RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 OR10A7Q8NGE5 316 aa11.62□□□□□ -0.55
USF1-202ENST00000368020 OR52E5Q8NH55 327 aa11.62□□□□□ -0.55
USF1-202ENST00000368020 CORO2AQ92828 525 aa11.62□□□□□ -0.55
USF1-202ENST00000368020 ABHD14AQ9BUJ0 271 aa11.62□□□□□ -0.55
USF1-202ENST00000368020 WDR61Q9GZS3 305 aaKnown RBP11.62□□□□□ -0.55
USF1-202ENST00000368020 GFOD1Q9NXC2 390 aa11.62□□□□□ -0.55
USF1-202ENST00000368020 DSCAMO60469 2012 aa11.62□□□□□ -0.55
USF1-202ENST00000368020 DYSFO75923 2080 aa11.61□□□□□ -0.55
USF1-202ENST00000368020 DEFB108AA8MXU0 73 aa11.61□□□□□ -0.55
USF1-202ENST00000368020 C9JQL5 133 aa11.61□□□□□ -0.55
USF1-202ENST00000368020 BRWD1-AS2P59051 145 aa11.61□□□□□ -0.55
USF1-202ENST00000368020 HOXA4Q00056 320 aaPredicted RBP11.61□□□□□ -0.55
USF1-202ENST00000368020 FLI1Q01543 452 aaPredicted RBP11.61□□□□□ -0.55
USF1-202ENST00000368020 C4orf17Q53FE4 359 aa11.61□□□□□ -0.55
USF1-202ENST00000368020 KHDC3LQ587J8 217 aa11.61□□□□□ -0.55
USF1-202ENST00000368020 TMEM41BQ5BJD5 291 aa11.61□□□□□ -0.55
USF1-202ENST00000368020 SOHLH1Q5JUK2 328 aa11.61□□□□□ -0.55
USF1-202ENST00000368020 SP5Q6BEB4 398 aaPredicted RBP11.61□□□□□ -0.55
USF1-202ENST00000368020 SPSB3Q6PJ21 355 aa11.61□□□□□ -0.55
USF1-202ENST00000368020 ZNF788Q6ZQV5 615 aa11.61□□□□□ -0.55
USF1-202ENST00000368020 CENPVQ7Z7K6 275 aaPredicted RBP11.61□□□□□ -0.55
USF1-202ENST00000368020 WFDC8Q8IUA0 241 aa11.61□□□□□ -0.55
USF1-202ENST00000368020 OR4S2Q8NH73 311 aa11.61□□□□□ -0.55
USF1-202ENST00000368020 SFT2D1Q8WV19 159 aa11.61□□□□□ -0.55
USF1-202ENST00000368020 S1PR3Q99500 378 aa11.61□□□□□ -0.55
USF1-202ENST00000368020 FBXO7Q9Y3I1 522 aa11.61□□□□□ -0.55
USF1-202ENST00000368020 TRAV38-1A0A0B4J264 116 aa11.6□□□□□ -0.55
USF1-202ENST00000368020 CEBPZOSA8MTT3 80 aa11.6□□□□□ -0.55
USF1-202ENST00000368020 C17orf100A8MU93 164 aa11.6□□□□□ -0.55
USF1-202ENST00000368020 M0R1X1 148 aa11.6□□□□□ -0.55
USF1-202ENST00000368020 NQO2P16083 231 aa11.6□□□□□ -0.55
USF1-202ENST00000368020 CHRNB4P30926 498 aa11.6□□□□□ -0.55
USF1-202ENST00000368020 THBS3P49746 956 aa11.6□□□□□ -0.55
USF1-202ENST00000368020 PDLIM3Q53GG5 364 aaPredicted RBP11.6□□□□□ -0.55
USF1-202ENST00000368020 ZNF506Q5JVG8 444 aa11.6□□□□□ -0.55
USF1-202ENST00000368020 FAM122CQ6P4D5 195 aa11.6□□□□□ -0.55
USF1-202ENST00000368020 TMEM88Q6PEY1 159 aa11.6□□□□□ -0.55
USF1-202ENST00000368020 OR10G4Q8NGN3 311 aa11.6□□□□□ -0.55
USF1-202ENST00000368020 MBD3L1Q8WWY6 194 aa11.6□□□□□ -0.55
USF1-202ENST00000368020 TAF15Q92804 592 aaKnown RBP eCLIP11.6□□□□□ -0.55
USF1-202ENST00000368020 GAFA1Q96PS6 74 aa11.6□□□□□ -0.55
USF1-202ENST00000368020 DCTN5Q9BTE1 182 aa11.6□□□□□ -0.55
USF1-202ENST00000368020 IFI27L2Q9H2X8 130 aa11.6□□□□□ -0.55
USF1-202ENST00000368020 ESRP2Q9H6T0 727 aaKnown RBP11.6□□□□□ -0.55
USF1-202ENST00000368020 TUBA4BQ9H853 241 aa11.6□□□□□ -0.55
USF1-202ENST00000368020 hADV38S2A0JD32 116 aa11.6□□□□□ -0.55
USF1-202ENST00000368020 GPR37O15354 613 aa11.6□□□□□ -0.55
USF1-202ENST00000368020 PRB1P04280 392 aa11.6□□□□□ -0.55
USF1-202ENST00000368020 OR4A8P0C604 315 aa11.6□□□□□ -0.55
USF1-202ENST00000368020 TAGLN2P37802 199 aaKnown RBP11.6□□□□□ -0.55
USF1-202ENST00000368020 SPCS3P61009 180 aa11.6□□□□□ -0.55
USF1-202ENST00000368020 GNB2P62879 340 aa11.6□□□□□ -0.55
USF1-202ENST00000368020 MEF2CQ06413 473 aaPredicted RBP11.6□□□□□ -0.55
USF1-202ENST00000368020 BSPH1Q075Z2 132 aa11.6□□□□□ -0.55
USF1-202ENST00000368020 PMS2P11Q13670 270 aa11.6□□□□□ -0.55
USF1-202ENST00000368020 ADIPOQQ15848 244 aa11.6□□□□□ -0.55
USF1-202ENST00000368020 C17orf58Q2M2W7 97 aa11.6□□□□□ -0.55
USF1-202ENST00000368020 C15orf54Q8N8G6 183 aa11.6□□□□□ -0.55
USF1-202ENST00000368020 OR4C12Q96R67 309 aa11.6□□□□□ -0.55
USF1-202ENST00000368020 RAI1Q7Z5J4 1906 aaPredicted RBP11.59□□□□□ -0.55
USF1-202ENST00000368020 PLCE1Q9P212 2302 aa11.59□□□□□ -0.55
USF1-202ENST00000368020 MYO18BQ8IUG5 2567 aa11.59□□□□□ -0.55
USF1-202ENST00000368020 FCGR3BO75015 233 aa11.59□□□□□ -0.55
USF1-202ENST00000368020 F12P00748 615 aaPredicted RBP11.59□□□□□ -0.55
USF1-202ENST00000368020 IFNA1P01562 189 aa11.59□□□□□ -0.55
USF1-202ENST00000368020 GNLYP22749 145 aa11.59□□□□□ -0.55
USF1-202ENST00000368020 ARL16Q0P5N6 197 aa11.59□□□□□ -0.55
USF1-202ENST00000368020 LTC4SQ16873 150 aa11.59□□□□□ -0.55
USF1-202ENST00000368020 HFEQ30201 348 aa11.59□□□□□ -0.55
USF1-202ENST00000368020 SPRNQ5BIV9 151 aa11.59□□□□□ -0.55
USF1-202ENST00000368020 PRAMEF5Q5TYX0 476 aa11.59□□□□□ -0.55
USF1-202ENST00000368020 NCR3LG1Q68D85 454 aa11.59□□□□□ -0.55
USF1-202ENST00000368020 HAPLN4Q86UW8 402 aa11.59□□□□□ -0.55
USF1-202ENST00000368020 CBLN2Q8IUK8 224 aa11.59□□□□□ -0.55
USF1-202ENST00000368020 OR4A16Q8NH70 328 aa11.59□□□□□ -0.55
USF1-202ENST00000368020 ZNF251Q9BRH9 671 aa11.59□□□□□ -0.55
USF1-202ENST00000368020 AIFM2Q9BRQ8 373 aa11.59□□□□□ -0.55
USF1-202ENST00000368020 GAL3ST2Q9H3Q3 398 aa11.59□□□□□ -0.55
USF1-202ENST00000368020 IDI2-AS1Q9NZ38 188 aa11.59□□□□□ -0.55
USF1-202ENST00000368020 LINC00312Q9Y6C7 94 aa11.59□□□□□ -0.55
USF1-202ENST00000368020 HCFC1P51610 2035 aa11.59□□□□□ -0.55
USF1-202ENST00000368020 UBE2L5PA0A1B0GUS4 154 aa11.58□□□□□ -0.56
USF1-202ENST00000368020 DPRXA6NFQ7 191 aa11.58□□□□□ -0.56
USF1-202ENST00000368020 C17orf112F2Z3M2 114 aa11.58□□□□□ -0.56
USF1-202ENST00000368020 ZG16O60844 167 aa11.58□□□□□ -0.56
USF1-202ENST00000368020 NDUFS6O75380 124 aaKnown RBP11.58□□□□□ -0.56
USF1-202ENST00000368020 ADORA2A-AS1P86434 159 aa11.58□□□□□ -0.56
USF1-202ENST00000368020 VWC2Q2TAL6 325 aa11.58□□□□□ -0.56
USF1-202ENST00000368020 FBXL19-AS1Q494R0 122 aa11.58□□□□□ -0.56
USF1-202ENST00000368020 OR8G2PQ6IF36 304 aa11.58□□□□□ -0.56
USF1-202ENST00000368020 ZNF429Q86V71 674 aa11.58□□□□□ -0.56
USF1-202ENST00000368020 CLDND2Q8NHS1 167 aa11.58□□□□□ -0.56
USF1-202ENST00000368020 RSG1Q9BU20 258 aa11.58□□□□□ -0.56
USF1-202ENST00000368020 MLXQ9UH92 298 aa11.58□□□□□ -0.56
USF1-202ENST00000368020 M0R036 132 aa11.57□□□□□ -0.56
USF1-202ENST00000368020 CYB5R3P00387 301 aaPredicted RBP11.57□□□□□ -0.56
USF1-202ENST00000368020 IFNA17P01571 189 aa11.57□□□□□ -0.56
USF1-202ENST00000368020 AGAP20933 346 aa11.57□□□□□ -0.56
USF1-202ENST00000368020 UQCRFS1P47985 274 aa11.57□□□□□ -0.56
USF1-202ENST00000368020 AWAT1Q58HT5 328 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms