RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 TIMM23BQ5SRD1 257 aa10.11□□□□□ -0.79
DEPDC1-201ENST00000370966 RTN4RQ9BZR6 473 aa10.11□□□□□ -0.79
DEPDC1-201ENST00000370966 ROS1P08922 2347 aa10.11□□□□□ -0.79
DEPDC1-201ENST00000370966 OR2T8A6NH00 312 aa10.11□□□□□ -0.79
DEPDC1-201ENST00000370966 LINC00869P0C866 280 aa10.11□□□□□ -0.79
DEPDC1-201ENST00000370966 FDCSPQ8NFU4 85 aa10.11□□□□□ -0.79
DEPDC1-201ENST00000370966 CISD1Q9NZ45 108 aaKnown RBP10.11□□□□□ -0.79
DEPDC1-201ENST00000370966 TCF19Q9Y242 345 aa10.11□□□□□ -0.79
DEPDC1-201ENST00000370966 A0A087X0M5 115 aa10.11□□□□□ -0.79
DEPDC1-201ENST00000370966 A0A1B0GX30 115 aa10.11□□□□□ -0.79
DEPDC1-201ENST00000370966 M0R2Z0 102 aa10.11□□□□□ -0.79
DEPDC1-201ENST00000370966 DLL1O00548 723 aa10.11□□□□□ -0.79
DEPDC1-201ENST00000370966 S1PR2O95136 353 aa10.11□□□□□ -0.79
DEPDC1-201ENST00000370966 ATP1A1-AS1Q5TC04 95 aa10.11□□□□□ -0.79
DEPDC1-201ENST00000370966 ABLIM2Q6H8Q1 611 aa10.11□□□□□ -0.79
DEPDC1-201ENST00000370966 C11orf42Q8N5U0 333 aa10.11□□□□□ -0.79
DEPDC1-201ENST00000370966 FAM222BQ8WU58 562 aa10.11□□□□□ -0.79
DEPDC1-201ENST00000370966 SCNM1Q9BWG6 230 aa10.11□□□□□ -0.79
DEPDC1-201ENST00000370966 HIGD1AQ9Y241 93 aa10.11□□□□□ -0.79
DEPDC1-201ENST00000370966 MSGN1A6NI15 193 aa10.1□□□□□ -0.79
DEPDC1-201ENST00000370966 ZG16O60844 167 aa10.1□□□□□ -0.79
DEPDC1-201ENST00000370966 OR2J3O76001 311 aa10.1□□□□□ -0.79
DEPDC1-201ENST00000370966 KBTBD11O94819 623 aa10.1□□□□□ -0.79
DEPDC1-201ENST00000370966 CELA3AP09093 270 aa10.1□□□□□ -0.79
DEPDC1-201ENST00000370966 OR5R1Q8NH85 324 aa10.1□□□□□ -0.79
DEPDC1-201ENST00000370966 RTBDNQ9BSG5 229 aaPredicted RBP10.1□□□□□ -0.79
DEPDC1-201ENST00000370966 AURKAIP1Q9NWT8 199 aaPredicted RBP10.1□□□□□ -0.79
DEPDC1-201ENST00000370966 A8MWL6 223 aa10.1□□□□□ -0.79
DEPDC1-201ENST00000370966 HIST1H1BP16401 226 aaKnown RBP10.1□□□□□ -0.79
DEPDC1-201ENST00000370966 PCP4P48539 62 aa10.1□□□□□ -0.79
DEPDC1-201ENST00000370966 C2orf68Q2NKX9 166 aa10.1□□□□□ -0.79
DEPDC1-201ENST00000370966 WDFY1Q8IWB7 410 aa10.1□□□□□ -0.79
DEPDC1-201ENST00000370966 FAM89BQ8N5H3 189 aa10.1□□□□□ -0.79
DEPDC1-201ENST00000370966 SLC25A28Q96A46 364 aa10.1□□□□□ -0.79
DEPDC1-201ENST00000370966 C19orf24Q9BVV8 132 aa10.1□□□□□ -0.79
DEPDC1-201ENST00000370966 INTS1Q8N201 2190 aaKnown RBP10.1□□□□□ -0.79
DEPDC1-201ENST00000370966 H0YL77 283 aa10.1□□□□□ -0.79
DEPDC1-201ENST00000370966 MST1P26927 711 aa10.1□□□□□ -0.79
DEPDC1-201ENST00000370966 WNT5AP41221 380 aa10.1□□□□□ -0.79
DEPDC1-201ENST00000370966 PRR7Q8TB68 274 aa10.1□□□□□ -0.79
DEPDC1-201ENST00000370966 ZNF837Q96EG3 531 aaPredicted RBP10.1□□□□□ -0.79
DEPDC1-201ENST00000370966 ZSWIM8A7E2V4 1837 aa10.1□□□□□ -0.79
DEPDC1-201ENST00000370966 RNF222A6NCQ9 220 aa10.09□□□□□ -0.79
DEPDC1-201ENST00000370966 TMEM250H0YL14 139 aa10.09□□□□□ -0.79
DEPDC1-201ENST00000370966 M0R143 59 aa10.09□□□□□ -0.79
DEPDC1-201ENST00000370966 MPZP25189 248 aa10.09□□□□□ -0.79
DEPDC1-201ENST00000370966 ZFP36L1Q07352 338 aaKnown RBP10.09□□□□□ -0.79
DEPDC1-201ENST00000370966 MIC13Q5XKP0 118 aa10.09□□□□□ -0.79
DEPDC1-201ENST00000370966 TMEM171Q8WVE6 324 aa10.09□□□□□ -0.79
DEPDC1-201ENST00000370966 ZNF430Q9H8G1 570 aaPredicted RBP10.09□□□□□ -0.79
DEPDC1-201ENST00000370966 KLK2P20151 261 aa10.09□□□□□ -0.79
DEPDC1-201ENST00000370966 CSRP2Q16527 193 aa10.09□□□□□ -0.79
DEPDC1-201ENST00000370966 FAM131CQ96AQ9 280 aa10.09□□□□□ -0.79
DEPDC1-201ENST00000370966 SH3BGRL3Q9H299 93 aa10.09□□□□□ -0.79
DEPDC1-201ENST00000370966 VWA8A3KMH1 1905 aa10.09□□□□□ -0.79
DEPDC1-201ENST00000370966 ZNF646O15015 1829 aaPredicted RBP10.09□□□□□ -0.79
DEPDC1-201ENST00000370966 A8MXK9 166 aa10.09□□□□□ -0.79
DEPDC1-201ENST00000370966 OR9G1Q8NH87 305 aa10.09□□□□□ -0.79
DEPDC1-201ENST00000370966 FAM216AQ8WUB2 273 aa10.09□□□□□ -0.79
DEPDC1-201ENST00000370966 TMEM186Q96B77 213 aa10.09□□□□□ -0.79
DEPDC1-201ENST00000370966 MEGF10Q96KG7 1140 aa10.09□□□□□ -0.79
DEPDC1-201ENST00000370966 GSX1Q9H4S2 264 aaPredicted RBP10.09□□□□□ -0.79
DEPDC1-201ENST00000370966 SIGLEC5O15389 551 aa10.09□□□□□ -0.79
DEPDC1-201ENST00000370966 TNFSF10P50591 281 aa10.09□□□□□ -0.79
DEPDC1-201ENST00000370966 MFAP2P55001 183 aa10.09□□□□□ -0.79
DEPDC1-201ENST00000370966 CFHR1Q03591 330 aa10.09□□□□□ -0.79
DEPDC1-201ENST00000370966 IZUMO4Q1ZYL8 232 aa10.09□□□□□ -0.79
DEPDC1-201ENST00000370966 ZNF788Q6ZQV5 615 aa10.09□□□□□ -0.79
DEPDC1-201ENST00000370966 OR4C13Q8NGP0 309 aa10.09□□□□□ -0.79
DEPDC1-201ENST00000370966 GTF3AQ92664 365 aaKnown RBP10.09□□□□□ -0.79
DEPDC1-201ENST00000370966 RPL30P62888 115 aaKnown RBP10.08□□□□□ -0.8
DEPDC1-201ENST00000370966 UBTD1Q9HAC8 227 aa10.08□□□□□ -0.8
DEPDC1-201ENST00000370966 RPRMQ9NS64 109 aa10.08□□□□□ -0.8
DEPDC1-201ENST00000370966 BET1LQ9NYM9 111 aa10.08□□□□□ -0.8
DEPDC1-201ENST00000370966 IGKV1-9A0A0C4DH69 117 aa10.08□□□□□ -0.8
DEPDC1-201ENST00000370966 C12orf77C9JDV5 145 aa10.08□□□□□ -0.8
DEPDC1-201ENST00000370966 APCSP02743 223 aa10.08□□□□□ -0.8
DEPDC1-201ENST00000370966 TRGC2P03986 189 aa10.08□□□□□ -0.8
DEPDC1-201ENST00000370966 CSN3P07498 182 aa10.08□□□□□ -0.8
DEPDC1-201ENST00000370966 LINC00271P0C7V0 271 aa10.08□□□□□ -0.8
DEPDC1-201ENST00000370966 PAFAH1B2P68402 229 aa10.08□□□□□ -0.8
DEPDC1-201ENST00000370966 OR2D3Q8NGH3 330 aa10.08□□□□□ -0.8
DEPDC1-201ENST00000370966 CARHSP1Q9Y2V2 147 aaKnown RBP10.08□□□□□ -0.8
DEPDC1-201ENST00000370966 MDC1Q14676 2089 aaKnown RBP10.08□□□□□ -0.8
DEPDC1-201ENST00000370966 A0A0G2JMM0 328 aa10.08□□□□□ -0.8
DEPDC1-201ENST00000370966 A0A1W2PPB8 328 aa10.08□□□□□ -0.8
DEPDC1-201ENST00000370966 A0A1W2PRS3 328 aa10.08□□□□□ -0.8
DEPDC1-201ENST00000370966 KIR3DP1A8MWS1 328 aa10.08□□□□□ -0.8
DEPDC1-201ENST00000370966 CECR9P0C854 216 aa10.08□□□□□ -0.8
DEPDC1-201ENST00000370966 C8orf88P0DMB2 117 aa10.08□□□□□ -0.8
DEPDC1-201ENST00000370966 SNRNP40Q96DI7 357 aaKnown RBP10.08□□□□□ -0.8
DEPDC1-201ENST00000370966 STARD4Q96DR4 205 aa10.08□□□□□ -0.8
DEPDC1-201ENST00000370966 IL36RNQ9UBH0 155 aa10.08□□□□□ -0.8
DEPDC1-201ENST00000370966 TRAV14DV4A0A0A6YYC5 116 aa10.07□□□□□ -0.8
DEPDC1-201ENST00000370966 DNASE2O00115 360 aaPredicted RBP10.07□□□□□ -0.8
DEPDC1-201ENST00000370966 SSTR5P35346 364 aa10.07□□□□□ -0.8
DEPDC1-201ENST00000370966 ACP7Q6ZNF0 438 aa10.07□□□□□ -0.8
DEPDC1-201ENST00000370966 EIF4E3Q8N5X7 224 aaKnown RBP10.07□□□□□ -0.8
DEPDC1-201ENST00000370966 DNAJC4Q9NNZ3 241 aa10.07□□□□□ -0.8
DEPDC1-201ENST00000370966 ORM1P02763 201 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 145 ms