RNA–Protein interactions for RNA: ENST00000376545.7

ABCF1-202, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ABCF1, Length 3,131 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-202ENST00000376545 CD177Q8N6Q3 437 aa8.89□□□□□ -0.99
ABCF1-202ENST00000376545 OR10D4PQ8NGN7 298 aa8.89□□□□□ -0.99
ABCF1-202ENST00000376545 OR4X1Q8NH49 305 aa8.89□□□□□ -0.99
ABCF1-202ENST00000376545 RAB1CQ92928 201 aa8.89□□□□□ -0.99
ABCF1-202ENST00000376545 NINJ1Q92982 152 aa8.89□□□□□ -0.99
ABCF1-202ENST00000376545 C14orf144Q96I85 54 aa8.89□□□□□ -0.99
ABCF1-202ENST00000376545 PITPNC1Q9UKF7 332 aa8.89□□□□□ -0.99
ABCF1-202ENST00000376545 SMCO3A2RU48 225 aa8.88□□□□□ -0.99
ABCF1-202ENST00000376545 SLC31A2O15432 143 aa8.88□□□□□ -0.99
ABCF1-202ENST00000376545 SOX15O60248 233 aa8.88□□□□□ -0.99
ABCF1-202ENST00000376545 VENTXO95231 258 aa8.88□□□□□ -0.99
ABCF1-202ENST00000376545 SSTR5P35346 364 aa8.88□□□□□ -0.99
ABCF1-202ENST00000376545 PMP22Q01453 160 aa8.88□□□□□ -0.99
ABCF1-202ENST00000376545 FOXF2Q12947 444 aa8.88□□□□□ -0.99
ABCF1-202ENST00000376545 BTNL3Q6UXE8 466 aa8.88□□□□□ -0.99
ABCF1-202ENST00000376545 CXorf67Q86X51 503 aaPredicted RBP8.88□□□□□ -0.99
ABCF1-202ENST00000376545 TGIF2LXQ8IUE1 241 aa8.88□□□□□ -0.99
ABCF1-202ENST00000376545 C1orf174Q8IYL3 243 aa8.88□□□□□ -0.99
ABCF1-202ENST00000376545 ZNF383Q8NA42 475 aa8.88□□□□□ -0.99
ABCF1-202ENST00000376545 RAB24Q969Q5 203 aa8.88□□□□□ -0.99
ABCF1-202ENST00000376545 ANAPC16Q96DE5 110 aa8.88□□□□□ -0.99
ABCF1-202ENST00000376545 SLC25A22Q9H936 323 aa8.88□□□□□ -0.99
ABCF1-202ENST00000376545 URB1O60287 2271 aaKnown RBP8.88□□□□□ -0.99
ABCF1-202ENST00000376545 MARCH11A6NNE9 402 aa8.88□□□□□ -0.99
ABCF1-202ENST00000376545 AQP7O14520 342 aa8.88□□□□□ -0.99
ABCF1-202ENST00000376545 GZMHP20718 246 aa8.88□□□□□ -0.99
ABCF1-202ENST00000376545 PRAMEF6Q5VXH4 476 aa8.88□□□□□ -0.99
ABCF1-202ENST00000376545 UNQ6494/PRO21346Q6UXR6 183 aa8.88□□□□□ -0.99
ABCF1-202ENST00000376545 TMPRSS7Q7RTY8 843 aa8.88□□□□□ -0.99
ABCF1-202ENST00000376545 GCNT2Q8N0V5 402 aa8.88□□□□□ -0.99
ABCF1-202ENST00000376545 GATAD1Q8WUU5 269 aa8.88□□□□□ -0.99
ABCF1-202ENST00000376545 WDR83OSQ9Y284 106 aa8.88□□□□□ -0.99
ABCF1-202ENST00000376545 PRSS46E5RG02 174 aa8.87□□□□□ -0.99
ABCF1-202ENST00000376545 AGFG2O95081 481 aa8.87□□□□□ -0.99
ABCF1-202ENST00000376545 CECR9P0C854 216 aa8.87□□□□□ -0.99
ABCF1-202ENST00000376545 PAX1P15863 534 aa8.87□□□□□ -0.99
ABCF1-202ENST00000376545 DUTP33316 252 aaKnown RBP8.87□□□□□ -0.99
ABCF1-202ENST00000376545 GABRA2P47869 451 aa8.87□□□□□ -0.99
ABCF1-202ENST00000376545 PDLIM4P50479 330 aa8.87□□□□□ -0.99
ABCF1-202ENST00000376545 TMPRSS3P57727 454 aa8.87□□□□□ -0.99
ABCF1-202ENST00000376545 SPCS3P61009 180 aa8.87□□□□□ -0.99
ABCF1-202ENST00000376545 ADIRFQ15847 76 aa8.87□□□□□ -0.99
ABCF1-202ENST00000376545 SMIM21Q3B7S5 101 aa8.87□□□□□ -0.99
ABCF1-202ENST00000376545 OR52E5Q8NH55 327 aa8.87□□□□□ -0.99
ABCF1-202ENST00000376545 RNASEH2CQ8TDP1 164 aaKnown RBP8.87□□□□□ -0.99
ABCF1-202ENST00000376545 TRIB1Q96RU8 372 aa8.87□□□□□ -0.99
ABCF1-202ENST00000376545 PLSCR4Q9NRQ2 329 aa8.87□□□□□ -0.99
ABCF1-202ENST00000376545 WASF3Q9UPY6 502 aa8.87□□□□□ -0.99
ABCF1-202ENST00000376545 USF3Q68DE3 2245 aa8.87□□□□□ -0.99
ABCF1-202ENST00000376545 C17orf112F2Z3M2 114 aa8.87□□□□□ -0.99
ABCF1-202ENST00000376545 TFF1P04155 84 aa8.87□□□□□ -0.99
ABCF1-202ENST00000376545 TYMSP04818 313 aa8.87□□□□□ -0.99
ABCF1-202ENST00000376545 OR9G9P0C7N8 305 aa8.87□□□□□ -0.99
ABCF1-202ENST00000376545 NPPCP23582 126 aa8.87□□□□□ -0.99
ABCF1-202ENST00000376545 LINC00205P59089 165 aa8.87□□□□□ -0.99
ABCF1-202ENST00000376545 TAS2R60P59551 318 aa8.87□□□□□ -0.99
ABCF1-202ENST00000376545 TMEM183AQ8IXX5 376 aa8.87□□□□□ -0.99
ABCF1-202ENST00000376545 FAM169BQ8N8A8 192 aa8.87□□□□□ -0.99
ABCF1-202ENST00000376545 HIST1H2BLQ99880 126 aa8.87□□□□□ -0.99
ABCF1-202ENST00000376545 QTRT1Q9BXR0 403 aaKnown RBP8.87□□□□□ -0.99
ABCF1-202ENST00000376545 OR6C3Q9NZP0 311 aa8.87□□□□□ -0.99
ABCF1-202ENST00000376545 AHCTF1Q8WYP5 2266 aa8.87□□□□□ -0.99
ABCF1-202ENST00000376545 GGCTO75223 188 aaKnown RBP8.87□□□□□ -0.99
ABCF1-202ENST00000376545 CFHR2P36980 270 aa8.87□□□□□ -0.99
ABCF1-202ENST00000376545 PRO1933Q9H354 126 aa8.87□□□□□ -0.99
ABCF1-202ENST00000376545 HMGB3O15347 200 aaKnown RBP8.86□□□□□ -0.99
ABCF1-202ENST00000376545 TMPRSS2O15393 492 aa8.86□□□□□ -0.99
ABCF1-202ENST00000376545 RBFOX2O43251 390 aaKnown RBP eCLIP8.86□□□□□ -0.992e-8■■■■□ 20.3
ABCF1-202ENST00000376545 YPEL1O60688 119 aa8.86□□□□□ -0.99
ABCF1-202ENST00000376545 HPRT1P00492 218 aa8.86□□□□□ -0.99
ABCF1-202ENST00000376545 CD82P27701 267 aa8.86□□□□□ -0.99
ABCF1-202ENST00000376545 MORN2Q502X0 79 aa8.86□□□□□ -0.99
ABCF1-202ENST00000376545 VWA1Q6PCB0 445 aa8.86□□□□□ -0.99
ABCF1-202ENST00000376545 C9orf106Q8NAJ2 232 aa8.86□□□□□ -0.99
ABCF1-202ENST00000376545 RPUSD4Q96CM3 377 aaKnown RBP8.86□□□□□ -0.99
ABCF1-202ENST00000376545 R3HDM4Q96D70 268 aa8.86□□□□□ -0.99
ABCF1-202ENST00000376545 NEIL1Q96FI4 390 aaPredicted RBP8.86□□□□□ -0.99
ABCF1-202ENST00000376545 YPEL2Q96QA6 119 aa8.86□□□□□ -0.99
ABCF1-202ENST00000376545 GAB2Q9UQC2 676 aa8.86□□□□□ -0.99
ABCF1-202ENST00000376545 IGHV2OR16-5A0A0B4J2B6 119 aa8.86□□□□□ -0.99
ABCF1-202ENST00000376545 SPINT2O43291 252 aa8.86□□□□□ -0.99
ABCF1-202ENST00000376545 TIMM8AO60220 97 aaPredicted RBP8.86□□□□□ -0.99
ABCF1-202ENST00000376545 HRASP01112 189 aa8.86□□□□□ -0.99
ABCF1-202ENST00000376545 VDAC2P45880 294 aaPredicted RBP8.86□□□□□ -0.99
ABCF1-202ENST00000376545 GALR1P47211 349 aa8.86□□□□□ -0.99
ABCF1-202ENST00000376545 TRIP6Q15654 476 aaKnown RBP8.86□□□□□ -0.99
ABCF1-202ENST00000376545 ACOT6Q3I5F7 207 aaPredicted RBP8.86□□□□□ -0.99
ABCF1-202ENST00000376545 ZNF718Q3SXZ3 478 aa8.86□□□□□ -0.99
ABCF1-202ENST00000376545 OR4F5Q8NH21 305 aa8.86□□□□□ -0.99
ABCF1-202ENST00000376545 OR5R1Q8NH85 324 aa8.86□□□□□ -0.99
ABCF1-202ENST00000376545 Q8TCH9 128 aa8.86□□□□□ -0.99
ABCF1-202ENST00000376545 MISP3Q96FF7 219 aa8.86□□□□□ -0.99
ABCF1-202ENST00000376545 OR4F4Q96R69 305 aa8.86□□□□□ -0.99
ABCF1-202ENST00000376545 ATG101Q9BSB4 218 aa8.86□□□□□ -0.99
ABCF1-202ENST00000376545 JPT1Q9UK76 154 aa8.86□□□□□ -0.99
ABCF1-202ENST00000376545 PSG11Q9UQ72 335 aa8.86□□□□□ -0.99
ABCF1-202ENST00000376545 IGHV3-43A0A0B4J1X8 118 aa8.85□□□□□ -0.99
ABCF1-202ENST00000376545 IGHV1-18A0A0C4DH31 117 aa8.85□□□□□ -0.99
ABCF1-202ENST00000376545 SRRM5B3KS81 715 aa8.85□□□□□ -0.99
ABCF1-202ENST00000376545 F2RL2O00254 374 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms