RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 ABLIM2Q6H8Q1 611 aa9.09□□□□□ -0.96
SYNPO2-201ENST00000307142 SLC25A33Q9BSK2 321 aa9.09□□□□□ -0.96
SYNPO2-201ENST00000307142 PRSS22Q9GZN4 317 aa9.09□□□□□ -0.96
SYNPO2-201ENST00000307142 TMSB15BA0A087X1C1 80 aa9.08□□□□□ -0.96
SYNPO2-201ENST00000307142 OR2T8A6NH00 312 aa9.08□□□□□ -0.96
SYNPO2-201ENST00000307142 ALPK2Q86TB3 2170 aa9.08□□□□□ -0.96
SYNPO2-201ENST00000307142 KLF4O43474 513 aa9.08□□□□□ -0.96
SYNPO2-201ENST00000307142 MBPP02686 304 aaPredicted RBP9.08□□□□□ -0.96
SYNPO2-201ENST00000307142 CAMPP49913 170 aa9.08□□□□□ -0.96
SYNPO2-201ENST00000307142 SPANXN1Q5VSR9 72 aa9.08□□□□□ -0.96
SYNPO2-201ENST00000307142 C17orf82Q86X59 251 aaPredicted RBP9.08□□□□□ -0.96
SYNPO2-201ENST00000307142 C1QTNF5Q9BXJ0 243 aa9.08□□□□□ -0.96
SYNPO2-201ENST00000307142 LPAR5Q9H1C0 372 aa9.08□□□□□ -0.96
SYNPO2-201ENST00000307142 RBKSQ9H477 322 aa9.08□□□□□ -0.96
SYNPO2-201ENST00000307142 TRAV30A0A087WSZ9 112 aa9.08□□□□□ -0.96
SYNPO2-201ENST00000307142 CXorf1O96002 111 aa9.08□□□□□ -0.96
SYNPO2-201ENST00000307142 SPCS3P61009 180 aa9.08□□□□□ -0.96
SYNPO2-201ENST00000307142 LGALSLQ3ZCW2 172 aaPredicted RBP9.08□□□□□ -0.96
SYNPO2-201ENST00000307142 RPL39P5Q59GN2 51 aa9.08□□□□□ -0.96
SYNPO2-201ENST00000307142 NPVFQ9HCQ7 196 aa9.08□□□□□ -0.96
SYNPO2-201ENST00000307142 IGSF23A1L1A6 192 aa9.08□□□□□ -0.96
SYNPO2-201ENST00000307142 GUK1Q16774 197 aa9.08□□□□□ -0.96
SYNPO2-201ENST00000307142 LRRC75BQ2VPJ9 315 aa9.08□□□□□ -0.96
SYNPO2-201ENST00000307142 PLA2G2CQ5R387 149 aa9.08□□□□□ -0.96
SYNPO2-201ENST00000307142 FAM157CP0CG43 387 aa9.08□□□□□ -0.96
SYNPO2-201ENST00000307142 NPPCP23582 126 aa9.08□□□□□ -0.96
SYNPO2-201ENST00000307142 CD1BP29016 333 aa9.08□□□□□ -0.96
SYNPO2-201ENST00000307142 TMEM241Q24JQ0 296 aa9.08□□□□□ -0.96
SYNPO2-201ENST00000307142 PRSS3P2Q8NHM4 247 aa9.08□□□□□ -0.96
SYNPO2-201ENST00000307142 ITLN2Q8WWU7 325 aaPredicted RBP9.08□□□□□ -0.96
SYNPO2-201ENST00000307142 TUBD1Q9UJT1 453 aa9.08□□□□□ -0.96
SYNPO2-201ENST00000307142 IGHV3-66A0A0C4DH42 116 aa9.07□□□□□ -0.96
SYNPO2-201ENST00000307142 LOC390937A0A1W2PQ73 354 aa9.07□□□□□ -0.96
SYNPO2-201ENST00000307142 PLAUP00749 431 aa9.07□□□□□ -0.96
SYNPO2-201ENST00000307142 SULT1A1P50225 295 aa9.07□□□□□ -0.96
SYNPO2-201ENST00000307142 PPP1R27Q86WC6 154 aa9.07□□□□□ -0.96
SYNPO2-201ENST00000307142 SYT8Q8NBV8 401 aa9.07□□□□□ -0.96
SYNPO2-201ENST00000307142 A0A0G2JLM5 398 aa9.07□□□□□ -0.96
SYNPO2-201ENST00000307142 TRBV5-5A0A0J9YX44 114 aa9.07□□□□□ -0.96
SYNPO2-201ENST00000307142 C11orf94C9JXX5 98 aa9.07□□□□□ -0.96
SYNPO2-201ENST00000307142 PGLYRP1O75594 196 aaPredicted RBP9.07□□□□□ -0.96
SYNPO2-201ENST00000307142 RNF224P0DH78 156 aa9.07□□□□□ -0.96
SYNPO2-201ENST00000307142 FBXL15Q9H469 300 aa9.07□□□□□ -0.96
SYNPO2-201ENST00000307142 TRAPPC1Q9Y5R8 145 aa9.07□□□□□ -0.96
SYNPO2-201ENST00000307142 RGS13O14921 159 aa9.07□□□□□ -0.96
SYNPO2-201ENST00000307142 IGHV3-48P01763 117 aa9.07□□□□□ -0.96
SYNPO2-201ENST00000307142 FOXB2Q5VYV0 432 aa9.07□□□□□ -0.96
SYNPO2-201ENST00000307142 GBGT1Q8N5D6 347 aa9.07□□□□□ -0.96
SYNPO2-201ENST00000307142 GSX2Q9BZM3 304 aa9.07□□□□□ -0.96
SYNPO2-201ENST00000307142 DEDDO75618 318 aa9.07□□□□□ -0.96
SYNPO2-201ENST00000307142 EFNA4P52798 201 aa9.07□□□□□ -0.96
SYNPO2-201ENST00000307142 POC1AQ8NBT0 407 aa9.07□□□□□ -0.96
SYNPO2-201ENST00000307142 S4R3C0 116 aa9.07□□□□□ -0.96
SYNPO2-201ENST00000307142 RIF1Q5UIP0 2472 aaKnown RBP9.07□□□□□ -0.96
SYNPO2-201ENST00000307142 CD1AP06126 327 aa9.07□□□□□ -0.96
SYNPO2-201ENST00000307142 COMPP49747 757 aaPredicted RBP9.07□□□□□ -0.96
SYNPO2-201ENST00000307142 EWSR1Q01844 656 aaKnown RBP eCLIP9.07□□□□□ -0.96
SYNPO2-201ENST00000307142 TCF15Q12870 199 aa9.07□□□□□ -0.96
SYNPO2-201ENST00000307142 RTN4RQ9BZR6 473 aa9.07□□□□□ -0.96
SYNPO2-201ENST00000307142 ZNF207O43670 478 aaKnown RBP9.06□□□□□ -0.96
SYNPO2-201ENST00000307142 SRSF10O75494 262 aaKnown RBP9.06□□□□□ -0.96
SYNPO2-201ENST00000307142 SFTA3P0C7M3 94 aa9.06□□□□□ -0.96
SYNPO2-201ENST00000307142 FDX2Q6P4F2 183 aa9.06□□□□□ -0.96
SYNPO2-201ENST00000307142 Q6ZS92 163 aa9.06□□□□□ -0.96
SYNPO2-201ENST00000307142 LSM10Q969L4 123 aaKnown RBP9.06□□□□□ -0.96
SYNPO2-201ENST00000307142 NRIP2Q9BQI9 281 aa9.06□□□□□ -0.96
SYNPO2-201ENST00000307142 LINC00869P0C866 280 aa9.06□□□□□ -0.96
SYNPO2-201ENST00000307142 ZNF705AQ6ZN79 300 aaPredicted RBP9.06□□□□□ -0.96
SYNPO2-201ENST00000307142 FGFRL1Q8N441 504 aa9.06□□□□□ -0.96
SYNPO2-201ENST00000307142 S1PR2O95136 353 aa9.06□□□□□ -0.96
SYNPO2-201ENST00000307142 RNASEKQ6P5S7 137 aaKnown RBP9.06□□□□□ -0.96
SYNPO2-201ENST00000307142 Q96M66 194 aa9.06□□□□□ -0.96
SYNPO2-201ENST00000307142 NOL4LQ96MY1 436 aaPredicted RBP9.06□□□□□ -0.96
SYNPO2-201ENST00000307142 TCEAL7Q9BRU2 100 aa9.06□□□□□ -0.96
SYNPO2-201ENST00000307142 TMEM204Q9BSN7 226 aa9.06□□□□□ -0.96
SYNPO2-201ENST00000307142 PLSCR4Q9NRQ2 329 aa9.06□□□□□ -0.96
SYNPO2-201ENST00000307142 NAT8BQ9UHF3 227 aa9.06□□□□□ -0.96
SYNPO2-201ENST00000307142 MARCH11A6NNE9 402 aa9.06□□□□□ -0.96
SYNPO2-201ENST00000307142 OR10J1P30954 320 aa9.06□□□□□ -0.96
SYNPO2-201ENST00000307142 RND2P52198 227 aa9.06□□□□□ -0.96
SYNPO2-201ENST00000307142 IRF3Q14653 427 aa9.06□□□□□ -0.96
SYNPO2-201ENST00000307142 TWIST1Q15672 202 aa9.06□□□□□ -0.96
SYNPO2-201ENST00000307142 MDS2Q8NDY4 140 aa9.06□□□□□ -0.96
SYNPO2-201ENST00000307142 ARPC1AQ92747 370 aa9.06□□□□□ -0.96
SYNPO2-201ENST00000307142 MMP26Q9NRE1 261 aa9.06□□□□□ -0.96
SYNPO2-201ENST00000307142 DUXBA0A1W2PPF3 345 aa9.06□□□□□ -0.96
SYNPO2-201ENST00000307142 ZNF672Q499Z4 452 aaPredicted RBP9.06□□□□□ -0.96
SYNPO2-201ENST00000307142 TMEM255AQ5JRV8 349 aa9.06□□□□□ -0.96
SYNPO2-201ENST00000307142 IL36RNQ9UBH0 155 aa9.06□□□□□ -0.96
SYNPO2-201ENST00000307142 NPIPB9F8W1W9 429 aa9.06□□□□□ -0.96
SYNPO2-201ENST00000307142 CDS2O95674 445 aa9.06□□□□□ -0.96
SYNPO2-201ENST00000307142 DRAM1Q8N682 238 aa9.06□□□□□ -0.96
SYNPO2-201ENST00000307142 BMPERQ8N8U9 685 aa9.06□□□□□ -0.96
SYNPO2-201ENST00000307142 MED12Q93074 2177 aa9.05□□□□□ -0.96
SYNPO2-201ENST00000307142 IGHV3-49A0A0A0MS15 119 aa9.05□□□□□ -0.96
SYNPO2-201ENST00000307142 MFSD2BA6NFX1 497 aa9.05□□□□□ -0.96
SYNPO2-201ENST00000307142 TCTE3Q8IZS6 198 aa9.05□□□□□ -0.96
SYNPO2-201ENST00000307142 C8orf46Q8TAG6 207 aa9.05□□□□□ -0.96
SYNPO2-201ENST00000307142 HSF4Q9ULV5 492 aa9.05□□□□□ -0.96
SYNPO2-201ENST00000307142 PXMP4Q9Y6I8 212 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms