RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 WASF3Q9UPY6 502 aa15.7■□□□□ 0.1
RFTN1-201ENST00000334133 FAM90A26D6RGX4 464 aa15.7■□□□□ 0.1
RFTN1-201ENST00000334133 TIMM23BQ5SRD1 257 aa15.7■□□□□ 0.1
RFTN1-201ENST00000334133 DPPA3Q6W0C5 159 aa15.7■□□□□ 0.1
RFTN1-201ENST00000334133 Q8WTZ3 238 aa15.7■□□□□ 0.1
RFTN1-201ENST00000334133 COL8A2P25067 703 aa15.69■□□□□ 0.1
RFTN1-201ENST00000334133 C1orf185Q5T7R7 199 aa15.69■□□□□ 0.1
RFTN1-201ENST00000334133 NBASA2RRP1 2371 aa15.69■□□□□ 0.1
RFTN1-201ENST00000334133 PMS2P5A8MQ11 134 aa15.69■□□□□ 0.1
RFTN1-201ENST00000334133 GCSAMLQ5JQS6 135 aa15.69■□□□□ 0.1
RFTN1-201ENST00000334133 PRAMEF5Q5TYX0 476 aa15.69■□□□□ 0.1
RFTN1-201ENST00000334133 Q6ZS92 163 aa15.69■□□□□ 0.1
RFTN1-201ENST00000334133 SNIP1Q8TAD8 396 aaKnown RBP15.69■□□□□ 0.1
RFTN1-201ENST00000334133 HSD17B10Q99714 261 aaKnown RBP15.69■□□□□ 0.1
RFTN1-201ENST00000334133 ZNRD1Q9P1U0 126 aa15.69■□□□□ 0.1
RFTN1-201ENST00000334133 SMCO3A2RU48 225 aa15.69■□□□□ 0.1
RFTN1-201ENST00000334133 RAB29O14966 203 aa15.69■□□□□ 0.1
RFTN1-201ENST00000334133 SERF2P84101 59 aa15.69■□□□□ 0.1
RFTN1-201ENST00000334133 RNF212Q495C1 297 aa15.69■□□□□ 0.1
RFTN1-201ENST00000334133 FFAR4Q5NUL3 377 aa15.69■□□□□ 0.1
RFTN1-201ENST00000334133 SLC16A13Q7RTY0 426 aa15.69■□□□□ 0.1
RFTN1-201ENST00000334133 KDF1Q8NAX2 398 aaPredicted RBP15.69■□□□□ 0.1
RFTN1-201ENST00000334133 CA5BP1Q8WTZ4 195 aa15.69■□□□□ 0.1
RFTN1-201ENST00000334133 TET2Q6N021 2002 aaPredicted RBP15.68■□□□□ 0.1
RFTN1-201ENST00000334133 TNCP24821 2201 aa15.68■□□□□ 0.1
RFTN1-201ENST00000334133 SPTA1P02549 2419 aa15.68■□□□□ 0.1
RFTN1-201ENST00000334133 TRAV1-1A0A0B4J248 108 aa15.68■□□□□ 0.1
RFTN1-201ENST00000334133 MGST3O14880 152 aa15.68■□□□□ 0.1
RFTN1-201ENST00000334133 MBD3L1Q8WWY6 194 aa15.68■□□□□ 0.1
RFTN1-201ENST00000334133 CUL9Q8IWT3 2517 aa15.68■□□□□ 0.1
RFTN1-201ENST00000334133 TLN1Q9Y490 2541 aaKnown RBP15.68■□□□□ 0.1
RFTN1-201ENST00000334133 C5orf52A6NGY3 159 aa15.68■□□□□ 0.1
RFTN1-201ENST00000334133 ADH4P08319 380 aa15.68■□□□□ 0.1
RFTN1-201ENST00000334133 LOXL3P58215 753 aa15.68■□□□□ 0.1
RFTN1-201ENST00000334133 NCMAPQ5T1S8 102 aa15.68■□□□□ 0.1
RFTN1-201ENST00000334133 ZNF66Q6ZN08 573 aa15.68■□□□□ 0.1
RFTN1-201ENST00000334133 SNX22Q96L94 193 aa15.68■□□□□ 0.1
RFTN1-201ENST00000334133 SSX3Q99909 188 aa15.68■□□□□ 0.1
RFTN1-201ENST00000334133 GZMHP20718 246 aa15.67■□□□□ 0.1
RFTN1-201ENST00000334133 GLRXP35754 106 aa15.67■□□□□ 0.1
RFTN1-201ENST00000334133 GNG10P50151 68 aa15.67■□□□□ 0.1
RFTN1-201ENST00000334133 HTD2P86397 168 aa15.67■□□□□ 0.1
RFTN1-201ENST00000334133 HEPN1Q6WQI6 88 aa15.67■□□□□ 0.1
RFTN1-201ENST00000334133 OR10G4Q8NGN3 311 aa15.67■□□□□ 0.1
RFTN1-201ENST00000334133 OR10G9Q8NGN4 311 aa15.67■□□□□ 0.1
RFTN1-201ENST00000334133 OR10G7Q8NGN6 311 aa15.67■□□□□ 0.1
RFTN1-201ENST00000334133 CCL13Q99616 98 aa15.67■□□□□ 0.1
RFTN1-201ENST00000334133 TMEM147Q9BVK8 224 aa15.67■□□□□ 0.1
RFTN1-201ENST00000334133 NKX6-1P78426 367 aaPredicted RBP15.67■□□□□ 0.1
RFTN1-201ENST00000334133 ELOBQ15370 118 aa15.67■□□□□ 0.1
RFTN1-201ENST00000334133 EDARADDQ8WWZ3 215 aa15.67■□□□□ 0.1
RFTN1-201ENST00000334133 RPUSD4Q96CM3 377 aaKnown RBP15.67■□□□□ 0.1
RFTN1-201ENST00000334133 YPEL4Q96NS1 127 aa15.67■□□□□ 0.1
RFTN1-201ENST00000334133 CALYQ9NYX4 217 aa15.67■□□□□ 0.1
RFTN1-201ENST00000334133 CISD1Q9NZ45 108 aaKnown RBP15.67■□□□□ 0.1
RFTN1-201ENST00000334133 GYPAP02724 150 aa15.66■□□□□ 0.1
RFTN1-201ENST00000334133 TUBG1P23258 451 aa15.66■□□□□ 0.1
RFTN1-201ENST00000334133 CCL8P80075 99 aa15.66■□□□□ 0.1
RFTN1-201ENST00000334133 FAM216BQ8N7L0 139 aa15.66■□□□□ 0.1
RFTN1-201ENST00000334133 TOLLIPQ9H0E2 274 aa15.66■□□□□ 0.1
RFTN1-201ENST00000334133 TUBG2Q9NRH3 451 aa15.66■□□□□ 0.1
RFTN1-201ENST00000334133 TPRP12270 2363 aaKnown RBP15.66■□□□□ 0.1
RFTN1-201ENST00000334133 IFNA10P01566 189 aa15.66■□□□□ 0.1
RFTN1-201ENST00000334133 MYOD1P15172 320 aa15.66■□□□□ 0.1
RFTN1-201ENST00000334133 MDKP21741 143 aaPredicted RBP15.66■□□□□ 0.1
RFTN1-201ENST00000334133 FAM90A1Q86YD7 464 aa15.66■□□□□ 0.1
RFTN1-201ENST00000334133 ABHD12Q8N2K0 398 aa15.66■□□□□ 0.1
RFTN1-201ENST00000334133 NPCDR1Q9BY65 106 aa15.66■□□□□ 0.1
RFTN1-201ENST00000334133 IFI27L2Q9H2X8 130 aa15.66■□□□□ 0.1
RFTN1-201ENST00000334133 C15orf62A8K5M9 175 aa15.66■□□□□ 0.1
RFTN1-201ENST00000334133 MEOX2P50222 304 aa15.66■□□□□ 0.1
RFTN1-201ENST00000334133 MZT1Q08AG7 82 aa15.66■□□□□ 0.1
RFTN1-201ENST00000334133 IGFL3Q6UXB1 125 aa15.66■□□□□ 0.1
RFTN1-201ENST00000334133 PRSS33Q8NF86 280 aa15.66■□□□□ 0.1
RFTN1-201ENST00000334133 GCM1Q9NP62 436 aa15.66■□□□□ 0.1
RFTN1-201ENST00000334133 CYB5BO43169 146 aa15.65■□□□□ 0.1
RFTN1-201ENST00000334133 TNFAIP6P98066 277 aaPredicted RBP15.65■□□□□ 0.1
RFTN1-201ENST00000334133 OR4A16Q8NH70 328 aa15.65■□□□□ 0.1
RFTN1-201ENST00000334133 PINX1Q96BK5 328 aaKnown RBP15.65■□□□□ 0.1
RFTN1-201ENST00000334133 TACC2O95359 2948 aa15.65■□□□□ 0.1
RFTN1-201ENST00000334133 RRHO14718 337 aa15.65■□□□□ 0.1
RFTN1-201ENST00000334133 MMP23AO75900 390 aa15.65■□□□□ 0.1
RFTN1-201ENST00000334133 HEYLQ9NQ87 328 aaPredicted RBP15.65■□□□□ 0.1
RFTN1-201ENST00000334133 OR6C3Q9NZP0 311 aa15.65■□□□□ 0.1
RFTN1-201ENST00000334133 VAX2Q9UIW0 290 aa15.65■□□□□ 0.1
RFTN1-201ENST00000334133 IGHV1-46P01743 117 aa15.64■□□□□ 0.09
RFTN1-201ENST00000334133 OPN1MWP04001 364 aa15.64■□□□□ 0.09
RFTN1-201ENST00000334133 OR8U8P0C7N1 319 aa15.64■□□□□ 0.09
RFTN1-201ENST00000334133 OPN1MW2P0DN77 364 aa15.64■□□□□ 0.09
RFTN1-201ENST00000334133 OPN1MW3P0DN78 364 aa15.64■□□□□ 0.09
RFTN1-201ENST00000334133 CD81P60033 236 aa15.64■□□□□ 0.09
RFTN1-201ENST00000334133 CT45A1Q5HYN5 189 aa15.64■□□□□ 0.09
RFTN1-201ENST00000334133 WFDC8Q8IUA0 241 aa15.64■□□□□ 0.09
RFTN1-201ENST00000334133 CISD2Q8N5K1 135 aaKnown RBP15.64■□□□□ 0.09
RFTN1-201ENST00000334133 ZNF709Q8N972 641 aa15.64■□□□□ 0.09
RFTN1-201ENST00000334133 CT45A3Q8NHU0 189 aa15.64■□□□□ 0.09
RFTN1-201ENST00000334133 PPP1R35Q8TAP8 253 aa15.64■□□□□ 0.09
RFTN1-201ENST00000334133 NANPQ8TBE9 248 aa15.64■□□□□ 0.09
RFTN1-201ENST00000334133 TRAV38-1A0A0B4J264 116 aa15.64■□□□□ 0.09
RFTN1-201ENST00000334133 A0A1B0GWJ7 208 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms