RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 FAM90A26D6RGX4 464 aa5.26□□□□□ -1.57
VPS13B-203ENST00000358544 TNFSF11O14788 317 aa5.26□□□□□ -1.57
VPS13B-203ENST00000358544 KCNE4Q8WWG9 221 aa5.26□□□□□ -1.57
VPS13B-203ENST00000358544 TMEM242Q9NWH2 141 aa5.26□□□□□ -1.57
VPS13B-203ENST00000358544 PLXNB2O15031 1838 aa5.26□□□□□ -1.57
VPS13B-203ENST00000358544 RPL36A-HNRNPH2H7BZ11 118 aa5.26□□□□□ -1.57
VPS13B-203ENST00000358544 IGHV3-9P01782 118 aa5.26□□□□□ -1.57
VPS13B-203ENST00000358544 PRSS27Q9BQR3 290 aa5.26□□□□□ -1.57
VPS13B-203ENST00000358544 SOX21Q9Y651 276 aaPredicted RBP5.26□□□□□ -1.57
VPS13B-203ENST00000358544 PSG1P11464 419 aa5.25□□□□□ -1.57
VPS13B-203ENST00000358544 WDR54Q9H977 334 aa5.25□□□□□ -1.57
VPS13B-203ENST00000358544 CD40P25942 277 aa5.25□□□□□ -1.57
VPS13B-203ENST00000358544 LINC00596Q86U02 117 aa5.25□□□□□ -1.57
VPS13B-203ENST00000358544 GPBAR1Q8TDU6 330 aa5.25□□□□□ -1.57
VPS13B-203ENST00000358544 MRPL16Q9NX20 251 aaKnown RBP5.25□□□□□ -1.57
VPS13B-203ENST00000358544 POLR3KQ9Y2Y1 108 aaPredicted RBP5.25□□□□□ -1.57
VPS13B-203ENST00000358544 LRRC30A6NM36 301 aa5.25□□□□□ -1.57
VPS13B-203ENST00000358544 C17orf51A8MQB3 221 aa5.25□□□□□ -1.57
VPS13B-203ENST00000358544 ITGBL1O95965 494 aaPredicted RBP5.25□□□□□ -1.57
VPS13B-203ENST00000358544 RBM11P57052 281 aaKnown RBP5.25□□□□□ -1.57
VPS13B-203ENST00000358544 YPEL5P62699 121 aa5.25□□□□□ -1.57
VPS13B-203ENST00000358544 NOGQ13253 232 aa5.25□□□□□ -1.57
VPS13B-203ENST00000358544 CLEC2AQ6UVW9 174 aa5.25□□□□□ -1.57
VPS13B-203ENST00000358544 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.25□□□□□ -1.57
VPS13B-203ENST00000358544 SPSB4Q96A44 273 aa5.25□□□□□ -1.57
VPS13B-203ENST00000358544 IMMP2LQ96T52 175 aa5.25□□□□□ -1.57
VPS13B-203ENST00000358544 SFXN3Q9BWM7 321 aa5.25□□□□□ -1.57
VPS13B-203ENST00000358544 TCFL5Q9UL49 500 aa5.25□□□□□ -1.57
VPS13B-203ENST00000358544 IGHV3-43A0A0B4J1X8 118 aa5.25□□□□□ -1.57
VPS13B-203ENST00000358544 TSPAN13O95857 204 aa5.25□□□□□ -1.57
VPS13B-203ENST00000358544 IGHV3-43DP0DP04 118 aa5.25□□□□□ -1.57
VPS13B-203ENST00000358544 GZMBP10144 247 aa5.25□□□□□ -1.57
VPS13B-203ENST00000358544 ZFAND6Q6FIF0 208 aa5.25□□□□□ -1.57
VPS13B-203ENST00000358544 FAM19A2Q8N3H0 131 aa5.25□□□□□ -1.57
VPS13B-203ENST00000358544 FAM131CQ96AQ9 280 aa5.25□□□□□ -1.57
VPS13B-203ENST00000358544 PXMP4Q9Y6I8 212 aa5.25□□□□□ -1.57
VPS13B-203ENST00000358544 GNG3P63215 75 aa5.25□□□□□ -1.57
VPS13B-203ENST00000358544 HBBP68871 147 aa5.25□□□□□ -1.57
VPS13B-203ENST00000358544 ACSF3Q4G176 576 aaPredicted RBP5.25□□□□□ -1.57
VPS13B-203ENST00000358544 SCCPDHQ8NBX0 429 aa5.25□□□□□ -1.57
VPS13B-203ENST00000358544 ZNF418Q8TF45 676 aaPredicted RBP5.25□□□□□ -1.57
VPS13B-203ENST00000358544 NAT6Q93015 286 aa5.25□□□□□ -1.57
VPS13B-203ENST00000358544 STRCQ7RTU9 1775 aa5.25□□□□□ -1.57
VPS13B-203ENST00000358544 H0YIG0 161 aa5.25□□□□□ -1.57
VPS13B-203ENST00000358544 PRICKLE4Q2TBC4 344 aa5.25□□□□□ -1.57
VPS13B-203ENST00000358544 IBA57Q5T440 356 aaKnown RBP5.25□□□□□ -1.57
VPS13B-203ENST00000358544 RFESDQ8TAC1 157 aa5.25□□□□□ -1.57
VPS13B-203ENST00000358544 Q96M66 194 aa5.25□□□□□ -1.57
VPS13B-203ENST00000358544 SPANXDQ9BXN6 97 aa5.25□□□□□ -1.57
VPS13B-203ENST00000358544 TSC2P49815 1807 aa5.25□□□□□ -1.57
VPS13B-203ENST00000358544 IZUMO1RA6ND01 250 aa5.25□□□□□ -1.57
VPS13B-203ENST00000358544 MPDU1O75352 247 aa5.25□□□□□ -1.57
VPS13B-203ENST00000358544 ZXDCQ2QGD7 858 aaPredicted RBP5.25□□□□□ -1.57
VPS13B-203ENST00000358544 OR2K2Q8NGT1 345 aa5.25□□□□□ -1.57
VPS13B-203ENST00000358544 OR10D3Q8NH80 312 aa5.25□□□□□ -1.57
VPS13B-203ENST00000358544 SCRG1O75711 98 aa5.25□□□□□ -1.57
VPS13B-203ENST00000358544 ZNF735P0CB33 412 aa5.25□□□□□ -1.57
VPS13B-203ENST00000358544 ACTL10Q5JWF8 245 aa5.25□□□□□ -1.57
VPS13B-203ENST00000358544 RSPO2Q6UXX9 243 aaPredicted RBP5.25□□□□□ -1.57
VPS13B-203ENST00000358544 GPR146Q96CH1 333 aa5.25□□□□□ -1.57
VPS13B-203ENST00000358544 MRGPRX1Q96LB2 322 aa5.25□□□□□ -1.57
VPS13B-203ENST00000358544 GTSF1LQ9H1H1 148 aa5.25□□□□□ -1.57
VPS13B-203ENST00000358544 DYNLRB1Q9NP97 96 aa5.25□□□□□ -1.57
VPS13B-203ENST00000358544 MRPS16Q9Y3D3 137 aaKnown RBP5.25□□□□□ -1.57
VPS13B-203ENST00000358544 HS3ST3B1Q9Y662 390 aa5.25□□□□□ -1.57
VPS13B-203ENST00000358544 CT62P0C5K7 136 aa5.25□□□□□ -1.57
VPS13B-203ENST00000358544 SLC35E4Q6ICL7 350 aa5.25□□□□□ -1.57
VPS13B-203ENST00000358544 RNF126Q9BV68 326 aa5.25□□□□□ -1.57
VPS13B-203ENST00000358544 IL36BQ9NZH7 164 aa5.25□□□□□ -1.57
VPS13B-203ENST00000358544 LOC389332A0A1B0GUA5 103 aa5.25□□□□□ -1.57
VPS13B-203ENST00000358544 MEOX1P50221 254 aa5.25□□□□□ -1.57
VPS13B-203ENST00000358544 C1orf174Q8IYL3 243 aa5.25□□□□□ -1.57
VPS13B-203ENST00000358544 SARGQ9BW04 601 aa5.25□□□□□ -1.57
VPS13B-203ENST00000358544 ALS2Q96Q42 1657 aa5.25□□□□□ -1.57
VPS13B-203ENST00000358544 SMIM17P0DL12 118 aa5.25□□□□□ -1.57
VPS13B-203ENST00000358544 CD1BP29016 333 aa5.25□□□□□ -1.57
VPS13B-203ENST00000358544 OPRK1P41145 380 aa5.25□□□□□ -1.57
VPS13B-203ENST00000358544 CCL4L1Q8NHW4 92 aa5.25□□□□□ -1.57
VPS13B-203ENST00000358544 PERPQ96FX8 193 aa5.25□□□□□ -1.57
VPS13B-203ENST00000358544 COX11Q9Y6N1 276 aa5.25□□□□□ -1.57
VPS13B-203ENST00000358544 ZNF502Q8TBZ5 544 aa5.24□□□□□ -1.57
VPS13B-203ENST00000358544 AMELYQ99218 206 aa5.24□□□□□ -1.57
VPS13B-203ENST00000358544 BTAF1O14981 1849 aa5.24□□□□□ -1.57
VPS13B-203ENST00000358544 IGHV3-15A0A0B4J1V0 119 aa5.24□□□□□ -1.57
VPS13B-203ENST00000358544 LOC101059948A0A1B0GTJ6 334 aa5.24□□□□□ -1.57
VPS13B-203ENST00000358544 TMEM189A5PLL7 270 aa5.24□□□□□ -1.57
VPS13B-203ENST00000358544 CLDN14O95500 239 aa5.24□□□□□ -1.57
VPS13B-203ENST00000358544 ANKRD37Q7Z713 158 aa5.24□□□□□ -1.57
VPS13B-203ENST00000358544 OR1N2Q8NGR9 330 aa5.24□□□□□ -1.57
VPS13B-203ENST00000358544 LY75O60449 1722 aa5.24□□□□□ -1.57
VPS13B-203ENST00000358544 NRAPQ86VF7 1730 aa5.24□□□□□ -1.57
VPS13B-203ENST00000358544 A0A1W2PPE3 182 aa5.24□□□□□ -1.57
VPS13B-203ENST00000358544 POU2F2P09086 479 aa5.24□□□□□ -1.57
VPS13B-203ENST00000358544 SELENOTP62341 195 aa5.24□□□□□ -1.57
VPS13B-203ENST00000358544 MST1LQ2TV78 715 aa5.24□□□□□ -1.57
VPS13B-203ENST00000358544 ZNF766Q5HY98 468 aa5.24□□□□□ -1.57
VPS13B-203ENST00000358544 CBLN3Q6UW01 205 aa5.24□□□□□ -1.57
VPS13B-203ENST00000358544 TMEM108Q6UXF1 575 aa5.24□□□□□ -1.57
VPS13B-203ENST00000358544 TCF23Q7RTU1 214 aa5.24□□□□□ -1.57
VPS13B-203ENST00000358544 CEACAM5P06731 702 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms