RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 CECR9P0C854 216 aa21.09■□□□□ 0.97
C9orf40-201ENST00000376854 LURAP1LQ8IV03 231 aa21.09■□□□□ 0.97
C9orf40-201ENST00000376854 DCTN5Q9BTE1 182 aa21.09■□□□□ 0.97
C9orf40-201ENST00000376854 SRD5A3Q9H8P0 318 aa21.09■□□□□ 0.97
C9orf40-201ENST00000376854 USF3Q68DE3 2245 aa21.08■□□□□ 0.97
C9orf40-201ENST00000376854 LTC4SQ16873 150 aa21.08■□□□□ 0.97
C9orf40-201ENST00000376854 FDCSPQ8NFU4 85 aa21.08■□□□□ 0.97
C9orf40-201ENST00000376854 OR4X1Q8NH49 305 aa21.08■□□□□ 0.97
C9orf40-201ENST00000376854 PFDN5Q99471 154 aa21.08■□□□□ 0.97
C9orf40-201ENST00000376854 QTRT1Q9BXR0 403 aaKnown RBP21.08■□□□□ 0.97
C9orf40-201ENST00000376854 DMXL1Q9Y485 3027 aa21.08■□□□□ 0.96
C9orf40-201ENST00000376854 H7BYZ3 331 aa21.07■□□□□ 0.96
C9orf40-201ENST00000376854 PAGE4O60829 102 aa21.07■□□□□ 0.96
C9orf40-201ENST00000376854 CD177Q8N6Q3 437 aa21.07■□□□□ 0.96
C9orf40-201ENST00000376854 R3HDM4Q96D70 268 aa21.07■□□□□ 0.96
C9orf40-201ENST00000376854 GAB2Q9UQC2 676 aa21.07■□□□□ 0.96
C9orf40-201ENST00000376854 ZNF729A6NN14 1252 aaPredicted RBP21.07■□□□□ 0.96
C9orf40-201ENST00000376854 DEFA4P12838 97 aa21.07■□□□□ 0.96
C9orf40-201ENST00000376854 WT1P19544 449 aaPredicted RBP21.07■□□□□ 0.96
C9orf40-201ENST00000376854 GCH1P30793 250 aa21.07■□□□□ 0.96
C9orf40-201ENST00000376854 GALR1P47211 349 aa21.07■□□□□ 0.96
C9orf40-201ENST00000376854 FOXF2Q12947 444 aa21.07■□□□□ 0.96
C9orf40-201ENST00000376854 EDDM3AQ14507 147 aa21.07■□□□□ 0.96
C9orf40-201ENST00000376854 C9orf106Q8NAJ2 232 aa21.07■□□□□ 0.96
C9orf40-201ENST00000376854 C1orf162Q8NEQ5 155 aaPredicted RBP21.07■□□□□ 0.96
C9orf40-201ENST00000376854 OR5B12Q96R08 314 aa21.07■□□□□ 0.96
C9orf40-201ENST00000376854 PYGO2Q9BRQ0 406 aa21.07■□□□□ 0.96
C9orf40-201ENST00000376854 SPAARA0A1B0GVQ0 90 aa21.06■□□□□ 0.96
C9orf40-201ENST00000376854 C15orf62A8K5M9 175 aa21.06■□□□□ 0.96
C9orf40-201ENST00000376854 C15orf65H3BRN8 121 aa21.06■□□□□ 0.96
C9orf40-201ENST00000376854 TUBG1P23258 451 aa21.06■□□□□ 0.96
C9orf40-201ENST00000376854 ZNF718Q3SXZ3 478 aa21.06■□□□□ 0.96
C9orf40-201ENST00000376854 C9orf152Q5JTZ5 239 aa21.06■□□□□ 0.96
C9orf40-201ENST00000376854 DEFB124Q8NES8 71 aa21.06■□□□□ 0.96
C9orf40-201ENST00000376854 OR51G1Q8NGK1 321 aa21.06■□□□□ 0.96
C9orf40-201ENST00000376854 PITPNC1Q9UKF7 332 aa21.06■□□□□ 0.96
C9orf40-201ENST00000376854 PRR14LQ5THK1 2151 aa21.06■□□□□ 0.96
C9orf40-201ENST00000376854 ADH4P08319 380 aa21.06■□□□□ 0.96
C9orf40-201ENST00000376854 HTD2P86397 168 aa21.06■□□□□ 0.96
C9orf40-201ENST00000376854 LRRC29Q8WV35 223 aa21.06■□□□□ 0.96
C9orf40-201ENST00000376854 OR9G9P0C7N8 305 aa21.05■□□□□ 0.96
C9orf40-201ENST00000376854 RTP5Q14D33 572 aa21.05■□□□□ 0.96
C9orf40-201ENST00000376854 ACOT6Q3I5F7 207 aaPredicted RBP21.05■□□□□ 0.96
C9orf40-201ENST00000376854 NEIL1Q96FI4 390 aaPredicted RBP21.05■□□□□ 0.96
C9orf40-201ENST00000376854 TUBG2Q9NRH3 451 aa21.05■□□□□ 0.96
C9orf40-201ENST00000376854 CACNA1DQ01668 2161 aa21.05■□□□□ 0.96
C9orf40-201ENST00000376854 NDUFS6O75380 124 aaKnown RBP21.05■□□□□ 0.96
C9orf40-201ENST00000376854 GPR12P47775 334 aa21.05■□□□□ 0.96
C9orf40-201ENST00000376854 CDC34P49427 236 aaPredicted RBP21.05■□□□□ 0.96
C9orf40-201ENST00000376854 TRAT1Q6PIZ9 186 aa21.05■□□□□ 0.96
C9orf40-201ENST00000376854 ZMAT5Q9UDW3 170 aaKnown RBP21.05■□□□□ 0.96
C9orf40-201ENST00000376854 HIST1H1BP16401 226 aaKnown RBP21.04■□□□□ 0.96
C9orf40-201ENST00000376854 PRDX2P32119 198 aa21.04■□□□□ 0.96
C9orf40-201ENST00000376854 PLPPR2Q96GM1 343 aa21.04■□□□□ 0.96
C9orf40-201ENST00000376854 PACRGQ96M98 296 aaPredicted RBP21.04■□□□□ 0.96
C9orf40-201ENST00000376854 GYPAP02724 150 aa21.04■□□□□ 0.96
C9orf40-201ENST00000376854 GZMHP20718 246 aa21.04■□□□□ 0.96
C9orf40-201ENST00000376854 DUTP33316 252 aaKnown RBP21.04■□□□□ 0.96
C9orf40-201ENST00000376854 HIST1H2BLQ99880 126 aa21.04■□□□□ 0.96
C9orf40-201ENST00000376854 PRDM13Q9H4Q3 707 aa21.04■□□□□ 0.96
C9orf40-201ENST00000376854 OR6C3Q9NZP0 311 aa21.04■□□□□ 0.96
C9orf40-201ENST00000376854 OTOGLQ3ZCN5 2332 aa21.04■□□□□ 0.96
C9orf40-201ENST00000376854 BOD1L1Q8NFC6 3051 aa21.03■□□□□ 0.96
C9orf40-201ENST00000376854 FCGR3BO75015 233 aa21.03■□□□□ 0.96
C9orf40-201ENST00000376854 CD1BP29016 333 aa21.03■□□□□ 0.96
C9orf40-201ENST00000376854 PIP4P1Q86T03 277 aa21.03■□□□□ 0.96
C9orf40-201ENST00000376854 TGIF2LYQ8IUE0 185 aa21.03■□□□□ 0.96
C9orf40-201ENST00000376854 ELOVL1Q9BW60 279 aa21.03■□□□□ 0.96
C9orf40-201ENST00000376854 PARD6AQ9NPB6 346 aa21.03■□□□□ 0.96
C9orf40-201ENST00000376854 GFOD1Q9NXC2 390 aa21.03■□□□□ 0.96
C9orf40-201ENST00000376854 IGHV2OR16-5A0A0B4J2B6 119 aa21.03■□□□□ 0.96
C9orf40-201ENST00000376854 C11orf94C9JXX5 98 aa21.03■□□□□ 0.96
C9orf40-201ENST00000376854 PPP5D1E7EU14 171 aa21.03■□□□□ 0.96
C9orf40-201ENST00000376854 MBNL2Q5VZF2 373 aaKnown RBP21.03■□□□□ 0.96
C9orf40-201ENST00000376854 Q8N7P7 452 aa21.03■□□□□ 0.96
C9orf40-201ENST00000376854 ANAPC16Q96DE5 110 aa21.03■□□□□ 0.96
C9orf40-201ENST00000376854 DIRC2Q96SL1 478 aa21.03■□□□□ 0.96
C9orf40-201ENST00000376854 GNG12Q9UBI6 72 aa21.03■□□□□ 0.96
C9orf40-201ENST00000376854 WDR83OSQ9Y284 106 aa21.03■□□□□ 0.96
C9orf40-201ENST00000376854 DOCK11Q5JSL3 2073 aa21.02■□□□□ 0.96
C9orf40-201ENST00000376854 PROP1O75360 226 aa21.02■□□□□ 0.96
C9orf40-201ENST00000376854 HRASP01112 189 aa21.02■□□□□ 0.96
C9orf40-201ENST00000376854 PAX5Q02548 391 aa21.02■□□□□ 0.96
C9orf40-201ENST00000376854 SSX9Q7RTT3 188 aa21.02■□□□□ 0.96
C9orf40-201ENST00000376854 AQP7O14520 342 aa21.01■□□□□ 0.95
C9orf40-201ENST00000376854 IGLV1-44P01699 117 aa21.01■□□□□ 0.95
C9orf40-201ENST00000376854 FTH1P19P0C7X4 201 aa21.01■□□□□ 0.95
C9orf40-201ENST00000376854 CLEC12BQ2HXU8 276 aa21.01■□□□□ 0.95
C9orf40-201ENST00000376854 TMEM183AQ8IXX5 376 aa21.01■□□□□ 0.95
C9orf40-201ENST00000376854 PCGF1Q9BSM1 259 aa21.01■□□□□ 0.95
C9orf40-201ENST00000376854 IGHV1-18A0A0C4DH31 117 aa21.01■□□□□ 0.95
C9orf40-201ENST00000376854 SMCO3A2RU48 225 aa21.01■□□□□ 0.95
C9orf40-201ENST00000376854 HPRT1P00492 218 aa21.01■□□□□ 0.95
C9orf40-201ENST00000376854 GCSAMLQ5JQS6 135 aa21.01■□□□□ 0.95
C9orf40-201ENST00000376854 OR2Z1Q8NG97 314 aa21.01■□□□□ 0.95
C9orf40-201ENST00000376854 EGR1P18146 543 aa21■□□□□ 0.95
C9orf40-201ENST00000376854 NPPCP23582 126 aa21■□□□□ 0.95
C9orf40-201ENST00000376854 PRAMEF5Q5TYX0 476 aa21■□□□□ 0.95
C9orf40-201ENST00000376854 TRAV38-1A0A0B4J264 116 aa21■□□□□ 0.95
C9orf40-201ENST00000376854 A0A1W2PPQ1 181 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms