RNA–Protein interactions for RNA: ENST00000360046.9

HOXA4-201, Transcript of homeobox A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA4, Length 1,747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA4-201ENST00000360046 TXNL1O43396 289 aa17.7■□□□□ 0.42
HOXA4-201ENST00000360046 IFNA21P01568 189 aa17.7■□□□□ 0.42
HOXA4-201ENST00000360046 RPA2P15927 270 aa17.7■□□□□ 0.42
HOXA4-201ENST00000360046 H2BFSP57053 126 aa17.7■□□□□ 0.42
HOXA4-201ENST00000360046 RTL8BQ17RB0 113 aa17.7■□□□□ 0.42
HOXA4-201ENST00000360046 OR4S2Q8NH73 311 aa17.7■□□□□ 0.42
HOXA4-201ENST00000360046 RNASE11Q8TAA1 199 aaKnown RBP17.7■□□□□ 0.42
HOXA4-201ENST00000360046 ZNF436Q9C0F3 470 aaPredicted RBP17.7■□□□□ 0.42
HOXA4-201ENST00000360046 SLC35D1Q9NTN3 355 aa17.7■□□□□ 0.42
HOXA4-201ENST00000360046 IGHV1-3A0A0C4DH29 117 aa17.69■□□□□ 0.42
HOXA4-201ENST00000360046 NPFFO15130 113 aa17.69■□□□□ 0.42
HOXA4-201ENST00000360046 CRYZL1O95825 349 aa17.69■□□□□ 0.42
HOXA4-201ENST00000360046 IGKV1-39P01597 117 aa17.69■□□□□ 0.42
HOXA4-201ENST00000360046 IGKV1D-39P04432 117 aa17.69■□□□□ 0.42
HOXA4-201ENST00000360046 EPHA1P21709 976 aa17.69■□□□□ 0.42
HOXA4-201ENST00000360046 MINOS1Q5TGZ0 78 aa17.69■□□□□ 0.42
HOXA4-201ENST00000360046 GPR157Q5UAW9 335 aa17.69■□□□□ 0.42
HOXA4-201ENST00000360046 GGNBP1Q5YKI7 109 aa17.69■□□□□ 0.42
HOXA4-201ENST00000360046 MOB3BQ86TA1 216 aa17.69■□□□□ 0.42
HOXA4-201ENST00000360046 PDCD10Q9BUL8 212 aa17.69■□□□□ 0.42
HOXA4-201ENST00000360046 RANGRFQ9HD47 186 aaPredicted RBP17.69■□□□□ 0.42
HOXA4-201ENST00000360046 TBL2Q9Y4P3 447 aaKnown RBP17.69■□□□□ 0.42
HOXA4-201ENST00000360046 MINOS1-NBL1R4GNA1 71 aa17.69■□□□□ 0.42
HOXA4-201ENST00000360046 PIGBOS1A0A0B4J2F0 54 aa17.69■□□□□ 0.42
HOXA4-201ENST00000360046 H0YJW9 148 aa17.69■□□□□ 0.42
HOXA4-201ENST00000360046 RBFOX2O43251 390 aaKnown RBP eCLIP17.69■□□□□ 0.42
HOXA4-201ENST00000360046 SAA4P35542 130 aa17.69■□□□□ 0.42
HOXA4-201ENST00000360046 AKR1C2P52895 323 aa17.69■□□□□ 0.42
HOXA4-201ENST00000360046 CD300CQ08708 224 aa17.69■□□□□ 0.42
HOXA4-201ENST00000360046 SSX2Q16385 188 aa17.69■□□□□ 0.42
HOXA4-201ENST00000360046 GSG1LQ6UXU4 331 aa17.69■□□□□ 0.42
HOXA4-201ENST00000360046 OR5AN1Q8NGI8 311 aa17.69■□□□□ 0.42
HOXA4-201ENST00000360046 RBMXL1Q96E39 390 aaKnown RBP17.69■□□□□ 0.42
HOXA4-201ENST00000360046 OTOGQ6ZRI0 2925 aa17.68■□□□□ 0.42
HOXA4-201ENST00000360046 IGHV1-69DA0A0B4J2H0 117 aa17.68■□□□□ 0.42
HOXA4-201ENST00000360046 DUXBA0A1W2PPF3 345 aa17.68■□□□□ 0.42
HOXA4-201ENST00000360046 MPTX1A8MV57 137 aa17.68■□□□□ 0.42
HOXA4-201ENST00000360046 HPRT1P00492 218 aa17.68■□□□□ 0.42
HOXA4-201ENST00000360046 AVPP01185 164 aa17.68■□□□□ 0.42
HOXA4-201ENST00000360046 IGHV1-69P01742 117 aa17.68■□□□□ 0.42
HOXA4-201ENST00000360046 HLA-GP17693 338 aa17.68■□□□□ 0.42
HOXA4-201ENST00000360046 TAGLNQ01995 201 aaKnown RBP17.68■□□□□ 0.42
HOXA4-201ENST00000360046 MIDNQ504T8 468 aa17.68■□□□□ 0.42
HOXA4-201ENST00000360046 RUSC1-AS1Q66K80 236 aa17.68■□□□□ 0.42
HOXA4-201ENST00000360046 TMED3Q9Y3Q3 217 aa17.68■□□□□ 0.42
HOXA4-201ENST00000360046 IGHV3-72A0A0B4J1Y9 119 aa17.67■□□□□ 0.42
HOXA4-201ENST00000360046 KRASP01116 189 aa17.67■□□□□ 0.42
HOXA4-201ENST00000360046 IGHV4-38-2P0DP08 117 aa17.67■□□□□ 0.42
HOXA4-201ENST00000360046 PAX6P26367 422 aa17.67■□□□□ 0.42
HOXA4-201ENST00000360046 C17orf50Q8WW18 174 aa17.67■□□□□ 0.42
HOXA4-201ENST00000360046 SEC22AQ96IW7 307 aa17.67■□□□□ 0.42
HOXA4-201ENST00000360046 ST6GAL2Q96JF0 529 aa17.67■□□□□ 0.42
HOXA4-201ENST00000360046 FYTTD1Q96QD9 318 aaKnown RBP17.67■□□□□ 0.42
HOXA4-201ENST00000360046 PLEKHA2Q9HB19 425 aa17.67■□□□□ 0.42
HOXA4-201ENST00000360046 A0A1W2PPI3 338 aa17.67■□□□□ 0.42
HOXA4-201ENST00000360046 ATG12O94817 140 aa17.67■□□□□ 0.42
HOXA4-201ENST00000360046 IGKV1-16P04430 117 aa17.67■□□□□ 0.42
HOXA4-201ENST00000360046 RRASP10301 218 aa17.67■□□□□ 0.42
HOXA4-201ENST00000360046 VDAC1P21796 283 aa17.67■□□□□ 0.42
HOXA4-201ENST00000360046 G6PCP35575 357 aa17.67■□□□□ 0.42
HOXA4-201ENST00000360046 RAB13P51153 203 aa17.67■□□□□ 0.42
HOXA4-201ENST00000360046 DHRS7BQ6IAN0 325 aaPredicted RBP17.67■□□□□ 0.42
HOXA4-201ENST00000360046 BRD3OSQ6XYD6 125 aa17.67■□□□□ 0.42
HOXA4-201ENST00000360046 PIP4P2Q8N4L2 257 aa17.67■□□□□ 0.42
HOXA4-201ENST00000360046 RRNAD1Q96FB5 475 aaKnown RBP17.67■□□□□ 0.42
HOXA4-201ENST00000360046 OR10C1Q96KK4 312 aa17.67■□□□□ 0.42
HOXA4-201ENST00000360046 WASHC3Q9Y3C0 194 aa17.67■□□□□ 0.42
HOXA4-201ENST00000360046 TLN2Q9Y4G6 2542 aa17.66■□□□□ 0.42
HOXA4-201ENST00000360046 IGKV1-5P01602 117 aa17.66■□□□□ 0.42
HOXA4-201ENST00000360046 MC5RP33032 325 aa17.66■□□□□ 0.42
HOXA4-201ENST00000360046 CCDC144NLQ6NUI1 221 aa17.66■□□□□ 0.42
HOXA4-201ENST00000360046 PDPNQ86YL7 162 aa17.66■□□□□ 0.42
HOXA4-201ENST00000360046 OR8H3Q8N146 312 aa17.66■□□□□ 0.42
HOXA4-201ENST00000360046 R3HDM4Q96D70 268 aa17.66■□□□□ 0.42
HOXA4-201ENST00000360046 CSPG4Q6UVK1 2322 aa17.65■□□□□ 0.42
HOXA4-201ENST00000360046 MARCH11A6NNE9 402 aa17.65■□□□□ 0.42
HOXA4-201ENST00000360046 TIMM23O14925 209 aa17.65■□□□□ 0.42
HOXA4-201ENST00000360046 GIPP09681 153 aaPredicted RBP17.65■□□□□ 0.42
HOXA4-201ENST00000360046 IAH1Q2TAA2 248 aaPredicted RBP17.65■□□□□ 0.42
HOXA4-201ENST00000360046 DYNAPQ8N1N2 210 aa17.65■□□□□ 0.42
HOXA4-201ENST00000360046 MALSU1Q96EH3 234 aa17.65■□□□□ 0.42
HOXA4-201ENST00000360046 WDR89Q96FK6 387 aaPredicted RBP17.65■□□□□ 0.42
HOXA4-201ENST00000360046 COMMD9Q9P000 198 aa17.65■□□□□ 0.42
HOXA4-201ENST00000360046 OOSP1A8MZH6 123 aa17.64■□□□□ 0.41
HOXA4-201ENST00000360046 ERVK-16P61578 105 aa17.64■□□□□ 0.41
HOXA4-201ENST00000360046 NMSQ5H8A3 153 aa17.64■□□□□ 0.41
HOXA4-201ENST00000360046 SSX9Q7RTT3 188 aa17.64■□□□□ 0.41
HOXA4-201ENST00000360046 DMBX1Q8NFW5 382 aa17.64■□□□□ 0.41
HOXA4-201ENST00000360046 FLYWCH2Q96CP2 140 aaKnown RBP17.64■□□□□ 0.41
HOXA4-201ENST00000360046 GSKIPQ9P0R6 139 aa17.64■□□□□ 0.41
HOXA4-201ENST00000360046 ACANP16112 2415 aa17.64■□□□□ 0.41
HOXA4-201ENST00000360046 A0A0G2JRQ6 117 aa17.64■□□□□ 0.41
HOXA4-201ENST00000360046 OR2A4O95047 310 aa17.64■□□□□ 0.41
HOXA4-201ENST00000360046 NQO2P16083 231 aa17.64■□□□□ 0.41
HOXA4-201ENST00000360046 IZUMO4Q1ZYL8 232 aa17.64■□□□□ 0.41
HOXA4-201ENST00000360046 KLF17Q5JT82 389 aaPredicted RBP17.64■□□□□ 0.41
HOXA4-201ENST00000360046 THOC7Q6I9Y2 204 aaKnown RBP17.64■□□□□ 0.41
HOXA4-201ENST00000360046 VKORC1L1Q8N0U8 176 aa17.64■□□□□ 0.41
HOXA4-201ENST00000360046 LSM10Q969L4 123 aaKnown RBP17.64■□□□□ 0.41
HOXA4-201ENST00000360046 C2orf50Q96LR7 162 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms