENST00000378133 GRIFINA4D1Z8 144 aa13.92□□□□□ -0.18
PCDHA1-201ENST00000378133 FAM90A26D6RGX4 464 aa13.92□□□□□ -0.18
PCDHA1-201ENST00000378133 TNFSF13O75888 250 aa13.92□□□□□ -0.18
PCDHA1-201ENST00000378133 CRYAAP02489 173 aa13.92□□□□□ -0.18
PCDHA1-201ENST00000378133 CELA3BP08861 270 aa13.92□□□□□ -0.18
PCDHA1-201ENST00000378133 DEFA4P12838 97 aa13.92□□□□□ -0.18
PCDHA1-201ENST00000378133 SELEP16581 610 aa13.92□□□□□ -0.18
PCDHA1-201ENST00000378133 ATP6V1FQ16864 119 aa13.92□□□□□ -0.18
PCDHA1-201ENST00000378133 TCF23Q7RTU1 214 aa13.92□□□□□ -0.18
PCDHA1-201ENST00000378133 DRAM1Q8N682 238 aa13.92□□□□□ -0.18
PCDHA1-201ENST00000378133 ZNF709Q8N972 641 aa13.92□□□□□ -0.18
PCDHA1-201ENST00000378133 SGMS2Q8NHU3 365 aa13.92□□□□□ -0.18
PCDHA1-201ENST00000378133 RTL8AQ9BWD3 113 aa13.92□□□□□ -0.18
PCDHA1-201ENST00000378133 GP6Q9HCN6 339 aa13.92□□□□□ -0.18
PCDHA1-201ENST00000378133 ADMP35318 185 aa13.91□□□□□ -0.18
PCDHA1-201ENST00000378133 ALKBH6Q3KRA9 238 aa13.91□□□□□ -0.18
PCDHA1-201ENST00000378133 FBXW9Q5XUX1 488 aa13.91□□□□□ -0.18
PCDHA1-201ENST00000378133 C16orf54Q6UWD8 224 aa13.91□□□□□ -0.18
PCDHA1-201ENST00000378133 C20orf144Q9BQM9 153 aa13.91□□□□□ -0.18
PCDHA1-201ENST00000378133 OR2J1Q9GZK6 312 aa13.91□□□□□ -0.18
PCDHA1-201ENST00000378133 C1QTNF9P0C862 333 aa13.91□□□□□ -0.18
PCDHA1-201ENST00000378133 BRS3P32247 399 aa13.91□□□□□ -0.18
PCDHA1-201ENST00000378133 UBE2NP61088 152 aaKnown RBP13.91□□□□□ -0.18
PCDHA1-201ENST00000378133 TFF3Q07654 80 aa13.91□□□□□ -0.18
PCDHA1-201ENST00000378133 BATFQ16520 125 aa13.91□□□□□ -0.18
PCDHA1-201ENST00000378133 SIAH2O43255 324 aa13.9□□□□□ -0.18
PCDHA1-201ENST00000378133 NXPH2O95156 264 aa13.9□□□□□ -0.18
PCDHA1-201ENST00000378133 NDUFB4O95168 129 aa13.9□□□□□ -0.18
PCDHA1-201ENST00000378133 SP1P08047 785 aa13.9□□□□□ -0.18
PCDHA1-201ENST00000378133 HNF1AP20823 631 aa13.9□□□□□ -0.18
PCDHA1-201ENST00000378133 BMP5P22003 454 aa13.9□□□□□ -0.18
PCDHA1-201ENST00000378133 CEBPDP49716 269 aaPredicted RBP13.9□□□□□ -0.18
PCDHA1-201ENST00000378133 RPS16P62249 146 aaKnown RBP13.9□□□□□ -0.18
PCDHA1-201ENST00000378133 GNB1P62873 340 aa13.9□□□□□ -0.18
PCDHA1-201ENST00000378133 FAM53AQ6NSI3 398 aaPredicted RBP13.9□□□□□ -0.18
PCDHA1-201ENST00000378133 Q6ZWC4 215 aa13.9□□□□□ -0.18
PCDHA1-201ENST00000378133 MOB1BQ7L9L4 216 aa13.9□□□□□ -0.18
PCDHA1-201ENST00000378133 OR10P1Q8NGE3 313 aa13.9□□□□□ -0.18
PCDHA1-201ENST00000378133 LPAR2Q9HBW0 351 aa13.9□□□□□ -0.18
PCDHA1-201ENST00000378133 ELOVL5Q9NYP7 299 aa13.9□□□□□ -0.18
PCDHA1-201ENST00000378133 PAM16Q9Y3D7 125 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 118 ms