RNA–Protein interactions for RNA: ENST00000360668.7

MAP1LC3A-201, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3A, Length 1,574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-201ENST00000360668 K7EPK0 472 aa17.11■□□□□ 0.33
MAP1LC3A-201ENST00000360668 FCGR3BO75015 233 aa17.11■□□□□ 0.33
MAP1LC3A-201ENST00000360668 SCGB1D2O95969 90 aa17.11■□□□□ 0.33
MAP1LC3A-201ENST00000360668 HPRT1P00492 218 aa17.11■□□□□ 0.33
MAP1LC3A-201ENST00000360668 ZNF137PP52743 207 aa17.11■□□□□ 0.33
MAP1LC3A-201ENST00000360668 GPR157Q5UAW9 335 aa17.11■□□□□ 0.33
MAP1LC3A-201ENST00000360668 FAM71E2Q8N5Q1 922 aa17.11■□□□□ 0.33
MAP1LC3A-201ENST00000360668 KIR3DL3Q8N743 410 aa17.11■□□□□ 0.33
MAP1LC3A-201ENST00000360668 ST8SIA2Q92186 375 aa17.11■□□□□ 0.33
MAP1LC3A-201ENST00000360668 TMEM186Q96B77 213 aa17.11■□□□□ 0.33
MAP1LC3A-201ENST00000360668 MMP24Q9Y5R2 645 aa17.11■□□□□ 0.33
MAP1LC3A-201ENST00000360668 POMT1Q9Y6A1 747 aa17.11■□□□□ 0.33
MAP1LC3A-201ENST00000360668 APCP25054 2843 aa17.11■□□□□ 0.33
MAP1LC3A-201ENST00000360668 IGHV2-26A0A0B4J1V2 119 aa17.11■□□□□ 0.33
MAP1LC3A-201ENST00000360668 VWC2LB2RUY7 222 aa17.11■□□□□ 0.33
MAP1LC3A-201ENST00000360668 TOR1AO14656 332 aa17.11■□□□□ 0.33
MAP1LC3A-201ENST00000360668 ENSAO43768 121 aaKnown RBP17.11■□□□□ 0.33
MAP1LC3A-201ENST00000360668 PITX3O75364 302 aa17.11■□□□□ 0.33
MAP1LC3A-201ENST00000360668 ZFP36P26651 326 aaKnown RBP17.11■□□□□ 0.33
MAP1LC3A-201ENST00000360668 PRRX1P54821 245 aa17.11■□□□□ 0.33
MAP1LC3A-201ENST00000360668 C1orf122Q6ZSJ8 110 aa17.11■□□□□ 0.33
MAP1LC3A-201ENST00000360668 Q8N7P7 452 aa17.11■□□□□ 0.33
MAP1LC3A-201ENST00000360668 NRGNQ92686 78 aa17.11■□□□□ 0.33
MAP1LC3A-201ENST00000360668 CLEC7AQ9BXN2 247 aa17.11■□□□□ 0.33
MAP1LC3A-201ENST00000360668 P0C879 139 aa17.1■□□□□ 0.33
MAP1LC3A-201ENST00000360668 HKR1P10072 659 aa17.1■□□□□ 0.33
MAP1LC3A-201ENST00000360668 MMP9P14780 707 aa17.1■□□□□ 0.33
MAP1LC3A-201ENST00000360668 IL3RAP26951 378 aa17.1■□□□□ 0.33
MAP1LC3A-201ENST00000360668 NKX2-1P43699 371 aaPredicted RBP17.1■□□□□ 0.33
MAP1LC3A-201ENST00000360668 DSCR9P59020 149 aa17.1■□□□□ 0.33
MAP1LC3A-201ENST00000360668 ZNF383Q8NA42 475 aa17.1■□□□□ 0.33
MAP1LC3A-201ENST00000360668 BEND2Q8NDZ0 799 aa17.1■□□□□ 0.33
MAP1LC3A-201ENST00000360668 OR4S2Q8NH73 311 aa17.1■□□□□ 0.33
MAP1LC3A-201ENST00000360668 STOML3Q8TAV4 291 aa17.1■□□□□ 0.33
MAP1LC3A-201ENST00000360668 LSM5Q9Y4Y9 91 aaKnown RBP17.1■□□□□ 0.33
MAP1LC3A-201ENST00000360668 TACC2O95359 2948 aa17.09■□□□□ 0.33
MAP1LC3A-201ENST00000360668 RPS10-NUDT3A0A1W2PQS6 291 aa17.09■□□□□ 0.33
MAP1LC3A-201ENST00000360668 CT45A6P0DMU7 189 aa17.09■□□□□ 0.33
MAP1LC3A-201ENST00000360668 CT45A5P0DMU8 189 aa17.09■□□□□ 0.33
MAP1LC3A-201ENST00000360668 CT45A7P0DMV0 189 aa17.09■□□□□ 0.33
MAP1LC3A-201ENST00000360668 EPHA1P21709 976 aa17.09■□□□□ 0.33
MAP1LC3A-201ENST00000360668 RPL12P30050 165 aaKnown RBP17.09■□□□□ 0.33
MAP1LC3A-201ENST00000360668 P2RY1P47900 373 aa17.09■□□□□ 0.33
MAP1LC3A-201ENST00000360668 ARF6P62330 175 aa17.09■□□□□ 0.33
MAP1LC3A-201ENST00000360668 EIF5AP63241 154 aaKnown RBP17.09■□□□□ 0.33
MAP1LC3A-201ENST00000360668 ID3Q02535 119 aa17.09■□□□□ 0.33
MAP1LC3A-201ENST00000360668 FOXRED2Q8IWF2 684 aa17.09■□□□□ 0.33
MAP1LC3A-201ENST00000360668 ST6GALNAC6Q969X2 333 aa17.09■□□□□ 0.33
MAP1LC3A-201ENST00000360668 PERPQ96FX8 193 aa17.09■□□□□ 0.33
MAP1LC3A-201ENST00000360668 ZNF471Q9BX82 626 aaPredicted RBP17.09■□□□□ 0.33
MAP1LC3A-201ENST00000360668 COA4Q9NYJ1 87 aa17.09■□□□□ 0.33
MAP1LC3A-201ENST00000360668 KRASP01116 189 aa17.08■□□□□ 0.32
MAP1LC3A-201ENST00000360668 IGLV1-47P01700 117 aa17.08■□□□□ 0.32
MAP1LC3A-201ENST00000360668 G6PCP35575 357 aa17.08■□□□□ 0.32
MAP1LC3A-201ENST00000360668 TAGLNQ01995 201 aaKnown RBP17.08■□□□□ 0.32
MAP1LC3A-201ENST00000360668 PAX2Q02962 417 aa17.08■□□□□ 0.32
MAP1LC3A-201ENST00000360668 Q6ZRM9 215 aa17.08■□□□□ 0.32
MAP1LC3A-201ENST00000360668 OR13D1Q8NGV5 346 aa17.08■□□□□ 0.32
MAP1LC3A-201ENST00000360668 CACNG5Q9UF02 275 aa17.08■□□□□ 0.32
MAP1LC3A-201ENST00000360668 AUP1Q9Y679 476 aa17.08■□□□□ 0.32
MAP1LC3A-201ENST00000360668 ABCA12Q86UK0 2595 aa17.08■□□□□ 0.32
MAP1LC3A-201ENST00000360668 ARID1AO14497 2285 aa17.08■□□□□ 0.32
MAP1LC3A-201ENST00000360668 FOXH1O75593 365 aa17.07■□□□□ 0.32
MAP1LC3A-201ENST00000360668 PRTN3P24158 256 aa17.07■□□□□ 0.32
MAP1LC3A-201ENST00000360668 HLA-DRB5Q30154 266 aa17.07■□□□□ 0.32
MAP1LC3A-201ENST00000360668 R3HDM4Q96D70 268 aa17.07■□□□□ 0.32
MAP1LC3A-201ENST00000360668 SLC25A32Q9H2D1 315 aa17.07■□□□□ 0.32
MAP1LC3A-201ENST00000360668 CYTL1Q9NRR1 136 aa17.07■□□□□ 0.32
MAP1LC3A-201ENST00000360668 KPTNQ9Y664 436 aa17.07■□□□□ 0.32
MAP1LC3A-201ENST00000360668 IGHV2-70DA0A0C4DH43 119 aa17.06■□□□□ 0.32
MAP1LC3A-201ENST00000360668 MSGN1A6NI15 193 aa17.06■□□□□ 0.32
MAP1LC3A-201ENST00000360668 MARCH11A6NNE9 402 aa17.06■□□□□ 0.32
MAP1LC3A-201ENST00000360668 TPT1P13693 172 aaKnown RBP17.06■□□□□ 0.32
MAP1LC3A-201ENST00000360668 PVALBP20472 110 aaPredicted RBP17.06■□□□□ 0.32
MAP1LC3A-201ENST00000360668 LCN2P80188 198 aa17.06■□□□□ 0.32
MAP1LC3A-201ENST00000360668 CXorf66Q5JRM2 361 aaPredicted RBP17.06■□□□□ 0.32
MAP1LC3A-201ENST00000360668 DHRS7BQ6IAN0 325 aaPredicted RBP17.06■□□□□ 0.32
MAP1LC3A-201ENST00000360668 MRPL20Q9BYC9 149 aaKnown RBP17.06■□□□□ 0.32
MAP1LC3A-201ENST00000360668 MED9Q9NWA0 146 aa17.06■□□□□ 0.32
MAP1LC3A-201ENST00000360668 RCL1Q9Y2P8 373 aaKnown RBP17.06■□□□□ 0.32
MAP1LC3A-201ENST00000360668 POLR3KQ9Y2Y1 108 aaPredicted RBP17.06■□□□□ 0.32
MAP1LC3A-201ENST00000360668 AMMECR1Q9Y4X0 333 aaPredicted RBP17.06■□□□□ 0.32
MAP1LC3A-201ENST00000360668 GPR137BO60478 399 aa17.06■□□□□ 0.32
MAP1LC3A-201ENST00000360668 SPDEFO95238 335 aa17.06■□□□□ 0.32
MAP1LC3A-201ENST00000360668 RRASP10301 218 aa17.06■□□□□ 0.32
MAP1LC3A-201ENST00000360668 NQO2P16083 231 aa17.06■□□□□ 0.32
MAP1LC3A-201ENST00000360668 ARHGDIBP52566 201 aa17.06■□□□□ 0.32
MAP1LC3A-201ENST00000360668 RTL8BQ17RB0 113 aa17.06■□□□□ 0.32
MAP1LC3A-201ENST00000360668 IZUMO4Q1ZYL8 232 aa17.06■□□□□ 0.32
MAP1LC3A-201ENST00000360668 H2BFWTQ7Z2G1 175 aa17.06■□□□□ 0.32
MAP1LC3A-201ENST00000360668 PCGF1Q9BSM1 259 aa17.06■□□□□ 0.32
MAP1LC3A-201ENST00000360668 C11orf1Q9H5F2 150 aa17.06■□□□□ 0.32
MAP1LC3A-201ENST00000360668 UNKLQ9H9P5 680 aaKnown RBP17.06■□□□□ 0.32
MAP1LC3A-201ENST00000360668 SLC35D1Q9NTN3 355 aa17.06■□□□□ 0.32
MAP1LC3A-201ENST00000360668 SPG11Q96JI7 2443 aa17.05■□□□□ 0.32
MAP1LC3A-201ENST00000360668 FAM90A9PA6NNJ1 464 aa17.05■□□□□ 0.32
MAP1LC3A-201ENST00000360668 COX7A1P24310 79 aa17.05■□□□□ 0.32
MAP1LC3A-201ENST00000360668 DLX1P56177 255 aa17.05■□□□□ 0.32
MAP1LC3A-201ENST00000360668 ERVK-16P61578 105 aa17.05■□□□□ 0.32
MAP1LC3A-201ENST00000360668 ALKAL2Q6UX46 152 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms