RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 CENPWQ5EE01 88 aa5.39□□□□□ -1.55
VCAN-203ENST00000343200 ORMDL3Q8N138 153 aa5.39□□□□□ -1.55
VCAN-203ENST00000343200 PGLYRP3Q96LB9 341 aa5.39□□□□□ -1.55
VCAN-203ENST00000343200 ZNF714Q96N38 554 aa5.39□□□□□ -1.55
VCAN-203ENST00000343200 RTN4RQ9BZR6 473 aa5.39□□□□□ -1.55
VCAN-203ENST00000343200 LRP5O75197 1615 aa5.39□□□□□ -1.55
VCAN-203ENST00000343200 TMEM238C9JI98 176 aa5.39□□□□□ -1.55
VCAN-203ENST00000343200 F8W1H4 67 aa5.39□□□□□ -1.55
VCAN-203ENST00000343200 PF4V1P10720 104 aa5.39□□□□□ -1.55
VCAN-203ENST00000343200 GVQW1Q8N7I0 195 aa5.39□□□□□ -1.55
VCAN-203ENST00000343200 PXMP4Q9Y6I8 212 aa5.39□□□□□ -1.55
VCAN-203ENST00000343200 ZFHX2Q9C0A1 2572 aaPredicted RBP5.38□□□□□ -1.55
VCAN-203ENST00000343200 A0A0G2JLL6 359 aaPredicted RBP5.38□□□□□ -1.55
VCAN-203ENST00000343200 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.38□□□□□ -1.55
VCAN-203ENST00000343200 TNFSF13O75888 250 aa5.38□□□□□ -1.55
VCAN-203ENST00000343200 CD8AP01732 235 aa5.38□□□□□ -1.55
VCAN-203ENST00000343200 GABRG2P18507 467 aa5.38□□□□□ -1.55
VCAN-203ENST00000343200 NKG7Q16617 165 aa5.38□□□□□ -1.55
VCAN-203ENST00000343200 WDR38Q5JTN6 314 aa5.38□□□□□ -1.55
VCAN-203ENST00000343200 PRRT2Q7Z6L0 340 aaPredicted RBP5.38□□□□□ -1.55
VCAN-203ENST00000343200 TMEM178AQ8NBL3 297 aa5.38□□□□□ -1.55
VCAN-203ENST00000343200 ZNF296Q8WUU4 475 aaPredicted RBP5.38□□□□□ -1.55
VCAN-203ENST00000343200 TMEM174Q8WUU8 243 aa5.38□□□□□ -1.55
VCAN-203ENST00000343200 FMC1Q96HJ9 113 aa5.38□□□□□ -1.55
VCAN-203ENST00000343200 EMC6Q9BV81 110 aa5.38□□□□□ -1.55
VCAN-203ENST00000343200 GNB1LQ9BYB4 327 aa5.38□□□□□ -1.55
VCAN-203ENST00000343200 SLC25A15Q9Y619 301 aa5.38□□□□□ -1.55
VCAN-203ENST00000343200 A0A1B0GUT8 65 aa5.38□□□□□ -1.55
VCAN-203ENST00000343200 M0R2P5 195 aa5.38□□□□□ -1.55
VCAN-203ENST00000343200 PEX11BO96011 259 aa5.38□□□□□ -1.55
VCAN-203ENST00000343200 CD70P32970 193 aa5.38□□□□□ -1.55
VCAN-203ENST00000343200 GNB2P62879 340 aa5.38□□□□□ -1.55
VCAN-203ENST00000343200 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.38□□□□□ -1.55
VCAN-203ENST00000343200 GAPTQ8N292 157 aa5.38□□□□□ -1.55
VCAN-203ENST00000343200 OR11G2Q8NGC1 345 aa5.38□□□□□ -1.55
VCAN-203ENST00000343200 OR10J6PQ8NGY7 276 aa5.38□□□□□ -1.55
VCAN-203ENST00000343200 TMSB15BA0A087X1C1 80 aa5.38□□□□□ -1.55
VCAN-203ENST00000343200 A0A0B4J2E0 115 aa5.38□□□□□ -1.55
VCAN-203ENST00000343200 A0A1B0GX12 115 aa5.38□□□□□ -1.55
VCAN-203ENST00000343200 A0A1B0GX78 115 aa5.38□□□□□ -1.55
VCAN-203ENST00000343200 NRG2O14511 850 aaPredicted RBP5.38□□□□□ -1.55
VCAN-203ENST00000343200 NDUFA3O95167 84 aa5.38□□□□□ -1.55
VCAN-203ENST00000343200 CRPP02741 224 aa5.38□□□□□ -1.55
VCAN-203ENST00000343200 HOXC4P09017 264 aaPredicted RBP5.38□□□□□ -1.55
VCAN-203ENST00000343200 ASIPP42127 132 aa5.38□□□□□ -1.55
VCAN-203ENST00000343200 DCAF12Q5T6F0 453 aa5.38□□□□□ -1.55
VCAN-203ENST00000343200 RTN4RL2Q86UN3 420 aa5.38□□□□□ -1.55
VCAN-203ENST00000343200 ST6GALNAC6Q969X2 333 aa5.38□□□□□ -1.55
VCAN-203ENST00000343200 MS4A4AQ96JQ5 239 aa5.38□□□□□ -1.55
VCAN-203ENST00000343200 COA4Q9NYJ1 87 aa5.38□□□□□ -1.55
VCAN-203ENST00000343200 MLNRO43193 412 aa5.38□□□□□ -1.55
VCAN-203ENST00000343200 TGFAP01135 160 aa5.38□□□□□ -1.55
VCAN-203ENST00000343200 CA7P43166 264 aa5.38□□□□□ -1.55
VCAN-203ENST00000343200 SH3BGRL3Q9H299 93 aa5.38□□□□□ -1.55
VCAN-203ENST00000343200 ANKRD17O75179 2603 aaKnown RBP5.38□□□□□ -1.55
VCAN-203ENST00000343200 H7C1H1 209 aa5.38□□□□□ -1.55
VCAN-203ENST00000343200 MDKP21741 143 aaPredicted RBP5.38□□□□□ -1.55
VCAN-203ENST00000343200 NXPH1P58417 271 aa5.38□□□□□ -1.55
VCAN-203ENST00000343200 IDSB3KWA1 339 aa5.38□□□□□ -1.55
VCAN-203ENST00000343200 DPM2O94777 84 aa5.38□□□□□ -1.55
VCAN-203ENST00000343200 ETHE1O95571 254 aa5.38□□□□□ -1.55
VCAN-203ENST00000343200 TIMP1P01033 207 aa5.38□□□□□ -1.55
VCAN-203ENST00000343200 GPR82Q96P67 336 aa5.38□□□□□ -1.55
VCAN-203ENST00000343200 KLK15Q9H2R5 256 aa5.38□□□□□ -1.55
VCAN-203ENST00000343200 RNF122Q9H9V4 155 aa5.38□□□□□ -1.55
VCAN-203ENST00000343200 TRBV20-1A0A075B6N2 111 aa5.38□□□□□ -1.55
VCAN-203ENST00000343200 SERF1AO75920 110 aa5.38□□□□□ -1.55
VCAN-203ENST00000343200 INAFM2P0DMQ5 153 aa5.38□□□□□ -1.55
VCAN-203ENST00000343200 PSG2P11465 335 aa5.38□□□□□ -1.55
VCAN-203ENST00000343200 ARSAP15289 507 aa5.38□□□□□ -1.55
VCAN-203ENST00000343200 HTN1P15515 57 aa5.38□□□□□ -1.55
VCAN-203ENST00000343200 GPX4P36969 197 aaPredicted RBP5.38□□□□□ -1.55
VCAN-203ENST00000343200 TMEM144Q7Z5S9 345 aa5.38□□□□□ -1.55
VCAN-203ENST00000343200 C17orf47Q8NEP4 570 aa5.38□□□□□ -1.55
VCAN-203ENST00000343200 WDYHV1Q96HA8 205 aa5.38□□□□□ -1.55
VCAN-203ENST00000343200 B9D1Q9UPM9 204 aa5.38□□□□□ -1.55
VCAN-203ENST00000343200 HLA-DQB1P01920 261 aa5.37□□□□□ -1.55
VCAN-203ENST00000343200 RND3P61587 244 aa5.37□□□□□ -1.55
VCAN-203ENST00000343200 SOSTQ9BQB4 213 aa5.37□□□□□ -1.55
VCAN-203ENST00000343200 NXT2Q9NPJ8 142 aaKnown RBP5.37□□□□□ -1.55
VCAN-203ENST00000343200 HILPDAQ9Y5L2 63 aa5.37□□□□□ -1.55
VCAN-203ENST00000343200 HIGD1CA8MV81 97 aa5.37□□□□□ -1.55
VCAN-203ENST00000343200 FGF17O60258 216 aa5.37□□□□□ -1.55
VCAN-203ENST00000343200 HYPMO75409 117 aa5.37□□□□□ -1.55
VCAN-203ENST00000343200 TSPOP30536 169 aa5.37□□□□□ -1.55
VCAN-203ENST00000343200 GLIS2Q9BZE0 524 aaPredicted RBP5.37□□□□□ -1.55
VCAN-203ENST00000343200 OR2H1Q9GZK4 316 aa5.37□□□□□ -1.55
VCAN-203ENST00000343200 C6orf106Q9H6K1 298 aaPredicted RBP5.37□□□□□ -1.55
VCAN-203ENST00000343200 PSMB11A5LHX3 300 aa5.37□□□□□ -1.55
VCAN-203ENST00000343200 PSG1P11464 419 aa5.37□□□□□ -1.55
VCAN-203ENST00000343200 ZNF707Q96C28 371 aaPredicted RBP5.37□□□□□ -1.55
VCAN-203ENST00000343200 NPVFQ9HCQ7 196 aa5.37□□□□□ -1.55
VCAN-203ENST00000343200 PPIL1Q9Y3C6 166 aa5.37□□□□□ -1.55
VCAN-203ENST00000343200 HS3ST3B1Q9Y662 390 aa5.37□□□□□ -1.55
VCAN-203ENST00000343200 DEFB108AA8MXU0 73 aa5.37□□□□□ -1.55
VCAN-203ENST00000343200 PLA2G10O15496 165 aa5.37□□□□□ -1.55
VCAN-203ENST00000343200 CDKN1BP46527 198 aa5.37□□□□□ -1.55
VCAN-203ENST00000343200 NPC2P61916 151 aa5.37□□□□□ -1.55
VCAN-203ENST00000343200 GOLT1AQ6ZVE7 132 aa5.37□□□□□ -1.55
VCAN-203ENST00000343200 LYZL2Q7Z4W2 148 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms